Sample 3300034522

Basic Information
IMG/M Taxon OID	3300034522 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118431 \| Gp0324332 \| Ga0310142
Sample Name	Fracking water microbial communities from deep shales in Oklahoma, United States - K-3-A
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300034522 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0118431 | Gp0324332 | Ga0310142

Sample Name

Fracking water microbial communities from deep shales in Oklahoma, United States - K-3-A

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	0
Sequencing Scaffolds	26
Novel Protein Genes	32
Associated Families	32

Dataset Contents

Total Genome Size

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3
All Organisms → cellular organisms → Eukaryota	1
Not Available	21
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Eukaryota

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium

Ecosystem Assignment (GOLD)
Name	Subsurface Microbial Communities From Deep Shales In Ohio And West Virginia, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water → Subsurface Microbial Communities From Deep Shales In Ohio And West Virginia, Usa

Ecosystem Assignment (GOLD)

Name

Subsurface Microbial Communities From Deep Shales In Ohio And West Virginia, Usa

Type

Environmental

Taxonomy

Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water → Subsurface Microbial Communities From Deep Shales In Ohio And West Virginia, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → planetary subsurface zone → fracking liquid
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

terrestrial biome → planetary subsurface zone → fracking liquid

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	USA: Oklahoma
Coordinates	Lat. (^o)	35.812	Long. (^o)	-98.262	Alt. (m)	N/A	Depth (m)	2943
Location on Map

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Location Information

Location

USA: Oklahoma

Coordinates

Lat. (^o)

35.812

Long. (^o)

-98.262

Alt. (m)

N/A

Depth (m)

2943

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001989	Metagenome / Metatranscriptome	607	Y
F002353	Metagenome / Metatranscriptome	567	Y
F004315	Metagenome / Metatranscriptome	444	Y
F006051	Metagenome / Metatranscriptome	382	Y
F007222	Metagenome / Metatranscriptome	355	Y
F008069	Metagenome / Metatranscriptome	339	N
F008751	Metagenome / Metatranscriptome	328	Y
F012550	Metagenome	279	Y
F014015	Metagenome	266	Y
F014089	Metagenome / Metatranscriptome	266	Y
F014708	Metagenome / Metatranscriptome	260	Y
F018650	Metagenome / Metatranscriptome	234	N
F021715	Metagenome / Metatranscriptome	217	N
F023783	Metagenome	208	Y
F025445	Metagenome / Metatranscriptome	201	N
F027111	Metagenome / Metatranscriptome	195	N
F029991	Metagenome / Metatranscriptome	186	N
F030997	Metagenome / Metatranscriptome	183	N
F033645	Metagenome / Metatranscriptome	177	Y
F036106	Metagenome / Metatranscriptome	170	N
F037494	Metagenome	168	N
F038121	Metagenome / Metatranscriptome	166	N
F045531	Metagenome / Metatranscriptome	152	N
F046199	Metagenome / Metatranscriptome	151	N
F053089	Metagenome / Metatranscriptome	141	N
F053090	Metagenome / Metatranscriptome	141	N
F054598	Metagenome / Metatranscriptome	139	N
F066479	Metagenome / Metatranscriptome	126	N
F076911	Metagenome / Metatranscriptome	117	N
F079377	Metagenome / Metatranscriptome	116	N
F079597	Metagenome / Metatranscriptome	115	N
F102145	Metagenome / Metatranscriptome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0310142_00681	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14262	Open in IMG/M
Ga0310142_03446	All Organisms → cellular organisms → Eukaryota	2577	Open in IMG/M
Ga0310142_04067	Not Available	2126	Open in IMG/M
Ga0310142_05506	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1531	Open in IMG/M
Ga0310142_06840	Not Available	1235	Open in IMG/M
Ga0310142_07714	Not Available	1103	Open in IMG/M
Ga0310142_08344	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1024	Open in IMG/M
Ga0310142_10024	Not Available	878	Open in IMG/M
Ga0310142_11090	Not Available	813	Open in IMG/M
Ga0310142_12637	Not Available	732	Open in IMG/M
Ga0310142_12703	Not Available	729	Open in IMG/M
Ga0310142_12762	Not Available	726	Open in IMG/M
Ga0310142_14138	Not Available	669	Open in IMG/M
Ga0310142_14545	Not Available	656	Open in IMG/M
Ga0310142_15428	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	627	Open in IMG/M
Ga0310142_15480	Not Available	625	Open in IMG/M
Ga0310142_16242	Not Available	602	Open in IMG/M
Ga0310142_16309	Not Available	600	Open in IMG/M
Ga0310142_18574	Not Available	545	Open in IMG/M
Ga0310142_18609	Not Available	544	Open in IMG/M
Ga0310142_18968	Not Available	535	Open in IMG/M
Ga0310142_19464	Not Available	524	Open in IMG/M
Ga0310142_19547	Not Available	522	Open in IMG/M
Ga0310142_19919	Not Available	514	Open in IMG/M
Ga0310142_19949	Not Available	514	Open in IMG/M
Ga0310142_20398	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0310142_00681	Ga0310142_00681_1143_1637	F037494	MKVKPTIEDKVLAHTVALERIAQIQGHPDASSRYDRQLGFHDYVAQVAESIVAEILVARYLGYIDFDPRSSQFKKTADVGSFIEVKWTRYESGQLIVYENDRQTDVAILVVGTSPNYRLAGWIPVAMAKRPKYKNSKQPTWWVDQKNLQPIENLKGSNYGQAAL
Ga0310142_00681	Ga0310142_00681_1634_1846	F014089	VEATGIKMSDLIEIIYPQSMTAKLLQNGEVIAEYKIEQCDSCAKLKKLDAFGYTKGQGGEKLTWLCGDCR
Ga0310142_00681	Ga0310142_00681_1828_2490	F033645	MSFLDNYEDVAARIARLWLTHPTARVQTNIIDFNAEKGYVLIQAQIFREYEDLQPSATDYAFGNVATYNVNMKKFFVEDTVTSAIGRAIGLLLGSDKRPTRQDMEKVETISAKVANSTADDYDPWTQKFGEVPSYKTAEEAEQSGIPSLGSSMDEIKKQLGGELVAEAPQCGHGHRIFKTGEAKTGKAWGGWFCVEKAKADQCTPLWYVLASDGKWKPQV
Ga0310142_00681	Ga0310142_00681_7622_8158	F007222	MADTKGRGTYAITVDPYEFKNLLGLLGSFPAEYQQLVRDRAQPMSQRLAGQLMMSGLSAPAPQTKLVVQTIKSPRDRLIRVDIGGPKKVGRPYGGEASKSGKGKVRRQAAPAGALLWGTEYGSHGGVDSIGRTFTNRFKTPYNKRGYWIAPAVDFYVPVVAREYALMVQQIAKELRLN
Ga0310142_03446	Ga0310142_03446_24_707	F018650	MDEYFSLEELRCQVMSIIRHRAQLSNHNVIVLEDQELQMVFDSWYIFVPDVENHLLAHVIPAPADISNDLQNKHMTEEFYINSPVDLLYKDPSSVFWILPFVDFAMNQSTGNVRSWKKLLFMFTKFCLNNTTYFTRVSDSIIRINENTCLTSLFGFKYFHRSQIEHLLKKITKFLGRKNSMVQSCHFIKHNPVFNKTTKHQNVFAFIDDIINKNNDMMPDFQTGLYI
Ga0310142_04067	Ga0310142_04067_1472_2065	F102145	MDTEQQKSSETLLYNFDYPMVTECGAVKITADRVILQFPEKPTVYVENSVTLRRNVTLRIENFPGFSIDRIPIHTRKDFFRVKEMIEKCLQSYSYLISKTYFSPHSDWFNSIKYYKTLSTEFFTSNTFHLSCFEHTFITCIELSVINKECDEKEIPLHFQLCIGKHVVFCTERDLKCVTQAETVHFIVRFILYFKSC
Ga0310142_05506	Ga0310142_05506_3_473	F038121	MKYLLISIFLLACNPVKQVLRDKEKFDQVAKKVVESGLYCANDTIIQSKSDTLITYDTIYEKNDIIRNILRTDTLRLSFTKTLVKTIRITDTIQKAVIDNARINQLEAKLALQTEKTEEYKAKANSRLKWLVLLIIAICVRILYKPIKKFILWHFSP
Ga0310142_05506	Ga0310142_05506_654_872	F008751	MTDLVLFLVGQAIAILVGLISIYVKVSLKLKELEIRVSVVEKQDDQISRKLDTIAHQLNTLSIQLQNKQDRE
Ga0310142_06840	Ga0310142_06840_76_438	F002353	VVFPVLVADVDVREDSIFIRLRKEEVVCEDQDTSKRVSSSDVLEPVVEKVPEIGSEVTVPLETIPEDLIFESGEAFSLEGVDNIPMEELFCGSHGDGSLAGSSDITGISVDTVLDLNLAS
Ga0310142_06840	Ga0310142_06840_895_1233	F008069	KYTDATKAQWKTLTVPHQPTTTPRKPSTKRIATIKTPNTPYYVEEQLLDQDSFLFSTSIELSVNKIKPEKNYKTRYKSSFQSDRKGILYISLPPEEDLNKKVRFSRIEIKFY
Ga0310142_07714	Ga0310142_07714_572_1090	F053089	LSHVIPAPVDISNDLQNKHMTEDFYVDSPVDLIYKDPSSVFWIPSFVDFAKNQSTGNVGSWNKLLFMFTEFCLNNTTYFTRFSDCIIGINENTCLTSLFDFKYFHISQIETLLQKITKFLGRKNSIFQSCHFITHNPAFDITSIHPNVFTFIDDIINNNNDMMPDFQTGLYI
Ga0310142_08344	Ga0310142_08344_167_667	F029991	LLSGDLDMTKDLYKMHEKTLFPGDETSHSFANNKYRRHMLSFPMYPFRTLCPRDAYNMNILKGGNSEFDQTSPLLPANTQLNIKFTRRPAAHLLNYMLPTNLNLNLGASHNALTQTERNNALNFTVTTPVDTQYTITGIAINIQNMYLQVSKIFYIKIKIFEIKNI
Ga0310142_10024	Ga0310142_10024_49_303	F053090	VGLKLKYQFDEELIDTYISSKHKNNKADEQPAKTLKLNNRKKISILEYSCVQLPLVPFIDYLEKYSKTFVDQCLTYNNSNETSD
Ga0310142_10707	Ga0310142_10707_128_835	F045531	MQLPSPRENNRETCPAAPTGMTLRRDVPEVQQADEYVSRVSTWLKQAIDARRAEAIKSYRRALHSGILRLEDAATRAAQARRWDLSLVDVLMQDVDGSTADLLREAGRMLQELAGEDRRNWETRARNQAMRVMHVASEAYESLSSRQWTLQDCREYEAELESELQIYRKIAGEVKLSELSSKMRQDAKLRQQGIDTEVNRARRQVARIILAHECNLTQPNRRAAGRSPQSETRPIR
Ga0310142_11090	Ga0310142_11090_62_811	F036106	MEKVHAIERELYGEIVQIKKERLVQVTRCTATETVMTQHCGWQSHSGPGRYAKFHDPITIEPAECRQAVKTGHLKLRGKDHPFEMNVRKGVSVELVGGLDEYGNCRVGVFHLDGMRLEGQMVTANYEIYVRQEWARANDLTGSIKLSEYLIGTTADRALVDSGEGTYVWEHSKDACPDTLVSLYRGRIKVLTNSTSSFTDGTAIVSGRDKTQVAGLELKETMILCGRAAQTTHIKSIAVFFHPLEQIEVA
Ga0310142_12637	Ga0310142_12637_209_730	F046199	MKEIWLEWLLRPFLYYNREKFFQTYEISKEFDFNYITPYNFKRPIFFRRSAPPPSNKTAYLSIFCPVSYKEIQLSYKNKYEQTTTVKYGWTMFSICSDDFMDLSQWSICTTQKPNEITLVSCNKPNFTMYILNDNRVPMSLLNLGLSSLYQNKLNSALNLTKYVVPKTLSQQAP
Ga0310142_12703	Ga0310142_12703_2_241	F014708	MPEDAGVANFRVFFDELAAVVFQAPANLPVLYPVGSLEEVPYIGGVSPEAVREGLRLGVPDGIAPKFYCQFFDDSFFHEN
Ga0310142_12762	Ga0310142_12762_2_715	F001989	LPGGEPPEDVDEQFPGLRYLSEPNCLIQKAGPVHLLIGMDHAHLMPEHVAESADLSSQLRLMSSMFGGQHILVGEGAPRLSWVDAMDADERYEAAANRRRKREDCRKMAQEARQTALKHTHKLPRRLWNEDKEKSHSTVRGRPQNGGECGSSCKERRSLWKEELTSLSTLVGTVATLLAVITPSEGVEIGGSPGERPLLKTEPGMENILIMDYWMVLPIIVMVVTSLIMRVQKHLGET
Ga0310142_14138	Ga0310142_14138_444_668	F012550	MHYACVRLELLLGYACIMLALRLRYACVTLVLRLCYACVTLVLRLRYAWITLGLHSGCVTLVLRLCYACVTLGLH
Ga0310142_14545	Ga0310142_14545_8_655	F030997	MGVTTVEDYRLGPLVTRFREGAVVRPLELFSKIKRSVASIFKTTGDVAGALRHAQAYSITFTNVTTSAHMPDTHNTPYDDAYREAGECIINPTPGFESRPPAQPVDVTSSSVLNHAEDDDLLDRRGGRHCESSEEDSGFSDCSGDSASDGRVSPETSGELPTRGPSVERPAGKKRPKRRTKPRVSPADTGGRDAGLVSADTPTDLAAQVGLSAKSA
Ga0310142_15428	Ga0310142_15428_413_625	F014015	MVIFDDGTATILGGQLEEPQDIVIYCDLCNEPVAITPTANDQVFVTCLRCHAVSQINIKTNTQPDEPTEP
Ga0310142_15480	Ga0310142_15480_402_623	F079377	MQWSFFQTAGPTDFQNVLGISFLPANFTIDEDNFSSITENSLVVLDDFSFKLANNKQAKINFLKVVNYILVIH
Ga0310142_16242	Ga0310142_16242_2_346	F054598	MLHYMRPQFRFLIYLGQNNSRFNMADELDRFFYDMEKVASGDASVWGAPVVIDGVHILPEVECVVPTWLRQEFFARTSDLALPAGQHYVYPGVRSPLLLPTDYIRKYFSIYVYI
Ga0310142_16309	Ga0310142_16309_280_585	F027111	VSYAVGVSLILTVAGISSGRRFFHLFNRRRRHAARHTGQILGNGNDVRVNHRPPPRDQEELLELGDLMMGGMESVNRLLTGNPNLEVFGQEAERCSSSSGF
Ga0310142_18574	Ga0310142_18574_3_227	F076911	MKVVSDVLLLLCLHDFGLRVTVEVGQASACLYSEARLYKGPSQSTLPQLAATRSTGNISVRTQKVNHSNTRGLVS
Ga0310142_18609	Ga0310142_18609_276_440	F006051	MGRFVDAIRCHILEKYMSSYMRERNVDALLVLRNENKWAMTGKYITFLFHNFMF
Ga0310142_18968	Ga0310142_18968_2_424	F023783	SSLCRLSSIGQHALRMCYACVRLELLLCYACVTLALRLRYACVTLGLHSGYAWVTLHLRYACVTLVLRLCYACVTLVLRLRYACVTLVLRLCYTWVTLGLRLGYARVTLALRLLYACEFNINLRLSRQLSVCHHSVVCLQ
Ga0310142_19464	Ga0310142_19464_162_524	F025445	LLLQLDTLLLRRRLSVDDTADRDLDGGPLLLLLAFLPGDGDSLLFSLTLRTGDGDSLLFSLTLRTGDGDSCRRLSGDFATGVAARGRLDEDVEDPADSPFPGANFLLAPFILIPTASGSA
Ga0310142_19547	Ga0310142_19547_172_522	F066479	VQHIQENRLFFTPGYYYRPNQLKSMTCLLGNTDARTVYRNFDLANLNVNLGDRTHMLYNRYLCYNRFLPPDEKRYFAHLATNTLAVAPGSATDQKGAFNIFPMSLTTEEMNKSTSSA
Ga0310142_19919	Ga0310142_19919_1_279	F004315	LLLCLHKFDLRVTAEAGQALACLYSGARLYKGPGQANLSQSAATRSTGNISVWIQKVDHSNTRGIVSSLFFSRSEITAALSLHYQHLMKTKG
Ga0310142_19949	Ga0310142_19949_275_514	F079597	SEVGYLKVVTSEKIGGSGVTSTLGTWYGGVVMGVLLSFNEAAILYRDFNSAPSQKQNIIVFAANNSRGCEFHVAPTIIL
Ga0310142_20398	Ga0310142_20398_25_504	F021715	MLEIHKEAQTCIEALMSPSQIGAEKCIQAMKVEKVDQQSYIYKTENTVIRIFSPFPDTVSTLCGHTLNQNAGTLKEGYTDLSFKSDCVLYTSQMVIYSPYKLPIEETIKPLLSTPDLSMEIESLLSDIHEVHRINLTTLGQEFQTLNIDIQNELMDLSNV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300034522: Fracking water microbial communities from deep shales in Oklahoma, United States - K-3-A

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences