Sample 3300034449

Basic Information
IMG/M Taxon OID	3300034449 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0135641 \| Gp0397526 \| Ga0372963
Sample Name	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_2000_MSt2 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	45807318
Sequencing Scaffolds	71
Novel Protein Genes	89
Associated Families	67

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	52
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Candidatus Thermofonsia → Candidatus Thermofonsia Clade 3 → Candidatus Roseilinea → unclassified Candidatus Roseilinea → Candidatus Roseilinea sp. NK_OTU-006	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1

Ecosystem Assignment (GOLD)
Name	Phototrophic Mat Microbial And Viral Communities From Various Hot Springs In Yellowstone National Park, Wyoming, United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat → Phototrophic Mat Microbial And Viral Communities From Various Hot Springs In Yellowstone National Park, Wyoming, United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → microbial mat material
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Wyoming
Coordinates	Lat. (^o)	44.5387	Long. (^o)	-110.798	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000353	Metagenome / Metatranscriptome	1246	Y
F000642	Metagenome / Metatranscriptome	965	Y
F000855	Metagenome / Metatranscriptome	859	Y
F001381	Metagenome / Metatranscriptome	709	Y
F002229	Metagenome / Metatranscriptome	580	Y
F002372	Metagenome / Metatranscriptome	566	Y
F002970	Metagenome / Metatranscriptome	517	N
F002978	Metagenome / Metatranscriptome	516	Y
F003460	Metagenome / Metatranscriptome	485	Y
F004024	Metagenome / Metatranscriptome	456	N
F004307	Metagenome / Metatranscriptome	444	Y
F006183	Metagenome / Metatranscriptome	379	Y
F006938	Metatranscriptome	361	N
F007172	Metagenome / Metatranscriptome	356	Y
F007225	Metagenome / Metatranscriptome	355	Y
F008135	Metagenome / Metatranscriptome	338	Y
F009196	Metagenome / Metatranscriptome	321	Y
F009403	Metagenome / Metatranscriptome	318	Y
F011940	Metagenome / Metatranscriptome	285	Y
F012676	Metagenome / Metatranscriptome	278	Y
F014385	Metagenome / Metatranscriptome	263	Y
F015735	Metagenome / Metatranscriptome	252	Y
F015874	Metatranscriptome	251	N
F016100	Metagenome / Metatranscriptome	249	Y
F016403	Metagenome / Metatranscriptome	247	Y
F021779	Metagenome / Metatranscriptome	217	N
F022155	Metagenome / Metatranscriptome	215	Y
F024799	Metagenome / Metatranscriptome	204	Y
F028182	Metagenome / Metatranscriptome	192	N
F031513	Metagenome / Metatranscriptome	182	N
F032666	Metagenome / Metatranscriptome	179	Y
F036130	Metagenome / Metatranscriptome	170	Y
F036249	Metagenome / Metatranscriptome	170	N
F037242	Metagenome / Metatranscriptome	168	Y
F038253	Metagenome / Metatranscriptome	166	N
F038584	Metagenome / Metatranscriptome	165	Y
F040122	Metagenome / Metatranscriptome	162	N
F042758	Metagenome / Metatranscriptome	157	N
F043423	Metagenome / Metatranscriptome	156	N
F044249	Metagenome / Metatranscriptome	154	N
F045123	Metagenome / Metatranscriptome	153	N
F050403	Metagenome / Metatranscriptome	145	N
F053114	Metagenome / Metatranscriptome	141	N
F056637	Metagenome / Metatranscriptome	137	N
F056643	Metagenome / Metatranscriptome	137	N
F057399	Metagenome / Metatranscriptome	136	N
F060638	Metagenome / Metatranscriptome	132	Y
F063726	Metagenome / Metatranscriptome	129	N
F064295	Metagenome / Metatranscriptome	128	N
F069691	Metagenome / Metatranscriptome	123	N
F069791	Metagenome / Metatranscriptome	123	Y
F073601	Metagenome / Metatranscriptome	120	Y
F074920	Metagenome / Metatranscriptome	119	N
F074921	Metagenome / Metatranscriptome	119	N
F076977	Metagenome / Metatranscriptome	117	N
F077344	Metagenome / Metatranscriptome	117	N
F077345	Metagenome / Metatranscriptome	117	N
F079732	Metagenome / Metatranscriptome	115	N
F080999	Metagenome / Metatranscriptome	114	Y
F081381	Metagenome / Metatranscriptome	114	N
F084273	Metagenome / Metatranscriptome	112	N
F087248	Metagenome / Metatranscriptome	110	Y
F092120	Metagenome / Metatranscriptome	107	N
F093431	Metagenome / Metatranscriptome	106	N
F093914	Metagenome / Metatranscriptome	106	Y
F104113	Metagenome / Metatranscriptome	101	N
F104639	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0372963_00135	Not Available	5095	Open in IMG/M
Ga0372963_01329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	2432	Open in IMG/M
Ga0372963_02941	Not Available	1763	Open in IMG/M
Ga0372963_03587	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1610	Open in IMG/M
Ga0372963_03961	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
Ga0372963_04136	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
Ga0372963_04829	Not Available	1397	Open in IMG/M
Ga0372963_05948	Not Available	1250	Open in IMG/M
Ga0372963_06480	Not Available	1199	Open in IMG/M
Ga0372963_07534	Not Available	1102	Open in IMG/M
Ga0372963_07551	Not Available	1101	Open in IMG/M
Ga0372963_07555	Not Available	1100	Open in IMG/M
Ga0372963_08904	Not Available	1005	Open in IMG/M
Ga0372963_09608	Not Available	962	Open in IMG/M
Ga0372963_09938	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
Ga0372963_10000	Not Available	942	Open in IMG/M
Ga0372963_10055	Not Available	939	Open in IMG/M
Ga0372963_10482	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
Ga0372963_11133	Not Available	884	Open in IMG/M
Ga0372963_11178	Not Available	881	Open in IMG/M
Ga0372963_11528	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
Ga0372963_12318	Not Available	830	Open in IMG/M
Ga0372963_12532	Not Available	821	Open in IMG/M
Ga0372963_12694	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	815	Open in IMG/M
Ga0372963_13080	Not Available	799	Open in IMG/M
Ga0372963_13806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Candidatus Thermofonsia → Candidatus Thermofonsia Clade 3 → Candidatus Roseilinea → unclassified Candidatus Roseilinea → Candidatus Roseilinea sp. NK_OTU-006	772	Open in IMG/M
Ga0372963_14363	Not Available	753	Open in IMG/M
Ga0372963_14886	Not Available	736	Open in IMG/M
Ga0372963_15328	Not Available	724	Open in IMG/M
Ga0372963_15422	Not Available	721	Open in IMG/M
Ga0372963_15668	Not Available	714	Open in IMG/M
Ga0372963_15915	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	707	Open in IMG/M
Ga0372963_16177	Not Available	700	Open in IMG/M
Ga0372963_16368	Not Available	695	Open in IMG/M
Ga0372963_16395	Not Available	694	Open in IMG/M
Ga0372963_16794	Not Available	684	Open in IMG/M
Ga0372963_17010	Not Available	679	Open in IMG/M
Ga0372963_17160	Not Available	674	Open in IMG/M
Ga0372963_17241	Not Available	672	Open in IMG/M
Ga0372963_17735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
Ga0372963_18505	Not Available	644	Open in IMG/M
Ga0372963_18843	Not Available	637	Open in IMG/M
Ga0372963_18989	Not Available	634	Open in IMG/M
Ga0372963_19305	Not Available	628	Open in IMG/M
Ga0372963_19407	Not Available	626	Open in IMG/M
Ga0372963_19564	Not Available	623	Open in IMG/M
Ga0372963_19701	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
Ga0372963_20151	Not Available	613	Open in IMG/M
Ga0372963_21013	Not Available	596	Open in IMG/M
Ga0372963_21298	Not Available	591	Open in IMG/M
Ga0372963_21410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
Ga0372963_21413	Not Available	590	Open in IMG/M
Ga0372963_21552	Not Available	587	Open in IMG/M
Ga0372963_22026	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	580	Open in IMG/M
Ga0372963_22392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
Ga0372963_23437	Not Available	558	Open in IMG/M
Ga0372963_23478	Not Available	557	Open in IMG/M
Ga0372963_23524	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
Ga0372963_24096	Not Available	548	Open in IMG/M
Ga0372963_24348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	545	Open in IMG/M
Ga0372963_25039	Not Available	535	Open in IMG/M
Ga0372963_25208	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	533	Open in IMG/M
Ga0372963_25237	Not Available	532	Open in IMG/M
Ga0372963_25464	Not Available	529	Open in IMG/M
Ga0372963_25812	Not Available	525	Open in IMG/M
Ga0372963_25833	Not Available	524	Open in IMG/M
Ga0372963_26368	Not Available	517	Open in IMG/M
Ga0372963_26587	Not Available	515	Open in IMG/M
Ga0372963_27045	Not Available	509	Open in IMG/M
Ga0372963_27082	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	509	Open in IMG/M
Ga0372963_27724	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0372963_00135	Ga0372963_00135_445_639	F073601	MLQAKATCLVMVLPAKRREGQRMFWLLHFAWRCAIKIMECGSIVCTLPVEKRALAGMGVLLQQG
Ga0372963_01329	Ga0372963_01329_2159_2431	F031513	TYPASLPALRAGRELVWIARCDAAALIEHQTLERARESAALASLWKGGGQWIDFLRVAGVVLPAAFAYFTWAQVASLQSLVAQILALVGK
Ga0372963_02941	Ga0372963_02941_300_1355	F038584	MTEEIKQIQKAGEELLATLHATAATEEETKTLDAISKAAAHIRQQLRERMPSAGTRIKVSDLRSARKLMQRYVQKTIVGVNTPREYIGEAFYVTRQLVIEFIQDYLRTETLDVLAEITQVRLNPFTGAPAIVGEGEPKPEMRTTPQRVTSNYQKIAFGDVITDEVLLAYPDIVDFLIWHGAYRLEVFLHNALVTLLSGSASAATLPTGIISPQVADLLIYMRAFHDQQSAISRRGEWLANAAIVPFPYYWALVFGALKSTTGEYLQLDRQLQGLSLIPAGAAQTAPTIVFNENELEVFFLGDITVNFGRVLDAASDTNVRRLSMDLFYAPLPHTGRPVIVANTQNAINSMV
Ga0372963_03587	Ga0372963_03587_26_355	F003460	MHDLVQAYEVLHSVIVPRGLYAEVGMALQVNLRRPSELRDVVVELVIRGRAIGTPVWRVAEGLRVPGRMRLRSVSSALYGLMMRAAYDIEAQIPLPGGDRPQRPGGARP
Ga0372963_03961	Ga0372963_03961_931_1536	F093431	FYQNARWQVTGSQVERLRSVGAGVYQWIVETQLVLRRGSLTQTFNEDIVWYITQDRETRQVSVIGYGDMPDSPRRDAELPYQPILPGVIHQNSNFSTTITFEDESQHTKSWQIGGWEDVSTYAGSVGCYRIREEGSWSRPLPFTEATVAATAWFSPQLMNYARIETRESGWIGANPVEYTLTYLLRRTNVPLRPPTGVQAQ
Ga0372963_04136	Ga0372963_04136_607_1392	F084273	LKSVIRAVALAAVLLLAAGVADAAAVDKNILACGQNVGRLILANPAVYDDGTLGGVTVQGSFSGNYPPLRNGIEIRWVQLISTTHPLNTNAAPNTPYFDPGELDMTGDYDPFYWNTTLQGKDNNNYPQFWYKNYQFNGGQGITFYDQPKRLKSSAPVSWLAELNLVCWETGTKNFSVLWTGTYGFNIAQNGNVTVNGWNELANPAWLTQARLTQYFPDWTMSDACRNCLVPEPVFLQMGALLGMSGLGVVASRRRAGRRSS
Ga0372963_04829	Ga0372963_04829_2_433	F040122	TEQLLEFLEQHINAEQLLEFLEQHIDELPHLMGAEEWRAFQADLHTSVQQMHEGISPNELEQAVQPLFKHLNRCPQVREKLRAFSESLRPRLSQPPAQTLTNEQQLNQVMNRFRVLANTRGAASTDEKSEAPKRADESERRQR
Ga0372963_05592	Ga0372963_05592_568_1290	F045123	MARRAKPSGKPTTRVRETLTRLGYAEHEDFEYEVEVRLYGNRRLYADVMLFQGDTPLVVVEVEGNARQQREGYEEARLKGAAWNLENPVPLLWVAAGNQDALYQLQPSQSSIQYAPLDGETPAELLAPARLLEAIGDYLRRTETEAGQELRYRDALQRALAESRGNSAHEKFRNWIDALAGASARRRLPTPLQEAQQMVCQARQSGQPNFALALALRHTARGYFRPLSKNDAVRRTGRYY
Ga0372963_05948	Ga0372963_05948_75_413	F056643	LPVRIIPTLGGLRLVEGGVYTPTRATRAVWEIDDLLLVRDVGMGRGVADTAAALVDYIEDYVAQLRFAWLARGDVQLLNVSGIVDIVRYGERAYEGVVMTTRFAHLIRAPSA
Ga0372963_06480	Ga0372963_06480_2_697	F079732	MIETYITDFGTEVKNLGIKILDGYADKLGNPLQGGGANQDAEYAYRVAENPCPSGNLFRPRALIATFEDGTKVRFPIGSRSNLAKRAKQLLNNGAICIDYEGEYWPYVPSTLILNTRYSTQPLGGFTNDGSKTVGVFDYQSDILGTVVQPFAIESVPPILVATAIACLSNVVYGSGFCAGVRSLNIKARRFRGKGLVQGLPLGSGRKTYSRDIKMSSLNPTNCGAANAPNYQ
Ga0372963_07534	Ga0372963_07534_759_974	F104639	VVEIASEGSNIHIRRVADRLLIENYIGAVEIYNLLGQRLLSYSYNPGLIDLAGLPTPLVVRLDDGSWKVIP
Ga0372963_07551	Ga0372963_07551_317_769	F000642	MQEIGIALALCAVAAAVWYMRRREAGAGRVTGWLLLYDDLGGWRVLPASYGDAGVVADGVTYPASLPALRVGRELVWIARCDAAALIEHRALERARESAALASLWRGGGQWIDFLRVAGVVLPAAFAYFTWAQVSALQSLVAQILALVGK
Ga0372963_07555	Ga0372963_07555_39_389	F009403	VFRITRRGRGSGRAPALSVVRSADGARLEVREGRYGRGALYAYCDVDDTLAAHTLLLTFADMRARDIYIHTDIPVISERKFFDAFGSGSVLPDADSLPDADSLPDALPDVDDSSSL
Ga0372963_08904	Ga0372963_08904_467_733	F011940	LVGDLLDGLEALGRAVAPPTGRICDLPVPVLADAPEYGFKDALPDFVAGLCGFFGVASPVLGFVRFPVTLMVVGFVFWTAWRVFRSLS
Ga0372963_09608	Ga0372963_09608_218_937	F015874	MTEELGHRLKEEPVGTTIRGRIKVTIQSEKIEAFWKAVTRQWNRLAAAKSPGCEDLLLTEREWLVLWRGLLAARCNYIDPEANYPVYRSLRPRRAEIPSLMWEALYCYGHVATEFGADYIVCATADWPSAEEFAQAYGKWLNALPIYLLVMECARSLPESERACPAFVLNVTERNGSLVVQSNYPLRDVRPRDTLWSVIALPPTPDLAVPKTVYLEWDPNSIIGEILSSMRKREGLNGA
Ga0372963_09938	Ga0372963_09938_358_945	F045123	VRETLTQLGYAEHEDFEYEVEVRLYGNRRLYADVMLFQGDTPLVVVEVEGHARQQRAGYEEARLKGAAWNLENPVPLLWVAAGNHDALYQLQPSQSSIRYAPLEGVSPAELLAPARLLEAIGDYLRRTETEAGQELRYREIFQRALAESRGNSAHDKFRNWLDALTDTRARKRLPPAIQEAQQIVRHARQSGQANF
Ga0372963_10000	Ga0372963_10000_509_799	F012676	MAMELPAMVKSSVGKEGAMTSIKLAARWDGSPMSLTHPEHGWIRFLEAREIAYAAYLDEPAGWRLVVCDERRFTRALHALRKYGVYGICEWTYDIH
Ga0372963_10000	Ga0372963_10000_760_942	F007172	FAAALRAAKRNTYCQAVGGFVIVRMSDGSIDWFPLGQPPHRGAVILGKWRWNYRRWSRVA
Ga0372963_10055	Ga0372963_10055_2_385	F077344	MMSLLPALATMLRLTARFSPSLATYLFNSFCTALSKRLGFTSSALFERTTGLTLPSANQETLQSAFALWAHRTLGDKPQETVDEIFGQGGERAEAALHSALRQLPKHEICCLSTCATQAMKQALIANI
Ga0372963_10482	Ga0372963_10482_568_915	F016403	MREFSSFNRAWTQILRNLGIDYTLCIATSSTTGANIQTPQGVFAAGSADLRGYFRQFDAVILCDHSLNLNDTARINYSVFWLSWNAPEDPAFLFFNPHFSTAITESAYNSNFPSDF
Ga0372963_11133	Ga0372963_11133_391_777	F042758	MKPTDFLNIAGRLPAQAITGATNTTSIDMQLLRGVAAVCVVGAATTPPSFTIQSSADNTTFTNLAGKSITSIPANSEAVINIRDEELPDGHRWIRAVVNGNATVAVVFIGTSARDNPPSKLTTTTIVS
Ga0372963_11178	Ga0372963_11178_118_573	F000642	MQEMSVVLALCAVAAAVWYMRRRDAGAGRVRGWLLLYDDVGGWRVLPAAYGDSGIVADGVTYPASLPALRAGRELIWIARCDAAALIEHQALERARESAALASLWRGGGQWIDFLRVAGVVLPAAFAYFTWAQVSALQALVAQILVLVGDK
Ga0372963_11528	Ga0372963_11528_3_278	F028182	RRLDTTEEVIREWIRLGLLDVEPPPAKPRRTRELNLAFQPTSATPEPKVDLEQLYEVAEEVGWLLLSLEAWDRADTETACQLSHTGTIPPP
Ga0372963_12318	Ga0372963_12318_419_775	F074920	MANLDPVLIGATPVTLPAGLTYAASQSHTISLPNGIKKGHRLLLQITATAAGDITFIEGVNPPSFRPLGNFVLTTAANTTYFVVLESARFINASGQIAFSTGTGAAGTIRAYVLEEVS
Ga0372963_12532	Ga0372963_12532_438_821	F069791	MPSSELAHFLNVALDVQAEPYAGVHVADGVAAATDGVMLVAKKYNDPVYLRGRGSLSPKAAKVLAALAEATWIGSIEVNGNRVTATAQTTRYDEQLGAEVAGGYREIELEFYCPRVPIVRMLAVLTDE
Ga0372963_12694	Ga0372963_12694_35_814	F036249	MTFNPNTSHYASAVGAWLDSNFRDQFTVTTAFLEKLKQRGAFKRGAAYLVQPLFSSGNNTVAGVSNFNSPMSIPADTGLSAVYTWSWYQGLTTVNAQEAAAINTEYEMVDLLEERLRSTVAQFGQVLSNHLFTDTDATLGKIAGLPYAVDSPTTTANSFGGISRSNSQNPWWRAVVINASNQPLTLQRLGNAYNLASENGGDSPDIIVMPTQLFTAFEALLLATQQYRQDDEIARAGFMGYLYKGATVLFDPRVPNNTIF
Ga0372963_13080	Ga0372963_13080_1_339	F015735	MVVYHHWSVEWHPRSDPPYGLPRVVCIARRAVSDPWCGPGPFPADVDRAARFWNLVASGGARDHGAGYEVVWRLSVVVDGADGDAPPDGAWSDDPVYRARRRLLRWIMRSQCP
Ga0372963_13080	Ga0372963_13080_654_797	F076977	SVDGYDVFVGSPDYARGEVVEFPARLQFLRDGSGRPVIKLYVDEGVR
Ga0372963_13806	Ga0372963_13806_4_759	F021779	VVCANTSETQQASITITFTNRAGTVESTYSDTIAPLSSKGYNTRFGGNLPVAQRDLIRGLDQTSPPGTSSTPNFLGSAQVTSSQPLVCIAKQLYDKDAAAIPPGSPASEDPKTRQSLGYNGINLSDAKTEIFLPIAWRINAQPTCGFWRYTGLIVQNAGTSDATVTVTAYTTAGAIVNTYNDPVPLPPLTPRGYNTRFEAYSTAVGGVLGFNFDGVLRLTSTQPLVAVAENWQNCNSGFSPMTDSNITELN
Ga0372963_14363	Ga0372963_14363_369_752	F002970	MSSSAVTDSIELLAGLAVQYNSAVVPVRRLTTQPNWSDAAQLPVRIIPTLGGLRLVEGGVYTPTRATRAVWEIDDLLLVRDVGMGRGVADTAAALADYIEDYVARLRFAWYVRGDVQLLNVSGIVDVV
Ga0372963_14886	Ga0372963_14886_248_532	F011940	VSWEGSIVGDLMDGLEALGRAVAPPAGRICDLPAPVLADAPEYGFRDAFPDFILGLCGFLGVASPVLNFVRLPVTLMVIGFVFWSAWRVFRSLS
Ga0372963_14886	Ga0372963_14886_2_235	F060638	MDWLEDFWSKIVSWFDELSTGVHNGVIGWVNSLVEIWNGWMDALLHPAQAMPSIPALRFIVGWLGGIVDYTRLMYMLV
Ga0372963_15277	Ga0372963_15277_2_178	F087248	GAGWQELATGTLPGDANSWGRIEIPILGDGYYDQYRVEVYRTDGSNYTLTSKLIGVRG
Ga0372963_15328	Ga0372963_15328_165_722	F077345	MRRIALTVDALKEALHEILGDALEASSEIGEREGKLVLHWHLIRESDTGWLEVDPEVERRMLMFRYFFPLQLSAEQPQGTIEMFWLHWGINELNFRMEEGHFYYDTHHEPPSVVLVMPVVCYEDTVPEPVIRHYLERIQELGQRFMPMLSELARSICRADEFEQHVVEAYELFKEVIDERTRQLLR
Ga0372963_15422	Ga0372963_15422_2_709	F063726	LNLDRSFPYSNANAILDADILLRLPTLYRRDYKPLPSGTRLPIHTAPDAQDLAKASWKAWRFGQFVADGIEVPTIEPWLRTRQLRTVTYRPLPKLHSSDPIPHRVDSLRYGTMRIPVLNYSPDMIAGYPCPPGGEPREAAGELPRVWLEVGDPRATGAALVPDDPCVTQRAIDLAVYALSHASPDQSMSEFMNGLRTIRDRSVSGIYGYSDTDAIYRMYYLDKDQIAWFGKDAPLH
Ga0372963_15668	Ga0372963_15668_306_566	F081381	MNFWNEREELRHLRERYELDKAQWRSEYWSLHAEWEAAVYHNRRLREVLSEIVEAYRTADPNQLREAVERAVGLLGLTEQEEEEVE
Ga0372963_15915	Ga0372963_15915_46_459	F057399	MSRTFERIATLEGHSYAYVDRDLAPNSYLYRVVQELPSGGRSESEAVEVVVHPAAETQVYVHGGSAPIGEAILVSWIRSAPEPLTFTLYDAAGRQVYTQQVFAAEGSQLIPSPNAAGVYLLEVAGRDVHRTYRVLWH
Ga0372963_16177	Ga0372963_16177_459_698	F074921	RELVWIARCDAAALIEHRALERARESAALASLWRGGGQWIDFLRVAGVVLPAAFAYFTWAQVSALQALVAQILTLVGER
Ga0372963_16368	Ga0372963_16368_401_658	F069691	MTGNPPSNLNVEQILAWALLALHTNGSSQTVQEGGETLPRFSYALAPNAIILRANLPLQQGWPGATSPLWTRVGESVQGGLPQGF
Ga0372963_16395	Ga0372963_16395_80_409	F003460	MHDLVQAYEVLHSVLVPRGLYAETNLMLMVNLRRPSELRDVVVELVVRGRAIGSPVWRVAEGLRVPGRMKLRSVSSILYGLMLRAAYDIEAQISLPGEDRPQRPGGARP
Ga0372963_16794	Ga0372963_16794_41_439	F000642	MRRRDAGAGRVRGWLLLYDDVGGWRVLPAAYGDSGIVADGVTYPASLPALRAGRELIWIARCDAAALIEHCALERARESAALASLWRGGGQWLDLLRVMGVVLPAVFAYFTWAQVSALQSLVAQILALVGER
Ga0372963_16794	Ga0372963_16794_436_684	F002978	MSVSVRDWRVTLKPWADRRLWFVQARCGGRVVWGVVYDADDPDSVSLARRAIATLRAAGADCSALPASLPGTPPGAPGAPGA
Ga0372963_16942	Ga0372963_16942_3_647	F006938	MLHIRVTGAKSGGLSEAELVSDIPLKPLLATVKTGHVVDRRAAELVTKLFGKEVRDYARSFTRSGATLELLYESLRKYDHNDVAWSALSDGVKERLRKAMNLAYQVFGVRGLTPKPLSEVSVEPSSPGASWRLYGRQGKRTDFSVYTEGLARAQLLMDKSRYYQQRYCQLPPCVAYLRTQLAPRNAPKVRLVWGFPFELNLVEAAFAEPYQEALL
Ga0372963_17010	Ga0372963_17010_336_674	F011940	VPRYTLVPITPPPDGNDMSWDGSLVGDLFDGLEALRRAVAPPAARICDLPAPVLADAPELHGMRDAFPDFVLGLCNFFSIASPVLGFVRFPVTLMVIGFAFWTAWRVFRSLS
Ga0372963_17160	Ga0372963_17160_193_588	F044249	MTKRDAILALLGGALTIVAKKYVSVLAALIVLGSLANFLGWVYAIVSGEGIKAVKVLQGTARLVFYIVFYLALLVALEQVATYLIPPLLSVAIIYEAGLALKKAVQLNIIPAGLVRQLTKVFRHEPPEKAS
Ga0372963_17241	Ga0372963_17241_3_281	F004024	MPSERDYLRQPSSLTDDDMMFLDARATLAAALARAVVGYSDSRVRALAWLAVATPRLYDRVAPIVESAAIRQSPGASRTLRDALRALSLEEYV
Ga0372963_17527	Ga0372963_17527_1_663	F007225	ATADGGSTGLGGGIIGGFVNGQEFDLRIRMDVPPGVPRFPRNGGGSFGFIFNPRYIDIKLFQTSTGDPITIAQAVANAAVGEIVSLRGYGFPGTTERGRDLVGAIAVGARRNADGTIGVRMSILSTDPAVSNATHADPFLRTGPEDDDGNRRLPIVIVNWLNIRDDFGVGGIYTVQNDGSFVLVYDDNGNYRTRQVPINGFSFTCVPEPASMIALGSGLVG
Ga0372963_17735	Ga0372963_17735_27_632	F000353	MLGMTTQAQVSGTELKVRIEKALNEKGLKKLITNLEKELNGEHSFLPHEVETQIRREIASAGVAVSQHGGWYRCIAAYLILPRLEELLQVKSTGGEQNIAPIVQKLRNEALRESLSTFGLEVPARYARTSSATGRTHVRLSREQKQQLVENFLDALPTFEALQDVLGTLPKSTNLMVKQIRTLVKRYLSIANRFQSVATHE
Ga0372963_18505	Ga0372963_18505_223_552	F009403	VFRITRRGRGSGRAPALSVVCSADGARLEVREGRYGQGALYAYCDVDDTLAAHTLLLTFADMRARVIYIHDSLPLISERKFLDAFSGLGPVLPDADSLPDAGPESVRLP
Ga0372963_18843	Ga0372963_18843_118_306	F043423	MRMDAFSALFAVSALLLASVTAKQAAEIRALRNEIQQLKRELERHQRAFELLEQAMESFKAK
Ga0372963_18989	Ga0372963_18989_265_495	F008135	MNDPRTERVLTEAGAGIARVLDARRRHAVALAIEACWYIVAALPPDGSVTFGDVVWLLRWFARGFNEDVEVDDGDE
Ga0372963_18989	Ga0372963_18989_482_634	F080999	MATNNRLVLRGMVAAYREFVSRKDGKLFRIITVFGDLVVGEAVLCAVDGYD
Ga0372963_19305	Ga0372963_19305_52_306	F004024	MMFLDARATLAAALSRAVVGYSDGRVRALAWLSIATPRLYGRIAPIIEASAIRQSPGASRTLRDALRALSLEEFVRRRDDRRER
Ga0372963_19407	Ga0372963_19407_2_625	F050403	IAWFGKDAPLHGGLMHFMPNPQNKKLYWLLVHPPGDPRLHPVSHPFDAYVRAAESGTATSGSPYWRVQHLTTKGKRLVGPWIGRIGVRFVLYSPDEALVCGRSVPHSEIAFGKQIEGNRYERAARKEIDEFFAVRCEFAVGPHTRLGTSHLTSAVVYLVWDFEHNAWTFDEIAVGSAEWGMTAGIDRAFYPASSVEEANSRLMPASLV
Ga0372963_19564	Ga0372963_19564_150_620	F004307	MFKELISNGKDGHERPELNGAYIGRFLGVKERQRPTFETRHNPEPTLEDVFVFEFEVEDDDGKPLRVSKWVRKPPHLDHPAKNGKVSNLYKTLAALYGVSVMSDEQLQNAEEFVQSAVGREYQLTIETKPSGWYEIVHIAPVRARLRKTKEDEVPF
Ga0372963_19701	Ga0372963_19701_58_621	F032666	VLPADQVGIYTLFLSVHPDQEWLLGGPNSSPRWSTLGFSFTYDTNYIDLVYRDPNNGSDVFVSNLQVNATFSPYISSNVPATGVAAGQVLAKNGPLVTVAFALAATSNGNGVAGPSGFRGYLRDWYKNNYDDELLRVKVNGPAIATLPNQTYSTSPGDPQGNIIIQVNPPDSSRDVIVDGRFIVPEPA
Ga0372963_20151	Ga0372963_20151_280_609	F003460	MHDLQQAYEILHSVLAPRGLYAETNLMLLVNLRRPAELRDVSIELVIRGRAIGSPVWRVAETLKVPGRMKLRSVSSVLFGLMMRAAYDIEAAISLPGDDQPQRPGRARP
Ga0372963_21013	Ga0372963_21013_411_596	F037242	MQEMSVALALCAVGTAVWYMRRRDAGAGRVRGWLLLYDDVGGWRVLAASYGDSGIVADGVTY
Ga0372963_21298	Ga0372963_21298_24_218	F014385	VIHSESPDWWQLVQLALVRMALEQLSPEEERAVWLYAEGATLSPKQRTLAETALQKIRRMLRLE
Ga0372963_21410	Ga0372963_21410_2_568	F000353	ELKVRIEKALTEKSLKKLITNLEKELDGEHSFLPHDVETQIRREITSAGVAVSQHGGWYRCIAAYLLLPKLDDLLQVKSMGGEQNIAPIVQKLRNEALRESLSTFGLEVPARYARTSSGTGQTRVRIPREQKQQLVENFLDALPTFEALQDLLDTLPKNTSLTVKQIRSLVKRYLAIANRLQSVAAHE
Ga0372963_21413	Ga0372963_21413_217_576	F003460	MPKASRDERYMHDLVQAYEVLHSVLVPRGLYAEVGMTLLVNLRRPAELRDVVVELVIRGRAMGSPVWRVAEGLRVPGRMKLRSVASVLFGLFMRAAYDIEAAISLPGDDRPQRPGGARP
Ga0372963_21552	Ga0372963_21552_1_231	F008135	MNDPRTERLLVSAGASIARVLDARQRHVVALALEVCCYIVAALPPDDELTFGDMVRLLRWFGEGFNRDAEGDDGDG
Ga0372963_21552	Ga0372963_21552_250_585	F002229	MEVDMVTLLTLDGVEDVDYAPSDAEVRASLDDAGLYGMVLNGVTWMRLSSGAGWWTVIGGRRVTATLAAIGWCWVADGCGARGYWSPALACVPAEVRALCGGYVEDEDEED
Ga0372963_21853	Ga0372963_21853_2_580	F022155	CGIDREQLQELSLLPDLARTLESERNSYVLLAMAGYIPEAAEVRAHPEATRDIVARWEALSRGAFFGGDRQAAWVARWNLRRAGVLTAEEQARFDADYVEAIGAENDRDVLLALARITPPGTFPMATWAGRLSDQDDRCRLAAGLAIHDWLVEVMEGASGEWRVASGSSLPATRCPLLAARQYGQFPELPLRL
Ga0372963_22026	Ga0372963_22026_2_193	F024799	MPATVGVPEMVMLPPEKVPVTPVGKSENVAPVAPVVLYVIGVIAVFTQTVWLSVPGAEVSVMVL
Ga0372963_22026	Ga0372963_22026_467_580	F056637	QTVWLSVPGAEVSVMLGCTMMVPVAVTFPQPPVKVTV
Ga0372963_22392	Ga0372963_22392_74_574	F000353	EKELNGEHSFLPQDVETQIRREISSAGVAVSQHGGWYRCIAAYLLLPRLEELLAIKSTSEEKNIAPIVQKLRNEALRESLGTFGIDVPARYARTSSGTGQTRVRIPREQKQQLVENFLDALPTFEGLQDVLDTLPKNTNLMVKQIRTLVERYLSIANRLQAKVTQE
Ga0372963_23437	Ga0372963_23437_163_453	F012676	MAMELPAMVTNRVERNDMNSIKIAAGWDGSPMSLTHPEHGWIRFLEARGIAYAAYLSEPAGWRIVVEDEEKFMRLIPKLRKYNIHGIYTWTYDIHP
Ga0372963_23437	Ga0372963_23437_2_202	F007172	FAAALRAAKQSDYCRAVGGFVIVQMSDGTIDWFPAGQPPHQDGEEDRDAVILGKWRWNYRRWSRIA
Ga0372963_23478	Ga0372963_23478_74_310	F006183	MVIFPPEKVPVKPGGKPENVAPVAPVVLYVISVIGVFTQTVWLFVPGAEVSMMVLSGCTVMVPVALVTPPQPPVKVTV
Ga0372963_23524	Ga0372963_23524_290_556	F002372	SHLRALLDALDDVDMSIAYELHYYPYAIVELLRVRDDAPPIVLRSAYVSANRQWERHSEFTLRVVEAALQLVQEYRADPSLGGSDSWA
Ga0372963_24096	Ga0372963_24096_18_209	F092120	LPVPVLADAPEYGFKDALPDFVAGLCGFFGIASPVLGFVRLPVTLMVIGFVFWTGWRVFRSLS
Ga0372963_24096	Ga0372963_24096_219_548	F000855	MDWLEDFFSKVVSWLDERTANIYNAVVAFINVLVDVWNGWMDALLHPAQAMPSIPELRWVVDWLGDIADYTRLMYMLVDYVAYAAVVQQALAAQLTIVTIGLAFRAWLVI
Ga0372963_24348	Ga0372963_24348_1_282	F036130	MTDFPTFDSVDEFFRYLERLVMDIKEGRVENLPYNAVFLADRAEAEESLAYHRAEAVRLGFDPNRVVMLRDPASDAWVVLIPSDQDDAAFEELW
Ga0372963_25039	Ga0372963_25039_110_274	F001381	MHYVIATLYVFVWLALAAAAALWLPRWALPAALVQLAVAYVMLRAVWLTVARDD
Ga0372963_25039	Ga0372963_25039_277_510	F053114	MDSLLHPAQAMPSVPALRWIVDWLGGIVDYTRLMYMLVDYVAYASIVRRALLAQLAIVAVGLGFRAWLVIRRVVLVS
Ga0372963_25208	Ga0372963_25208_1_234	F006183	MVMLPPEKVPVTPAGKPENVAPVAPVVLYVIGVIGVFTQTAWLSVPGAEVRVMVLFGCTMMVPVAVTFPQPPVKVTV
Ga0372963_25237	Ga0372963_25237_165_518	F016100	MVKSVKVERFKEYSELVRVVSRSEKTPATNKDIIRPLNYELLVGTHVPEPDWHRLGALVVVLFRSFAAVDVELWLTDAGIWVADALVDFGGVRRLRKGEGDTPLQAVIELVYDIQRY
Ga0372963_25464	Ga0372963_25464_12_242	F008135	MNDPRTERLLVSAGTSIARVLDDRQRHAVALAIEACWYIAAALPPDGSVTFGDVVRLLRWFARGFNEDVEAGDGDG
Ga0372963_25812	Ga0372963_25812_2_289	F093914	EDTNSAANTIFDQFQSTSPRLGVRWSPRGLVGSARAYGTSNDGGTSFGLGVITNVTLSALDPSDAEPYVAMVTVRTPSLRRYTLGSSPTNLNPAP
Ga0372963_25812	Ga0372963_25812_302_523	F064295	MTTPAEIYDIDAISVDRSALTIREAASVLNNELTAPVVARLVRKAIGDQADRFPLRALKAVYERVLPQIFEPDE
Ga0372963_25833	Ga0372963_25833_3_482	F104113	MQRKTFTGTIASVSALGIRDEFTNELKRLNISILIPVSYVDGKPLREPVWTNIIIPPEKAAELGLEIKAKSLRTDFQHITEEELAQYGLHVTDSGTVGLTISYDAVGLNKASARQLMSEGLPPRTVYPASCVANIQLDTSDNLITEFDTVDDVKQTEGYR
Ga0372963_26080	Ga0372963_26080_3_521	F007225	GLGGGFEGGFANGQEFDLRIRMDVPAGVPQFPLNGGGSFGFIFDSRYIDIKVFSTSTGAPLTISQAVANAQVGEIVPIRGYAFPGTTIDGVNLVGTPAFGAQRLAGTLIGVRIAFLSADPAVFNENHADPFVRTGTASNRRLPVLIVNWLNIRDDFGVGGTYTVQNDRSFVYV
Ga0372963_26368	Ga0372963_26368_15_503	F038253	MTGVQEELLRIIQSDEARELIENMVNRMAVIEEAYYRIRELREAVQPYIPDNSEHDEEYWLAAYLVKPHASDVIEKFRQLREIQHKLAKIEGQVQEMDRKESYLEDKLGNVDSAQENTGDSIYKLIGEDADPYVSLGDSDLYDLLYESIREWAAKQLSTERS
Ga0372963_26587	Ga0372963_26587_190_432	F002978	MSVRDWRVTLKPWADRRLWFIQARCGGRVVWGVVYDAGDPDSVALARRAIATLRAAGADCSALPASLPGTPPGAPGTSGA
Ga0372963_27045	Ga0372963_27045_190_507	F009196	RQVLRRAGQEDTDAGTVTPFVNLPPEVLPDFRRLHEIETALAAGQMPPPPDAAAENRSAPRAVLARLPEAHPRTGRPGITGQTTSRTAGSDPKARHPFPEVIRHE
Ga0372963_27082	Ga0372963_27082_2_196	F024799	MKVPVSLGMPKMVMLPPEKAPVTPSGKPETVAPVAPVVLYLIGVIAVFTQTVWEGETTSQDRPHG
Ga0372963_27724	Ga0372963_27724_279_500	F064295	MDKPAEIYDIDTIRVDRNALTIREAASVLNNELTAPVVARLVRKAIGTQADRFPLRALKRVYERVLPQIFEPDE
Ga0372963_27724	Ga0372963_27724_2_265	F093914	TIVDRFQSATPTLGVRWSPRGLVGSARAYGTSNDGGTSFGVGVITNVTLSALDPSDADPYVAMVTVRTPSLRQYTLGSSPTNLNPAS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300034449: Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_2000_MSt2 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences