NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300031914

3300031914: Enriched hypersaline water microbial communities from Club Lake, Antarctica - Round 2 flow cytometry Nha-CFC



Overview

Basic Information
IMG/M Taxon OID3300031914 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0135173 | Gp0347961 | Ga0326478
Sample NameEnriched hypersaline water microbial communities from Club Lake, Antarctica - Round 2 flow cytometry Nha-CFC
Sequencing StatusPermanent Draft
Sequencing CenterThe University of Queensland
Published?Y
Use PolicyOpen

Dataset Contents
Total Genome Size34916470
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameAntarctic Nanohaloarchaea
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Water → Antarctic Nanohaloarchaea

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biomehypersaline lakelake water
Earth Microbiome Project Ontology (EMPO)Unclassified

Location Information
LocationClub Lake, Antarctica
CoordinatesLat. (o)-68.5417Long. (o)78.2467Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F047394Metagenome150N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0326478_101093Not Available3654Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0326478_101093Ga0326478_1010932F047394MTASTQPTETRAQTTNGSFQTDVSALQEMTERAVEILDSHGEPVTIARLVGTVVRLGARDEYRFETTVRVAQQYIDEECGGVDR

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