Sample Metadata
2189573031
General
| Taxon Oid |
2189573031
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Apis mellifera gut microbial communities from the Carl Hayden Bee Research Center, Tuscon, Arizona, USA |
| Genome Name Sample Name |
Gamma-1 phylotype from Apis mellifera gut collected at the Carl Hayden Bee Research Center, Tucson, AZ. |
| Img Genome Id |
2189573031 |
Project / Publication
| Gold Analysis Project Id |
Ga0010982
|
| Gold Sequencing Project Id |
Gp0052893
|
| Gold Study Id |
Gs0048557
|
| Is Published |
0 |
| Add Date |
07/05/2011 |
| Public Release Date |
11/01/2019 |
Environment / Ecosystem
| Ecosystem |
Host-associated |
| Ecosystem Category |
Arthropoda: Insects |
| Ecosystem Subtype |
Hindgut |
| Ecosystem Type |
Digestive system |
| Specific Ecosystem |
Unclassified |
| Habitat |
Apis mellifera gut |
Sampling / Conditions
| Geographic Location |
USA: Bethesda, Maryland |
| Isolation Country |
8855 |
| Latitude |
39.0043 |
| Longitude |
-77.1012 |
| Sample Collection Date |
2010/10/5 |
Assembly
| Genome Size Assembled |
15778121 |
| Gene Count Assembled |
18477 |
| Sequencing Strategy |
Metagenome |
Other Metadata
| Alt2 Contact Emails |
[email protected] |
| Alt2 Contact Names |
Vince Martinson |
| Assembly Method |
Velvet v. 1.1.04 |
| Comments |
released per JGI data release policy |
| Contact Email |
[email protected] |
| Contact Name |
Vince Martinson |
| Cultured |
0 |
| Elevation In Meters |
720.000000 |
| Gold Analysis Project Type |
Metagenome Analysis |
| Has Coverage |
0 |
| High Quality |
1 |
| Host Name |
Apis mellifera mellifera |
| Img Submission Id |
5678 |
| In File |
Yes |
| Isolation |
Carl Hayden Bee Research Center, Tucson, AZ |
| Rnd Project |
1 |
| Sample Body Site |
Gastrointestinal tract |
| Sample Body Subsite |
Rectal |
| Sequencing Center |
Yale University |
| Sequencing Method |
Illumina GAIIx |
| Sequencing Quality |
Level 1: Standard Draft |
| Submission Type |
Primary |
| Submitter Name |
Vince Martinson |