Sample 3300032161

3300032161: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300032161 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0134626 \| Gp0331158 \| Ga0315301
Sample Name	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	106194654
Sequencing Scaffolds	53
Novel Protein Genes	64
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	29
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	8
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	2
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Western Arctic Ocean, Canada
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	Canada: Western Arctic Ocean
Coordinates	Lat. (^o)	75.0007	Long. (^o)	-150.0027	Alt. (m)	N/A	Depth (m)	497
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000155	Metagenome / Metatranscriptome	1877	Y
F000423	Metagenome / Metatranscriptome	1156	Y
F001712	Metagenome / Metatranscriptome	648	Y
F003733	Metagenome / Metatranscriptome	471	Y
F004023	Metagenome / Metatranscriptome	456	Y
F006550	Metagenome / Metatranscriptome	370	N
F006551	Metagenome / Metatranscriptome	370	Y
F007053	Metagenome / Metatranscriptome	359	Y
F008755	Metagenome / Metatranscriptome	328	Y
F008888	Metagenome / Metatranscriptome	326	Y
F009522	Metagenome / Metatranscriptome	316	Y
F009921	Metagenome / Metatranscriptome	311	Y
F011446	Metagenome / Metatranscriptome	291	Y
F015154	Metagenome / Metatranscriptome	257	Y
F015245	Metagenome / Metatranscriptome	256	Y
F016796	Metagenome / Metatranscriptome	244	Y
F021393	Metagenome / Metatranscriptome	219	N
F021786	Metagenome / Metatranscriptome	217	Y
F025971	Metagenome / Metatranscriptome	199	Y
F030135	Metagenome / Metatranscriptome	186	Y
F033215	Metagenome / Metatranscriptome	178	Y
F034348	Metagenome / Metatranscriptome	175	Y
F036429	Metagenome / Metatranscriptome	170	N
F040680	Metagenome / Metatranscriptome	161	N
F042932	Metagenome / Metatranscriptome	157	N
F047901	Metagenome / Metatranscriptome	149	Y
F049697	Metagenome / Metatranscriptome	146	Y
F050311	Metagenome / Metatranscriptome	145	Y
F055787	Metagenome / Metatranscriptome	138	Y
F058220	Metagenome / Metatranscriptome	135	N
F059333	Metagenome / Metatranscriptome	134	N
F060086	Metagenome / Metatranscriptome	133	Y
F062674	Metagenome / Metatranscriptome	130	Y
F065855	Metagenome / Metatranscriptome	127	N
F065861	Metagenome / Metatranscriptome	127	Y
F067833	Metagenome / Metatranscriptome	125	Y
F070217	Metagenome / Metatranscriptome	123	N
F070306	Metagenome / Metatranscriptome	123	Y
F071317	Metagenome / Metatranscriptome	122	N
F072260	Metatranscriptome	121	Y
F076161	Metagenome / Metatranscriptome	118	N
F077370	Metatranscriptome	117	Y
F084344	Metagenome / Metatranscriptome	112	N
F088935	Metagenome / Metatranscriptome	109	N
F090498	Metagenome / Metatranscriptome	108	N
F092209	Metagenome / Metatranscriptome	107	Y
F092215	Metagenome / Metatranscriptome	107	N
F097497	Metagenome / Metatranscriptome	104	Y
F099434	Metagenome / Metatranscriptome	103	Y
F105006	Metatranscriptome	100	Y
F105356	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0315301_1002060	Not Available	2476	Open in IMG/M
Ga0315301_1003347	All Organisms → Viruses → Predicted Viral	2096	Open in IMG/M
Ga0315301_1005240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1786	Open in IMG/M
Ga0315301_1009087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	1405	Open in IMG/M
Ga0315301_1010417	All Organisms → Viruses → Predicted Viral	1321	Open in IMG/M
Ga0315301_1012855	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Flammeovirgaceae → unclassified Flammeovirgaceae → Flammeovirgaceae bacterium	1198	Open in IMG/M
Ga0315301_1014604	All Organisms → Viruses → Predicted Viral	1127	Open in IMG/M
Ga0315301_1017463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	1037	Open in IMG/M
Ga0315301_1018234	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	1016	Open in IMG/M
Ga0315301_1018690	Not Available	1003	Open in IMG/M
Ga0315301_1018992	All Organisms → cellular organisms → Eukaryota	995	Open in IMG/M
Ga0315301_1020048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	969	Open in IMG/M
Ga0315301_1021585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	934	Open in IMG/M
Ga0315301_1023185	Not Available	902	Open in IMG/M
Ga0315301_1028167	Not Available	813	Open in IMG/M
Ga0315301_1028987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	801	Open in IMG/M
Ga0315301_1029182	Not Available	798	Open in IMG/M
Ga0315301_1032175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	758	Open in IMG/M
Ga0315301_1032701	Not Available	752	Open in IMG/M
Ga0315301_1034855	Not Available	726	Open in IMG/M
Ga0315301_1036130	Not Available	713	Open in IMG/M
Ga0315301_1036399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	711	Open in IMG/M
Ga0315301_1037050	Not Available	704	Open in IMG/M
Ga0315301_1039102	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	685	Open in IMG/M
Ga0315301_1039740	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED161	679	Open in IMG/M
Ga0315301_1039777	Not Available	678	Open in IMG/M
Ga0315301_1041707	Not Available	662	Open in IMG/M
Ga0315301_1041891	Not Available	660	Open in IMG/M
Ga0315301_1042542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
Ga0315301_1046950	Not Available	620	Open in IMG/M
Ga0315301_1047337	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	617	Open in IMG/M
Ga0315301_1047960	Not Available	613	Open in IMG/M
Ga0315301_1048205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	612	Open in IMG/M
Ga0315301_1050125	Not Available	599	Open in IMG/M
Ga0315301_1052558	Not Available	585	Open in IMG/M
Ga0315301_1052884	Not Available	583	Open in IMG/M
Ga0315301_1053008	Not Available	582	Open in IMG/M
Ga0315301_1054417	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	574	Open in IMG/M
Ga0315301_1054714	Not Available	573	Open in IMG/M
Ga0315301_1054891	Not Available	572	Open in IMG/M
Ga0315301_1057635	Not Available	558	Open in IMG/M
Ga0315301_1059077	Not Available	551	Open in IMG/M
Ga0315301_1060511	Not Available	545	Open in IMG/M
Ga0315301_1062371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
Ga0315301_1063739	Not Available	530	Open in IMG/M
Ga0315301_1064160	Not Available	529	Open in IMG/M
Ga0315301_1064683	Not Available	526	Open in IMG/M
Ga0315301_1066063	Not Available	520	Open in IMG/M
Ga0315301_1066095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
Ga0315301_1066498	Not Available	519	Open in IMG/M
Ga0315301_1066956	Not Available	517	Open in IMG/M
Ga0315301_1071336	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
Ga0315301_1071495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → unclassified Pelagibacterales → Pelagibacterales bacterium	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0315301_1002060	Ga0315301_10020605	F058220	MQIFADCDDTLILYDSDTGIHPYVVRHGEPWHPNQPLVDALLETEHPVFVWSGGGAWYAEIIAGKLGLDFPCLDKDEITFELIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPNQL
Ga0315301_1003347	Ga0315301_10033471	F006550	MQAKINKREIDYKGQQLWLNPVDKTVYATDGAPTYSFSEVNGTPIYNYNTHFDAVKTAKDRLGTSYVHDAFVDQEFKSLAEDYVSDVKLGGRQRQAALRSSVNSAVDIVNVWETVLGKRDRVYAGKNLAKEIAVPNLLISIDTVTKFTGMEKLDEGMRARVKELPYTRSTFTAAKYGLKFIIHEEARLKNVHNVLQDSIQVASTKIEQRQSFDVLAITETNTAQAAGGLWDTFTSNTDHSINDPTIDIGIASLNIEGSGVGGKLNRVGMHQLTFAKYTGNTFLRGVASNGPRDYNYEPGTSDLVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKIQSETGRLITGAI
Ga0315301_1005240	Ga0315301_10052402	F003733	MKKALRTKICTYAIALLASIGFATPTLAGSSEFSGLFIAGHAELNVVAIPGTHTAGGAGVDSENGTQNVETTEGTIGGFAPTAGYEIGFNLPLGDTFFVTVAFADGGGKSAAIAKVDDANGISDVSLHASNPSWWYIAPAISIFDNSAVYFKWGQAHADLTAIGDLTGSPGNIEGDMWGIGTTSIASNGLFLKTEAGAIQYSEFKITGLGGDANTTVEGKPLVGYGHSKDQRY
Ga0315301_1009087	Ga0315301_10090872	F003733	LVSIGFASPSLAGSSDFSGIWIAGHAELNVVAIDGTHIENNTNSNGGKVTSGTIGGYAPTAGYEVGFNLPLGPVFFVTVGFADGGGKSADIVRANDAAENADVVVTAKNPEWLYIAPSISIFDNSAVYFKFGQAQVDLKAIGDVTGAPNNIDGDMWGIGTTSIANNGLFFKTEAGAIQYDQFTITGIGGNSSTIVEGNPLVGYGHVAI
Ga0315301_1010417	Ga0315301_10104172	F055787	EPEMVTKSEHEFVTETPRPGANLETIDKSLSKDYSPILKDARSNGFEGLSNVARNILNGKYYKPTQEEVGF
Ga0315301_1012855	Ga0315301_10128551	F090498	QEKVKRKSFKEVFSGEEGQDVIAMLANAHYVFRTSHAGDPYTSAWQEGQRTVVMEIINLVGADLEAIRKRIDMQEQARVERRA
Ga0315301_1014604	Ga0315301_10146041	F070306	SYYLDGASGTEATAAVRVIGKAKYPDEKDSDAYPIVECWINQHRDRYVTATASTA
Ga0315301_1017040	Ga0315301_10170401	F036429	MATVKSVEITNLDATPRTTLEAASAGGKLRVWMDTIAVGTGDLDDDDIIILGQVPSNAKIVSLRIYNDDLNSGSGTHNLGLYNGPQAYTISGTTVAAGAVIDEDCYATDSTAFRAATTTATGAEEQLIEVRNINTIANFVWEDGGISEDPKVPLRI
Ga0315301_1017463	Ga0315301_10174631	F076161	LKKVRRQVHWTRGPSNVSRRIRLTPRNRRAEAHRFMKSINFLSRCPKTGFRAFAEKPVAKSLLLPQFGGQKMSPQGASIPNRLTAWTIPQIAVDPKERSNLLSSPTNPDAPTGKPV
Ga0315301_1018234	Ga0315301_10182341	F009921	MSEIPNMISALVDDNKVEAETHFKNTMASKIGDALDLKRVVVANSLVKGQSNTSVEDSADEEV
Ga0315301_1018234	Ga0315301_10182343	F007053	MANSIRNSHQRSVIHCDTTDGAITLAELKATGEATPTKAHIVDIYWQTATSLTIDRGGTAVHAFTGTGHWNLGAAGAELSGLQTADLGITVSGASYAVIIVHKSY
Ga0315301_1018690	Ga0315301_10186901	F011446	METMMLGWAQSQSWWGIATTIIVIANGITMTLRDKYAENIPILGKIWPILNWLSLNIANNKNDEK
Ga0315301_1018992	Ga0315301_10189921	F060086	GARRPFELDSNLLLSSGRHGEDCKRQCIYLYDHETPLLDDLAD
Ga0315301_1019948	Ga0315301_10199482	F084344	VSVAVITVLAISDGLSTWIFDGQTISSKVAGRIGGAGGV
Ga0315301_1020048	Ga0315301_10200481	F076161	LTPRNRWAEAHRFMKSINFSSRYPKTGFRAFAEKPVVKSLLLPQFGGQKMPPQKASIPNRLTAWTVPQIAADPKERSNLLSSPTNPDALTGKPV
Ga0315301_1020263	Ga0315301_10202632	F088935	MTSIGGLDVAFGARMQVVRTNVMCLALASTGLANSTTVPKYILNTYKEALKGTVIEPDFLFIYEIADLEGSGYTTAAVANSLFNQDNSG
Ga0315301_1021585	Ga0315301_10215852	F003733	MKALRTKICTYALALLVSIGFASPSLAGSSDFSGIWIAAHAEMNVVAIDGTSTTPGQGVTVAGTGGSDNTEVTSGTIGGFAPTAGYEIGFNLPLGPVFFVTLGLSNGGGDSAAIAKVDDQNGTTDVTLHASDPTWYYIAPSISIFDNSAVYFKFGQSQIDLKARGDVTGSPNNIDGDIWGIGTTSIANNGLFFKTEAGAIQYDRFTLTGIAGDANRIVEGNPLVGYGHV
Ga0315301_1023185	Ga0315301_10231852	F059333	ESRADLLAMLRTHPGWNSLKEEFDKRCTDEMDRIVNGTLFDQESIAKHHISIGRVRAWKEVLEFPENVEKFGPPR
Ga0315301_1028167	Ga0315301_10281671	F025971	IPLYGQNKAGEALGSVSQSRGYLSITAGLTLDGTEGGVISIADTGACAIVLPTISAALHGLEYKFIMAVDAGASITITSTDQAGDYYQGTLAVHSVDADDGFAANGSSNNIITMNAGTTGGLLGSEVNLRAHYKTGWIAWGNVHGTDATGATPFSG
Ga0315301_1028987	Ga0315301_10289872	F003733	MKTLRTKICTYAIALLASIGFATATLAGSSDFSGVWIAAHAELNVVAIDGSSTTPGQGVTVAGTGGSDDTETTQGTIGGFAPTAGYEIGFNLPLGDTFFITVGFADGGGESAAIAKVDDGAPTSGTDVSLHASNPSWWYIAPSISIFDNSAVYFKIGQAHADLTAIGDVTGGPGNLEGDMWGIGTTSIANN
Ga0315301_1029182	Ga0315301_10291821	F030135	KFLQGPKNREELATLSSFTDIWHSTFAGCQFPDAILPDKEAFDLVAGPLN
Ga0315301_1032175	Ga0315301_10321752	F050311	MKALRTKICTYAIALLASIGFASPTLAGSSDFSGIWIAGHAEMNVVAIDGTHSQTTEAYEVGQGVIGGFAPTAGWEVGFNLPLGDTFFITVGVSDGGGDSAAIAKYDDANTAADVSLHASDPTWYYIAPSISIFDNSAVYFKFGQAQVDLKAIGDVTGA
Ga0315301_1032701	Ga0315301_10327013	F049697	MAIRPDKDVLNEHGKFNKFDKYKAEQKPDVMKVADISKMDIDISKARGYSKVDLGTARMLSGNPTLTQKELEQLKKAAKDK
Ga0315301_1034855	Ga0315301_10348551	F021393	EQVEDTQVAKSDDAVQRVETEKSFQETVKSGFDTLTDVVQSIAESQKATQEVLGGLDNRLKALETPSDLPLTPKGTAAGDDVGAKVTVPRDPYPQGTQAGLDDDRNGEGKPASDKGGLKMQKKSDDTELIEKAEHTFSTETPRPNAALETVDKSIKDTSMILKDARAEGFEGLSTVARNILNGKYYVPSDDEVRGF
Ga0315301_1036130	Ga0315301_10361302	F042932	EITKSDEEQDSYENTVAKSIDTLADVVQSIAESQQGVEKAVSEVIDRVKALETPSDLPLSPKGTQGGDDVGAKVTAPNDPYPVGDQVGLDSDRKNKNPPKKDPSGLKMQEKPVNKAEEDYEPEMIQKSEHSFSTETPRPNSAPETVDKSFTKDFSPILKDARENGYEGLSIVAQNILSGKYYKPTPEEIGGF
Ga0315301_1036399	Ga0315301_10363991	F003733	MKALRTKVCTYAIALLVSIGFASPSLAGSSDFSGVWVALHAEMNVVAIDGSSTSPGMGVTVAGTGGSDNTETTQGTIGGYAPTAGYELGFNLPLGPVFFVTLGLADGGGEKSKIAQVKDQNDITDVTLYASDPTWYYIAPSISIFDNSAVYFKIGQAQLDLKAAGNVTGAPNNIDGKIWGIGTTSIANNGMFFKTEAGAIQYDKFTLTGIGGDANRVVEGNPLVGYGHVS
Ga0315301_1037050	Ga0315301_10370502	F062674	MANPMYGQNKADSAIQDGKCSVIVAGDDITLTAAQTGSTVFLNNATATVQLPAAAPGLNYKVILGIETTAGCDILAKAGDAFFGIIRLFCDTADNTGVPQQISHATAIGTVASYDTMDLVAATATIGGMAGDIISMIAVDDTAWHVTADLTTTANDPGTVAVIVAS
Ga0315301_1039102	Ga0315301_10391021	F016796	MTYGFDDVTFTSIGTGVAETQLNSGTSLSAPDPAHAFNAVIPYQMELGAFSTNQSLLTAFRIQSDDVAVEPKKFVLPNINTGDAAFTSVAVP
Ga0315301_1039102	Ga0315301_10391022	F001712	SKGAGVLAFLSNVTGSDMAASTGQPIGARAQNFGNSLLGRITGFTPFKNAAGANTPQTIGIDGIFNKWSGIGAASLLYGMLPIRKLPHKGKASTLGKSLLTAGILSGIFMPTNNRSSNLISSSPAMTVSTSEVSYT
Ga0315301_1039740	Ga0315301_10397403	F067833	VLLHPVKIKDYGIEAMANVSQHHMSVMDQVNFVTLDGVLTVPMVEMKA
Ga0315301_1039777	Ga0315301_10397771	F070217	TIALQTTSQAVEDTTQAVENTTQAVVETSQVEPEQIKKISTMVLANRITNVSGFERMIIGDLLGDEMMETSAASMVISENQAKEAMGAAFDPNCFSDSCAISIGKSFNLSNVITFGVINVRKIANPAEVDTLLAVKDSLITATIIMKNFNIGTGEIVSGMNFPFEGDADKLLMSARRMVWSAVGVEPPPGRFPEDLIDNKVSLKKKILDFYYGTVVPWVQDNTEIA
Ga0315301_1041707	Ga0315301_10417071	F092209	MNKIKYLGTLIGITTVLVILGMTTTHVMADSPTDADGESQESGEIGHHEYIGESGEIEKCEGMVYESAEDAEAAAIENGCSGYHKFDKDGTVWYMPDC
Ga0315301_1041891	Ga0315301_10418913	F034348	MEQKQTVKAPMSVRVTEKAMPLTKWFAEQYYQTHALMSKDPRYRSLPSYNQTSCIATVMIATNAALDSDRAKTRAEK
Ga0315301_1042080	Ga0315301_10420801	F077370	FSNSTGSPNMSTNLTDSMILQFTEYADLSRIYGLVKLKKIQLGFTRASNFIGGASGAIQNTPSFFLQASTIPYSAGSVSLQRSVAQSDNSVEVDLQTYSPTAFSIMLPPHIVSNNRTNNQTFAFGSQTWVSTKLNNVQNFPDLFLNLGSLAIPSFEASTPNTSFLIGQIHGRMQLSFAGPIVG
Ga0315301_1042542	Ga0315301_10425421	F021786	MTTHFSNGVTNVIGKSGGTSLFSGIKQPLITGGTAPQEWAFQDDFVLFSETTLSPWTITKTGSAYLNAQYPQGWLRIGDAVPAGAEVNGIQSEACFQINTNKKWYFETSVAVTDVTEYNTFVGFGANAYTDPVAVPDDGIGFSHLEDTTSIQFVSRKNGAGVSFDMLEAGSTFAQLDSTVATQSATAYGMPDNNVRLGFLFQPAGSDPT
Ga0315301_1045709	Ga0315301_10457091	F036429	ATTKSVEITNLDATPRTTLEAASAGGKLRVWMDTIAVGTGDLDDDDIIILGQVPSNAKIVSLQIYNDDLNSGSGTHNVGLYNGPQAYTISGTSTAAAAVIDEDCYVTDSTAFRAAVTEPVELLAETRNINAIANFVWEDGGLSEDPKVPLRIAVTMSATGTAIAGDITIVVKYTID
Ga0315301_1046950	Ga0315301_10469501	F015154	AAVVKNYTATVSSTASSGSTVTGQSSYYLLAASGAETELACRVLGRAKFPDEGNNDAYPIVEVWLNTHRDRYVTATASTA
Ga0315301_1047337	Ga0315301_10473371	F004023	GKPYXWLFTDKTLSTDTMVRLAYGHYLAAFFMFYLGLIHGIDMHYDWKNEATFDGIDAEMVWWDEALSSEISHAMDVLVIVSICSXFIYVEPEALSYEIFMXGDVGMVTDVRYYGVAPHXYFRPFMAXLIACPHHKTGIFGLLFFFLILFYQPTLHGTTEQNNFNKRTLLFMKSKLKCSKFFTSSYINLEINLYHHFTYGIFISS
Ga0315301_1047960	Ga0315301_10479601	F099434	MPVSKGNFVHGTNMELEGVASSTFTVDFINTMASETADLSSGSAVAGLEATRAVIGRYVNILSEGPLVDSGTQKTYTVRTDTLGTLISAG
Ga0315301_1048205	Ga0315301_10482051	F050311	MKALRTKICTYAIALLASIGFATSTLAGSSDFSGIWIAGHAEMNVVAIPGTHTAGSGGSDSSGGTENVETTEGTIGGFAPTAGYEVGFNLPLGSTFFVTLGYADGGGKSAAIAKVDDEAGTSDVSLHASNPSWYYIAPSISIFDNSAVYFKIGRARADLKAIGDLTGSAPSGMDGNMWGIGT
Ga0315301_1050125	Ga0315301_10501251	F072260	LGQEAIDARFFTPDQKPHLLRYFERCMKKYPGIVIQKEIKNFGNSRKCPEIRMYYVGSKYQYSVSAQENIILRPREEGGTFDTPLDSLKRHTRKILKRLPPMLMANGKKLPRLLTRLDMGYIVNGNYNPFVNEVEYVPSLYSEDCACAYNKGLGEQALIDARLGDQMVKITKLYVK
Ga0315301_1051651	Ga0315301_10516511	F009522	MAKAMKAAKAMKAMKRVSKFAKGRLAKSVVFRGTKASTTGGLEKSDLTRSKSGKIVSKKASANGKKAYNRIKGWTVAVTKARKFLNIKGFVAVKKGTPLYKKAREFYTN
Ga0315301_1051652	Ga0315301_10516522	F040680	MQTDVKQTIAVAATAQLQKYIKTTATNITKARIMAISAQASAANASVKIYDSVAGTTASDLVAELKFGTADGEWTHFYVPGQGIYCDTGMYAVLSGCDFLVVTGTFT
Ga0315301_1052558	Ga0315301_10525581	F105006	MNKFVLLNANGVARSGFYLEITEFPQGSTPGHAVYVDARGTEDNINFVYNAETDKLDAWHVKSPSNKFTMTPVLAGQRVVGLDVQFSHLPNFVAHFALDLSTDEEEVVYDVLAPAVFLEELSIVNF
Ga0315301_1052884	Ga0315301_10528841	F065855	ARLKNVHNVLQDSIQVASTKIEQRQSFDVLAITETNTAQAASAAWDTFVSSTDRSTGDPTVDIGIASLNIEGSGVGGKLNRVGMHQLTYAKFTGNTFLRGVASNGPRDYSYEPGTSELVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKIQSETGRLITGAIT
Ga0315301_1053008	Ga0315301_10530082	F105006	QLVSFRIDSAIGPHANCYSSLSYSTPLQSSIDNQTMAMNKFVLLNANGVARSGFYLEIQQFPQGETPGQAVYVDARGTEDVIKFIYNSETDLLDAWHVKSPNNKFTMTPVLAGQRVVGLDVQFSHLPNFVAHFALDLSTDEEDVVYDVLAPCVYLEELSIATF
Ga0315301_1054417	Ga0315301_10544172	F065861	IIVIRRKITLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNSLVLNCLT
Ga0315301_1054714	Ga0315301_10547141	F008755	MNKSRVSRDLWRKVFNDNIINLSDGDARKQVVKDFLDDPVNKKAGWKSKDARFFRLGFQKVAKENNFNVMNIGVTPTPSRSQTNKGTMNINVKTKQKNPAPIAESIKPPTEGEKKFGALPQTPQLEQQQDQAVQYSAQ
Ga0315301_1054891	Ga0315301_10548912	F105356	MAIGVWLPGERYRIYEPGTDHEITVMIPGADSIYDADELNEICHWQREEAEKEWQSKEAKVPLTRSQQHDLGGTLVEIRASKEF
Ga0315301_1057635	Ga0315301_10576351	F006551	NAEETALGASTTGSYDPWAANATIDRDSSSTFDCTVESASGTIGTNGVLTDDTLRAFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGESLVQVDVNGIQTFRGTGVGIHVDSIYGIPFIPSKDAPSDSGDASEIGRLFAFDTSDAEGYGYPRIGIQIAIPTEYYEATRRSPAYPFV
Ga0315301_1059077	Ga0315301_10590772	F008888	MTTKKQAPLGKSVKIGIPSQNLIRDPRAKSSIRGSGQRIATGDKVTVKGTGAARKQT
Ga0315301_1060511	Ga0315301_10605111	F033215	SVLERDALSVVNEMLVLVLVQVSATAKLPPRLRVVFEVLNKAPLANVAPPGRPRVPPVEERVPAVTLIPPLRDRSALPVTIFSPEASRVTGCATLSLDILSSSVKAKLAKSSVPTDREALSSIVEFAAKRSVVELSGNTPPKFCTPDTSRMPPESVSALAFVVNVVPFVFRVAPVSDKAF
Ga0315301_1061936	Ga0315301_10619361	F009522	MAKVMKAAKAMKAMKRVSKFAKGRFAKSVVFRGTKASTTGGLSKSDLTRSKSGKIVSKKASANGKKAYARIKGWTVAVTKARKFLNIKGFVAVKKGTALYKKAREFYTK
Ga0315301_1062371	Ga0315301_10623711	F097497	MPKKPRKRTTPKQRDPSWQLRHALGQKVEPNPKAYTRKRKHPEEDNLEFISLEP
Ga0315301_1063739	Ga0315301_10637391	F065855	KIEQRQSFDVIDVVETNAAQAAIAAWDTFVSATDRSTGDPTVDIGIASLNIEGTGVGGKMNRVGMHQLTYAKFTGNTFLRGVASIGPRDYSYEAGTSELVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKIQSETGRVITGAITP
Ga0315301_1064160	Ga0315301_10641601	F072260	IDAEFFEPKQKGPLKRYLARCMKKYPGIVIQKEIPNFGNSRKSPELRMYYVGNKYQYSACANENTVVRPRQEGGGFDVPLESLKRRTRSILKRLPKIVMRGKNLPRLLTRLDMGYIVDGNYNPFVNEVEFVPSWYSEDCAHHPDRLIDVSLGDQMVKITKIFAK
Ga0315301_1064683	Ga0315301_10646832	F071317	AVGLITLFAGMTAAPFIPLDDCNMPCCAGIATSCCEMDREITCATMSDCGSSVFMLIVSGPFHKSELKSSDIFSQRFVTDLGIPKIETNYIACLGNFDPGLIASLNLPLLI
Ga0315301_1066063	Ga0315301_10660631	F000423	YLTLFVRLLMTKDAIFYIKYYAKKHDMVIERKATLDENCFEGRHKKFGYPYKKYIDVWATEEINNGEPQYRTASKKWEINQTQTLNQ
Ga0315301_1066095	Ga0315301_10660951	F015245	LNRMFEEVPGSNKFVEIMFGYHPKASIQHGIEDPMHWELISKMPWAGLGTDRQNPEFRHMDGSIMNGQLYIDGKLLVDKYGMLDRSLLYHPDVMEVAKEFGDPVAILAPVSHAAHGSNTQ
Ga0315301_1066498	Ga0315301_10664981	F105006	MNKFILLNANGVARAGFFIEIQHFPQRSAPGQAAYRYVDAAGREDNVAISFVYNFETDKLDAWHVKSPSNKFTMTPILAGQMVVGLDVQFSHLPDFIAQFALDLSTDEEEEIVYDVLAPIVYLEELS
Ga0315301_1066956	Ga0315301_10669561	F092215	QTPNDIALAETFHHSEDISGIRQDAGLIQLTEAHYASFVDDDYCPLAGPALLVPKVIRLADLALGMEVGQLGVGKAAQRCAPSTVGRNCVAAYAQNLSIIILEPLVFLPERGRLRGSTRCEVEYVERKNNYLLALVVGQGNVPIGGGKFEIGGYIANFCRHIPAFIK
Ga0315301_1070197	Ga0315301_10701972	F000155	KFFAAATIATVSANTFDFMGEDQLLAQLSSTVKSAQQSEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQP
Ga0315301_1071336	Ga0315301_10713362	F047901	DASIDILSQDALLLPMKYYRIRAIVQGRLYIEIIKAEDLDSAFKILVKKAVDGLLKVKEDVGFYQRKQVQITYEEVTDGATTISANEVRPGTSMGKESFDILTXGNEMDRY
Ga0315301_1071495	Ga0315301_10714951	F050311	KNIMKALRTKLCTYAIALLASIGFATPTLAGSSDFSGVWIAGHAELNVVAIDGTHSQTTASHEVGQGIVGGFAPTAGWEVGFNLPLGDTFFITVGFADGGGDSAAIAKFDDSKGVADVTLHASNPSWWYIAPSVSVFDNSAVYFKIGQAKASLKAVGDVTGAPDNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300032161: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences