Sample 3300028096

Basic Information
IMG/M Taxon OID	3300028096 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0294651 \| Ga0256362
Sample Name	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	128613917
Sequencing Scaffolds	53
Novel Protein Genes	64
Associated Families	44

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6
Not Available	25
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	3
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	4
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Louisiana
Coordinates	Lat. (^o)	29.8571	Long. (^o)	-89.9778	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000212	Metagenome / Metatranscriptome	1580	Y
F001904	Metagenome / Metatranscriptome	619	Y
F002238	Metagenome / Metatranscriptome	579	Y
F006468	Metagenome / Metatranscriptome	372	Y
F007472	Metagenome / Metatranscriptome	350	N
F009078	Metagenome / Metatranscriptome	323	Y
F010623	Metagenome / Metatranscriptome	301	Y
F016245	Metagenome / Metatranscriptome	248	N
F023359	Metagenome / Metatranscriptome	210	N
F025755	Metagenome / Metatranscriptome	200	Y
F026607	Metagenome / Metatranscriptome	197	Y
F029333	Metagenome / Metatranscriptome	188	Y
F030776	Metagenome / Metatranscriptome	184	Y
F032522	Metagenome / Metatranscriptome	179	Y
F032540	Metagenome / Metatranscriptome	179	N
F033729	Metagenome / Metatranscriptome	176	Y
F042749	Metagenome / Metatranscriptome	157	N
F044315	Metagenome / Metatranscriptome	154	N
F047008	Metagenome / Metatranscriptome	150	N
F050983	Metagenome / Metatranscriptome	144	Y
F051067	Metagenome / Metatranscriptome	144	N
F052593	Metagenome / Metatranscriptome	142	Y
F053868	Metagenome / Metatranscriptome	140	Y
F054052	Metagenome / Metatranscriptome	140	N
F058592	Metagenome / Metatranscriptome	134	Y
F059663	Metatranscriptome	133	N
F061789	Metagenome / Metatranscriptome	131	Y
F061852	Metagenome / Metatranscriptome	131	Y
F064751	Metagenome / Metatranscriptome	128	Y
F070194	Metagenome / Metatranscriptome	123	N
F081088	Metagenome / Metatranscriptome	114	Y
F082153	Metagenome / Metatranscriptome	113	Y
F082176	Metagenome / Metatranscriptome	113	N
F086577	Metagenome / Metatranscriptome	110	Y
F087401	Metagenome / Metatranscriptome	110	Y
F089936	Metagenome / Metatranscriptome	108	Y
F092088	Metagenome / Metatranscriptome	107	N
F094929	Metagenome / Metatranscriptome	105	Y
F095369	Metagenome / Metatranscriptome	105	N
F099393	Metagenome / Metatranscriptome	103	N
F100446	Metagenome / Metatranscriptome	102	N
F101271	Metagenome / Metatranscriptome	102	N
F102558	Metagenome / Metatranscriptome	101	N
F104576	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0256362_1003009	All Organisms → Viruses → Predicted Viral	2593	Open in IMG/M
Ga0256362_1015469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Lautropia → unclassified Lautropia → Lautropia sp.	1194	Open in IMG/M
Ga0256362_1016421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158	Open in IMG/M
Ga0256362_1021216	Not Available	1017	Open in IMG/M
Ga0256362_1022742	Not Available	979	Open in IMG/M
Ga0256362_1025853	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
Ga0256362_1027791	All Organisms → cellular organisms → Eukaryota	881	Open in IMG/M
Ga0256362_1028800	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	865	Open in IMG/M
Ga0256362_1028887	Not Available	863	Open in IMG/M
Ga0256362_1030226	All Organisms → cellular organisms → Eukaryota	843	Open in IMG/M
Ga0256362_1032542	All Organisms → cellular organisms → Eukaryota → Sar	812	Open in IMG/M
Ga0256362_1033409	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	801	Open in IMG/M
Ga0256362_1034735	Not Available	785	Open in IMG/M
Ga0256362_1036846	Not Available	761	Open in IMG/M
Ga0256362_1037899	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	750	Open in IMG/M
Ga0256362_1038197	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
Ga0256362_1039777	Not Available	731	Open in IMG/M
Ga0256362_1039946	Not Available	730	Open in IMG/M
Ga0256362_1040180	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	727	Open in IMG/M
Ga0256362_1041988	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	711	Open in IMG/M
Ga0256362_1042176	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	709	Open in IMG/M
Ga0256362_1042265	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
Ga0256362_1045160	Not Available	684	Open in IMG/M
Ga0256362_1045184	Not Available	684	Open in IMG/M
Ga0256362_1045715	Not Available	679	Open in IMG/M
Ga0256362_1046372	Not Available	674	Open in IMG/M
Ga0256362_1046541	Not Available	673	Open in IMG/M
Ga0256362_1046632	Not Available	672	Open in IMG/M
Ga0256362_1047633	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Fragilariopsis → Fragilariopsis cylindrus → Fragilariopsis cylindrus CCMP1102	665	Open in IMG/M
Ga0256362_1048895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	655	Open in IMG/M
Ga0256362_1052516	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	632	Open in IMG/M
Ga0256362_1052536	Not Available	631	Open in IMG/M
Ga0256362_1056305	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	609	Open in IMG/M
Ga0256362_1057776	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	600	Open in IMG/M
Ga0256362_1061528	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	581	Open in IMG/M
Ga0256362_1062888	Not Available	575	Open in IMG/M
Ga0256362_1064751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
Ga0256362_1064908	Not Available	566	Open in IMG/M
Ga0256362_1064935	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	566	Open in IMG/M
Ga0256362_1067642	Not Available	554	Open in IMG/M
Ga0256362_1068158	All Organisms → cellular organisms → Eukaryota	552	Open in IMG/M
Ga0256362_1068745	Not Available	550	Open in IMG/M
Ga0256362_1069183	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
Ga0256362_1074402	Not Available	528	Open in IMG/M
Ga0256362_1075209	Not Available	525	Open in IMG/M
Ga0256362_1075220	Not Available	525	Open in IMG/M
Ga0256362_1075797	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	523	Open in IMG/M
Ga0256362_1077047	Not Available	519	Open in IMG/M
Ga0256362_1078367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	515	Open in IMG/M
Ga0256362_1078393	Not Available	515	Open in IMG/M
Ga0256362_1079908	Not Available	510	Open in IMG/M
Ga0256362_1080916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506	Open in IMG/M
Ga0256362_1081774	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0256362_1003009	Ga0256362_10030091	F081088	LLNNKPKDSSNEEFIKAWNNSSYTLEALYKTLLVLKEDINSVKKDDFDCPNHYAKLAFNLGQIKAFDLIISMLPDTAKR
Ga0256362_1015469	Ga0256362_10154692	F101271	MRLLFDFSEAIAHQREALAKRDWAKLQQSIQALQQAMHQIASFPGGAEGVRHQLVASEGGARETADRLIEKVAIERRSSAELIRLQLQRLQALHTMTSLDEETTTYSESGTSKGRIGRLSTWV
Ga0256362_1016421	Ga0256362_10164212	F030776	GTSQGAGFITHGYVEYPMVTNVNADVVAGDLIAADFMGRARKLSTADMASYPWLCVGKVVEVEKFATNFDDGLLSYMQLPSDPGALKTVYEITREGTYKNKLGIRSNLDVTNVVGAFRVNLTL
Ga0256362_1021216	Ga0256362_10212161	F101271	VDLISSKVEMTTDLPIGHHERDAMLLLFDFSEAIAHQREALAKRDWAKLQRSIQALQHAMHQIASFPGGAEGVRHQLVASEGEAREAADRLIEKVAIERRSSAELIRLQLQRLQALQAMTSLDDDAGTYTESGATKG
Ga0256362_1022742	Ga0256362_10227421	F101271	VDAIRLLFDFSEAVALQREALVGRDWTKLQQSIQSLQHAMQQISSFPGGAEGVREQLLASEGVVRERADQLIERVTIERRSSAELIRLQLQRLQALQTMTSFEEDA
Ga0256362_1025853	Ga0256362_10258531	F002238	PEFQRGWDAALLAVRAWHESQAKQTLIQARRSRFPKNLEREAEVHQRSAELIGTLSPDDV
Ga0256362_1027791	Ga0256362_10277911	F007472	QLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEFSYTRVTASDSSLASSLYNYTQTNFDMFGQTLNVQSANTKIVRTSQQTYAQLGASGVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLIVVSAEIIAFLAFLGLSDKIATDSPNCLSGPCQKFADTVTTQLGQNVITINSEAAVPVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256362_1028800	Ga0256362_10288003	F050983	AGAYFQTVTVTAVDSGNGTVVPAGIYVMFPSANVTVLANNGSSNATVMAANTGGVVISDGVNVYVKNSSGNANVTMLDINGGQAAGETYA
Ga0256362_1028887	Ga0256362_10288871	F044315	MLALVVCGLVMFVNNGSARAQPLDLLQQTCSGCLAKISKKINALSVDQQHMAQQFESELTQLQQSVSKLKAEITHVNPRSGLVRVIKSEVPKAVSPAGASEAAIAVSTQSNHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDLVSGDVEFFRFSHPWTPPAMK
Ga0256362_1030226	Ga0256362_10302261	F007472	TVFAVLIAAMAVDWYSYKVEYSYTRVSASDTSLASSLYNYTQTNFDMFGQIVNVQAANTKIVRTTQQTYAQLGATSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILIIALLVVVSAEIIAFLAFLGLSDKISSDSPNCLSGPCQKFSDTVTTQLGQNFITIGNEASVAVSLQSVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256362_1032542	Ga0256362_10325422	F054052	LLGVASAIYPDDHWSFSKKLTSANIDDEIKAAVDGGKTMFVRLIASAG
Ga0256362_1033409	Ga0256362_10334091	F042749	IFAISHRPITTMIGATWMKYAAVPCLLLLAAVAVLYTDSSQQSAEPNLDVALVSSSQQTQSLALFKHAAIEDVYVYAGPEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISAKGFTDLRAYVAAGNNVVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGGFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSWVRVIHA
Ga0256362_1034735	Ga0256362_10347351	F044315	MYVNVGGSEPVDLLQQTCPDCLAKISRKISALSSDQKNMAQQFEVELDHLQHSVSMLKSEIARVNPRSGLVRVIKSASLTPTAAPLPSPVRSSVIVNTPVDHDSEYDESGFKKGANRAKNMRDKKYGAFPNRWVDKDTVEAFTDHIYGPDPTTLDRKGVEREGYFTIAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYAGDHGVRDYFEVQDLVNGDVEFFRFSHPWTPPAMK
Ga0256362_1036846	Ga0256362_10368462	F009078	MVRLSKPAQTRESPFTDKTGGGNNDAGCCGKNVCLQARKGNLSRWKVTGGADFTAKPIRLTGMRKGSVLV
Ga0256362_1037899	Ga0256362_10378991	F092088	FKERMRRGETIVSFPRTLRMEEKSAMKSKGATIFKELKQAEVFPDLRMVLYLIYEKHNPDSFWKPYIQVLPTDYNNIMSLTDAELRKLLRRPGCENTHNLGVQMRRTFNRFFNQYKSLVEPNYPEMKFSREDLLWGFNTLVACGWGSGSDGTGDKMMVPFSELPVHRRESAQKATNRGFISAAKEYQAGEELTFDYGLLNDAVLAFYGIPTPDCRGLRR
Ga0256362_1038197	Ga0256362_10381972	F053868	VNFVVRVKGSTKVKYQGEWVKLNQIRFYRNERRRNLGCIDYCQNSPHRLHVTISRVRDKKGQWGVWYLVSNQRLRAQQAAKEYGFRFGCEEGFRDVKWDLGFKDSRVRQIHAWSRLFALFAIALSALTTLAMALLVRNRTRARDLLRRVASRRLARCELSLIAATIALIKQEPALLDELSMSAKLRLLYDL
Ga0256362_1039777	Ga0256362_10397771	F047008	MEKMTKNQKIIRKDLLAYVLESGGIVHTRPPQGDENGFALVAMPCAHNARHAKFYDVSFAWCADNDKFDRKVGEFLALERYMNCETTKLPGYIIDNMLEMDLVH
Ga0256362_1039946	Ga0256362_10399461	F089936	MKKALIGMAAGAMALGASVVPASAGYLGESDDLTLWDGIAGTDGGSTDTPAQIAALCNDGQDDIFEALVLTGGWASRLDTDGNGKPRYTVFQPYDLILNGLLGALGLEISDLNSQPAVVQGILADHIANGSFDENELEDTDLTRITMRSGFVATLTESEYDVMFPPAATFGERSIYENVYIEGVKIEDGDQYANGWLYCIGGIIDSTPQVSHEGLNSEDTPNDGTPGGTNSLPDT
Ga0256362_1040180	Ga0256362_10401801	F006468	MLDIKNIPLDKINQNKQINARFVRLKNLLDVKMASYLRYLGTKNAVNRATDYHYLCLAVTDSTAPVNGIDYIHPSVKPVVDYATAVITKGLMPNGEINFEFVAEDEQDEVAARQATDMVSKVVNQMNDAHFILERWVMDANMHKNGMMMIKPVREQIVRYIETEGTLEQLRAFEAQAAESGLTALRQSRRKVNVDMMKVLAEVQELM
Ga0256362_1041988	Ga0256362_10419881	F023359	ISDPTTLRQNVVESYATFDSNSGGFVRGYFKTSQAFVVIVLVISFVLTVLLALFQLDRVRNWFIFSVGMSFTRIAITLLAALILVSSVIAFLSFLGLPSGFKEEIPNCVDGPCREFSSSNKLADLVETQGVNTYQLVNTRTWGPVEGWFIVLGIIPISVILLALIVLNKFPLPIDSEASSGEAL
Ga0256362_1042176	Ga0256362_10421761	F058592	MVLLHVPSARKKYVVVVAGATVTLLPVPTAVPPQLPLYHFQLEPIPRLPPLTLNVVFLPKQIVVVPLIEVAGTEVS
Ga0256362_1042176	Ga0256362_10421762	F058592	MVTVTLLQMVLLQVPSARTKYVVVPAVVPVILSDDPVLIAVPPQLPLYHFQLAPVPRLPPLTLNVVVLPRQMVLVPLIEVAGTEVS
Ga0256362_1042176	Ga0256362_10421763	F058592	VVVAGATVTLLPVPTAVPPQLPLYHFQLAPVPKLPPLTLNVVFLPRQIVVVPLIEVAGNEVS
Ga0256362_1042265	Ga0256362_10422651	F087401	MRRQRGLVGVIALATLVSVGGIASTASARVTTEESASILVFPKVVADGNRDTIIQITNTSNNMRHAHCFYVNAAPTDPDRPISLNESDYNPPLWTETDFDIWLTKQQPTHWVVSQGRRFDPTDATCLNAANNSANNCDPNTSGTGDADCCDAGFDPGRIPPTAPDFIGELKCIEVDASGYPVPGNSLKGEATIVEPGNETDVSKYSALG
Ga0256362_1045160	Ga0256362_10451601	F099393	MLVERGMPMRRFLPHGETQAPDSACGQVTGSGRWSGRVKKVVFFSVCLPALLIALGAGDSLNLAYGQSESNAAVPTAVRAPDSGLSDQNRPARDRSEPTVTGAAMHVALFVPRN
Ga0256362_1045184	Ga0256362_10451841	F025755	LMKNKIVKTIGMLSLASLMSTSAFSQITISGYAEVGMITGSNQQTRSTAHSKGLGSEFLVQVAGKGTMSNGWTFSGYQNFDTDEVGNGVDAANVNPMTTRALEISPNKDFKLFYTYDGVYGGEIARTAIPVVTERPVDLTGLSGLAEFIDVTSGGHAVGAEALNLGPAGRFSIAYNPNLNTTQSASSDRVSSATNFLGAAGANNLSGYSFGYSVTPGPIRVAAGYTK
Ga0256362_1045715	Ga0256362_10457151	F089936	YFMKKALIGMAAGAMALGASVVPVSAGYGGVDNIWDGITDDEFCDTTDDDIFESLVLTGGWAERLDTDGNGDPRYTVFQPKEIILAGLLDALGLEVSDLNSQPATVQAILADHIANGSFDENELEDTDLKRITMRSGFVASVSGTGDNMAVPRVIYSNVYVAGSLIVAGGQHDNGWLYCLMGIIDSTPQEAHEGLNSEDTPNDGTPGGTNSLPDTL
Ga0256362_1046372	Ga0256362_10463721	F070194	FVVFDTETSCQAFPVYDMAWRIVDRQGREYNRGSYFMPDIIERITPIFRKHEEYPEYVAKGHVEQRFYQDVKDTFNRQVKTLREKGHRILLVAYNADFDRKALKRTAELMGGSRRSRFFRFEPEWVDLWQYWAESAPLHYTSERLTENGNWKSSLEEVFRFENHNPEGYAEKHTAWSDTDDAISVLEKVIRRKKRLPVYKGDAWMPGGWRALQKRCPGPGKAAC
Ga0256362_1046541	Ga0256362_10465411	F089936	PHNRKAYFMKKALIGMAVGAMALGASVVPASAGYLDESENLWDAIAGTDGGSTDVNQSPLGALCNDGQDDIFEALVLTGGWASRLDTDGNGKPRYTVFQPYDVILNGLLGALGLEVSDLNSQPAVVQGLLADHIANGSFDENELEDADLTRITMRSGFVATLSNSEYDIPGALLGGTFGERSIYDNVYIEGAKIQDGGQYANGWLYCIAGIIDSTPQVTHEGLN
Ga0256362_1046632	Ga0256362_10466321	F086577	LLAPLQELQARAEQMRQQATNGSVLLLGNVVDALRLPGFDSKVLNPGVAGLPDFGSFGLTDLVTEFAAPANGSSFSRLQTLGATVIATQGWTVVGDVRVVSFAFSVLIETDGAGNRKFSGSVQGSISIGRFTFGAYVPFNKPGQQMEFMLPVVTVNGVNVNELFGVGTKVGVSAADVNDLLSTDGAEIKARLKAELAQKSAELKALAKEQLRANLLAPLQELQ
Ga0256362_1047633	Ga0256362_10476331	F054052	KVLLLAALLGVASAIYPDDHCSFSKKLTSSNIDDEIKSAVDGGKTMFVRLIASAG
Ga0256362_1048269	Ga0256362_10482691	F100446	EAGSDAHKGQVTTKLIKLLPQTNAEQKGDTCMLLDQLKQVDKLPRTGGKSFSFSTFIKQEGERLQGTIARKGNEWALESNDDGDVIFTSNGVSCKAPKVIGRTYKNIVAVSSATEQKIKIVVDGKEACSVAGKLFTEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGLFSKEKPECIGA
Ga0256362_1048895	Ga0256362_10488951	F052593	MAYIYPAPGVANVELTLEIEVSGDTNALAIPALQDITINNANDVFTWTQLDSGSKFNIPTTASNSIDMNLVVDQTVFFGSGSGADVAVNKGLFGLSKDKKLISFSLYMGDTNSGSAGKTISGTGYVVGLAPTVSADSPVWVTPVSITV
Ga0256362_1052516	Ga0256362_10525161	F023359	FKTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLLSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLLEVQSGTTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0256362_1052536	Ga0256362_10525361	F082153	MVTPLELPAVAAPMVRPVTVTVTPLLAATAALVVTTIWVLVGVATAPPLTPLIVAAGDPVLEKKPDGYVSVMVLPIASAPPAVVVNEKVAAAELLPAT
Ga0256362_1052536	Ga0256362_10525362	F082153	TVTPLLAATAALVVTTMWVLVGVATAPPLTPLIVAAGDPVPEKKPDGYVSVMVPPIASAPPAVVVNEKVAAAELLPATRSDVAIANEGLVT
Ga0256362_1053244	Ga0256362_10532441	F082176	MSIPSKIKVEPKQVVLLESISTSVSADWPVVDDHYACVLSSGQSQSLVPLVWTGSGSVGTCTFRDTSMFETGTASLAIKHDVHEFSVDAGTLQLVPSVSVLKISPSTVEAGATSVLEIEVDADCDCRAGLECRVGQARAPAVCSAGSRTLRCAVVPVGAGVRAFVLMMDGQLLSRGAAQVNVFESLISNVAVRPSAVDSSGGALVTVA
Ga0256362_1056305	Ga0256362_10563051	F023359	VIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAALVLVSSVIAFLSFLGLPQAFKDEIPNCVDGPCREFSNSIKLSDLIEVQGANTYSLVNTRTWGPVEGWFIVLGIIPVSVVLLALVVLNKFPLPIDSEASSGEAL
Ga0256362_1057776	Ga0256362_10577761	F001904	YTKMMKAVFLAVLALLALSAVAVSAQTDFEIAALEVAGDCHPECRWQCDDPVCPAQCHPVCERPKCQIHCEETECAKCKIHCDKPQCNVRCPKDLCEKNDCPKCETVCAPANCRTQCEAPNAVCTPMCEATKCDWKCKKPVTCPKPKCELVCERPKCAAKKRAAGPSFIETASTDKAENPTCCPCSVQANVAAAMQQAS
Ga0256362_1061528	Ga0256362_10615281	F023359	LTVLLTLFQLDRVRNWFIFSIGMSFTRIAITILAALVLASSIIALLSFLGLPSGFKDEIPNCVDGPCREFSSSIKLPDLIEIQNSQKYTLMNTRSWGPVEGWFIVLGIIPVSVVLLALVVLNKFPLPIDSEASSGEAL
Ga0256362_1062888	Ga0256362_10628881	F059663	ITALLLSGILSVYFVLVFFAGFRAKVVYSWGATGARRIAMLVSLFVVISVVIAFLATTGITNALKTDNPLCVDGPCNKFVDSQTTSLGTYTYNDIVYNMNQSMTWGPAAGWYLFLACIPLSLLLTIVAGLNNYPVPIDSLGSGEAL
Ga0256362_1064751	Ga0256362_10647512	F061789	YVMARGYKILEKLVFEISWCDLNIADAHAELGDGQAAITWGQRANDIGTLRKDNEMICKSKYVMARGYKILEKYQDAENLLLAAGDLVAKSNDWPQITKIERELIAIYRLTERDAEADEAERRIATLTEIVN
Ga0256362_1064908	Ga0256362_10649081	F026607	MMKKFVSTTVALALALSASVALAGTYVTGPLPSEFGGGFIPSNPAVLKNVQKASKEGAKLAASVEKCYSKGAANYSKGKATGVSTCLNDPAKGVLPKYVAKVQGIAAKAPGLPACAGTPGGNGATIATLVKGFNSLVYCQSPSGAFLDGASSF
Ga0256362_1064935	Ga0256362_10649351	F058592	VLLQVPSALRKYVVVEAGATVTLLPVPNDVPPQLPLYHLQLAPAPRLPPVVLSVVLLPLHMVVVPLIDVAGTEVS
Ga0256362_1066314	Ga0256362_10663142	F058592	TLLPVPTEDPPQLPLYHFQLAPVPRLPPLTLNVVFLPRQIVVVPLIEVAGTEVS
Ga0256362_1067642	Ga0256362_10676421	F095369	VAHIVRDGEIVPIPIPLNQRVKIGRHYQPPQLNYLANDQLWIQDVYTFKQIPWYMIKNRFERYLLYATLYRAIVVMLTMIGRYWLGAPH
Ga0256362_1068158	Ga0256362_10681581	F032522	HLLIFLALLFCVAGAMRMPPWINETTICANGDCTQRNSLYERIADIQPGYQWNDAGGYCGSWATQRAVLAKGAWISQQQVRDHTRNCGGHDSEILSCNIDEAWTNLKIDYEAFAYDKLPVPQTDAFASWLKKQLVQGHVVAWMIMWNGQTYPIYDLTPPSGMYGHVEPVIGIQSNHPLNDSTVY
Ga0256362_1068745	Ga0256362_10687451	F064751	MVIAEVPDTAPAVVRTMVVLVAVAAGVEVAVKDVTVLAMEDTVPKK
Ga0256362_1068745	Ga0256362_10687453	F064751	VIAEVPDTAPAVVRTMVVLVAVAAGVEVAVKDVTVLAMEDTVPKK
Ga0256362_1069183	Ga0256362_10691831	F087401	ALAALVGFGVGVNPAQARITTEESASILVFPKVIANGVRDTIIQITNTSNNMRHAHCFYVNAAPTLEGQPISEDNPPLWTEIDFDITLTKQQPTKWVVSTGRRFPAFEDTCAGMANDPGRNCDNTTTGGGDADCCDAGFDPGRVPPTPPDFTGELKCVEVDASGFPVGGNALKGEATIVDPA
Ga0256362_1071891	Ga0256362_10718911	F102558	LVLKRLFEGKGTRSQAVDAVTSSGLEGLEQRTLVAAALLLFEEGGGVAACMSDRREGSDESAAVGSAIVSEDDLQCCQNALSIFGEQSIDEVFTDDAEDFTVNVACVARAVQEAAVFSQLRAKLLKPFQGADKMYEVVLVLKRLFEGKGTRSQAVDAVTSSGLEGLEQRTLVAAALLLF
Ga0256362_1073589	Ga0256362_10735891	F000212	LAGLIYVTMQKCHPQCAWKCDDPKCPAICEPVCEQPKCHTSCAEPRNAVCDVKCEQPHCTIKCPDKGCAALDCPKCVTVCSQPNCVTHCQAPKPECEAVCEEPRCDWKCHKPQCPVPKCELVCENPNCSPQVNCFACNNAAVGVYNGMMFKEAERNP
Ga0256362_1074402	Ga0256362_10744021	F016245	VSPAGASGSVSIGPGLVLTLQLGGGVVFSAGGAVQFWFGGVTNPSANQSQVNDLAAVTVSSTGDVVGGSVTGVLPAIVNGLGTLSVGLSNSVRQGTGIRMTVSFTPADAVPGDGRFIMTLVGAGFACAANTAVTFVSPAGASGSVSIGPGLVLTLQLGGGVVFSAGGAVQFWFGG
Ga0256362_1074789	Ga0256362_10747891	F094929	RRNRLIASHPDSWYDGANWRYGDDGHVRKCTEPSTLSSNEGNCQNIFRMDASGNLIKSAEGNNILLMRKCPWKCNNPGQTGSDACRIDADCLKVTRWATYLPDGTQIEKNLLATTRTQYDNIARDTSYSSLDEEDIYRRGITRNFRGYGPQKTRTPNADSPGLFGSIRDATGNII
Ga0256362_1075209	Ga0256362_10752091	F016245	NPNSNQFHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGALVVGLSNTVRQGTGIVMTVSFTPVDAVPNDGRFVLTLVGAGFACSASTTVTFVSPADGSGYVSISAGLVLTLQLSGGTFSAGQAVEFVFGGVTNPNSNQFHISNIHAATLNAPGNIVGASVTGYLPAIVNGLGA
Ga0256362_1075220	Ga0256362_10752201	F016245	LSTGDVVGGSVTGVLPAIVNGLGPLSVGLSNTVRQGTGIRMTVSFTPVDAVPSNGRLIVTLVGAGFACGANTAVTFLSPAGASGSVSISAGLVLTLQLSGGVFNAGGVVQFWFGGVTNPSSNQSQVNNLEAVTTLSTGDVVGGSVTGVLPAIVNGLGPLSVGLSNTVRQGTGIR
Ga0256362_1075797	Ga0256362_10757971	F032540	KVGVNDRLDVWRQYQNDEDINPRKKKSPKADWEKQRSIPDFVDGIIGPSPTSMDEGGSKSRGSFNVKKITDKTDFYYLRISDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLVTGEEQFFRFRF
Ga0256362_1077047	Ga0256362_10770472	F029333	MTMCVPVGVAAEPVGPPPLICTLGDPALAKKPDGYVSVMLLPAASAPPAVVVKVNVAAADVLLATRSATATPNVT
Ga0256362_1078367	Ga0256362_10783671	F104576	LLEDLERCIDANRQLVYDTDNNYETTEILIDSITTDEGLLAPYAVGEINLQVRYQIM
Ga0256362_1078393	Ga0256362_10783931	F033729	VNDATSPARPVVPVEPIFDRTPHPFGDGPVNPLICDASDHALRQRTVNFAAKRYADMLFVSGLDRETADRHHRWRAALPPA
Ga0256362_1079105	Ga0256362_10791051	F094929	RLIASHPDSWYDGANWRYGDDGHVRKCAEPSTLSSNEGNCQNIYRLDANGNVVKSADGNNILLMRKCPWKCNNPGQTGSDACRIDADCLKVIRWATYLPDGTQIEKNLLATTRTSYDDIARETSASSLDEDDIYRRGITRNFRGYGRPGRVPPGQGHGYGQGYGQGYGQG
Ga0256362_1079908	Ga0256362_10799082	F061852	PVKKDVTADAIGAILRLSENDIESLTKANKSALKAIFDALANSKPL
Ga0256362_1080916	Ga0256362_10809161	F010623	AYLLPSAGLPTWYLDSEDDRFEIVITKGTILSVVADSNGDARIVPANGTSSSVTWGDTMPSTWDPLNGATPSYSSGATDTVTVAAYSVPIGCAQYDLYRPFDKGTSQGAGFITHGYVEYPMVDGINADVTVGSVVRADHMGRPVKAAAADFYNASAVYSYLQVGKVVE
Ga0256362_1081774	Ga0256362_10817741	F051067	TLTPMDKFIMRDFVDESYLTNLYQATHWAQQLKMQGQTYCYRHVPQQLGLYSKMYDQNDLIDLTFISYIVPNPYTYDFSIPFNVNGHIIYVDEVDKSFIIARKGREFYESLYAALEMAKEFRANGRYYCYNMVTPNWFLPENQYAAGIPGQKLILLWYNMNYVIKNP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300028096: Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences