Sample 3300026410

3300026410: Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300026410 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133460 \| Gp0294614 \| Ga0256325
Sample Name	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	100606713
Sequencing Scaffolds	56
Novel Protein Genes	68
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	40
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater → Freshwater Microbial Communities Amended With Dissolved Organic Matter (Dom) From Various Rivers In The United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: New York
Coordinates	Lat. (^o)	45.0061	Long. (^o)	-74.7949	Alt. (m)	N/A	Depth (m)	5
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000191	Metagenome / Metatranscriptome	1666	Y
F007472	Metagenome / Metatranscriptome	350	N
F007964	Metagenome / Metatranscriptome	341	Y
F009078	Metagenome / Metatranscriptome	323	Y
F010249	Metagenome / Metatranscriptome	306	Y
F016245	Metagenome / Metatranscriptome	248	N
F016926	Metagenome / Metatranscriptome	243	Y
F019127	Metagenome / Metatranscriptome	231	Y
F020340	Metagenome / Metatranscriptome	224	Y
F023359	Metagenome / Metatranscriptome	210	N
F023532	Metagenome / Metatranscriptome	209	N
F023855	Metagenome / Metatranscriptome	208	Y
F025267	Metagenome / Metatranscriptome	202	N
F026478	Metagenome / Metatranscriptome	197	Y
F029333	Metagenome / Metatranscriptome	188	Y
F032540	Metagenome / Metatranscriptome	179	N
F036098	Metagenome / Metatranscriptome	170	N
F039008	Metagenome / Metatranscriptome	164	N
F039170	Metagenome / Metatranscriptome	164	Y
F041009	Metagenome / Metatranscriptome	160	Y
F042749	Metagenome / Metatranscriptome	157	N
F043769	Metagenome / Metatranscriptome	155	Y
F043921	Metagenome / Metatranscriptome	155	N
F044151	Metagenome / Metatranscriptome	155	Y
F044315	Metagenome / Metatranscriptome	154	N
F046188	Metagenome / Metatranscriptome	151	N
F047011	Metagenome / Metatranscriptome	150	N
F048272	Metagenome / Metatranscriptome	148	N
F053640	Metagenome / Metatranscriptome	141	Y
F056317	Metagenome / Metatranscriptome	137	N
F057897	Metagenome / Metatranscriptome	135	N
F058712	Metagenome / Metatranscriptome	134	N
F058796	Metagenome / Metatranscriptome	134	N
F059663	Metatranscriptome	133	N
F063363	Metagenome / Metatranscriptome	129	N
F063376	Metagenome / Metatranscriptome	129	Y
F064751	Metagenome / Metatranscriptome	128	Y
F065491	Metagenome / Metatranscriptome	127	N
F071977	Metagenome / Metatranscriptome	121	Y
F078267	Metagenome / Metatranscriptome	116	N
F078620	Metagenome / Metatranscriptome	116	N
F079635	Metagenome / Metatranscriptome	115	N
F082152	Metagenome / Metatranscriptome	113	Y
F083749	Metagenome / Metatranscriptome	112	N
F091401	Metagenome / Metatranscriptome	107	N
F093296	Metagenome / Metatranscriptome	106	N
F097215	Metagenome / Metatranscriptome	104	N
F100333	Metagenome / Metatranscriptome	102	N
F100446	Metagenome / Metatranscriptome	102	N
F100451	Metagenome / Metatranscriptome	102	N
F102558	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0256325_1001605	Not Available	3194	Open in IMG/M
Ga0256325_1006131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1789	Open in IMG/M
Ga0256325_1008703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1527	Open in IMG/M
Ga0256325_1011333	All Organisms → cellular organisms → Eukaryota	1331	Open in IMG/M
Ga0256325_1012857	Not Available	1248	Open in IMG/M
Ga0256325_1013636	Not Available	1209	Open in IMG/M
Ga0256325_1016154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1107	Open in IMG/M
Ga0256325_1016458	Not Available	1095	Open in IMG/M
Ga0256325_1017542	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	1057	Open in IMG/M
Ga0256325_1020519	All Organisms → cellular organisms → Eukaryota	971	Open in IMG/M
Ga0256325_1021732	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	940	Open in IMG/M
Ga0256325_1023447	Not Available	901	Open in IMG/M
Ga0256325_1025412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
Ga0256325_1028323	Not Available	807	Open in IMG/M
Ga0256325_1029494	Not Available	788	Open in IMG/M
Ga0256325_1029498	Not Available	788	Open in IMG/M
Ga0256325_1031765	Not Available	754	Open in IMG/M
Ga0256325_1031788	Not Available	753	Open in IMG/M
Ga0256325_1034473	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	719	Open in IMG/M
Ga0256325_1034806	Not Available	715	Open in IMG/M
Ga0256325_1035724	Not Available	705	Open in IMG/M
Ga0256325_1038925	Not Available	671	Open in IMG/M
Ga0256325_1039607	Not Available	664	Open in IMG/M
Ga0256325_1042903	Not Available	635	Open in IMG/M
Ga0256325_1044767	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	620	Open in IMG/M
Ga0256325_1047648	Not Available	599	Open in IMG/M
Ga0256325_1047696	Not Available	599	Open in IMG/M
Ga0256325_1047734	Not Available	598	Open in IMG/M
Ga0256325_1047737	Not Available	598	Open in IMG/M
Ga0256325_1049450	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	586	Open in IMG/M
Ga0256325_1049910	Not Available	583	Open in IMG/M
Ga0256325_1050189	Not Available	581	Open in IMG/M
Ga0256325_1051819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	570	Open in IMG/M
Ga0256325_1053314	Not Available	561	Open in IMG/M
Ga0256325_1053708	Not Available	559	Open in IMG/M
Ga0256325_1054869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
Ga0256325_1058438	Not Available	533	Open in IMG/M
Ga0256325_1058679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	532	Open in IMG/M
Ga0256325_1059173	All Organisms → cellular organisms → Eukaryota	529	Open in IMG/M
Ga0256325_1059938	Not Available	525	Open in IMG/M
Ga0256325_1059943	Not Available	525	Open in IMG/M
Ga0256325_1059989	Not Available	525	Open in IMG/M
Ga0256325_1059990	Not Available	525	Open in IMG/M
Ga0256325_1060185	Not Available	525	Open in IMG/M
Ga0256325_1060727	Not Available	522	Open in IMG/M
Ga0256325_1061230	Not Available	519	Open in IMG/M
Ga0256325_1061247	Not Available	519	Open in IMG/M
Ga0256325_1061315	Not Available	519	Open in IMG/M
Ga0256325_1061417	Not Available	519	Open in IMG/M
Ga0256325_1062032	Not Available	516	Open in IMG/M
Ga0256325_1062620	Not Available	513	Open in IMG/M
Ga0256325_1063786	Not Available	508	Open in IMG/M
Ga0256325_1064568	Not Available	505	Open in IMG/M
Ga0256325_1064671	Not Available	504	Open in IMG/M
Ga0256325_1064757	Not Available	504	Open in IMG/M
Ga0256325_1065594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0256325_1001605	Ga0256325_10016051	F056317	LCIELADFKSLAIPVRMELLSGFRQQQSQPPPSAAVAAPKTTSPPAESSALTADSELEIISRLPQGKQLDILTKAPSFKLLAETLRGAKFERLRCDFPKREIRAEWFRDLPTDQRLALERLYMCVADKRMIKVGDEMTVNYLFKTVFSDEVLDKYEEFIRAAFARGEGLSAITYRKSYFSLVSLITSLSGRHNSNVEPRLLASVMQARRRLLDHADSWNKETTLASNLSESDKILRTMNSTPPEVVMKMLYFLLETQKIWFNLNFSKRHVQEHEVQRALGFVQFALLVARPVSRAETLVNVTLATVTKQLRQPGQLCWTFEVIPVCLCS
Ga0256325_1006131	Ga0256325_10061311	F063363	SDRHERNRSNPDGLMRMNLISMHSASITLGKDLQGQSIYLRWFLQEHPLERQCLLNMYPVSRRWLVRMLLSTRWISLLETEINVAAALTGINSQDRSNTLKSISDAYLRRPIPSGFPRWVLRILNADPLLLGK
Ga0256325_1008703	Ga0256325_10087032	F048272	MNVLKGRISNCLSLVTVILLLPASVAWAAEDKSSNAAKPSIAAKPLVPSNSGEQNSPPSERVLLVRASAVPLGDNSVMAVSPQEAQRELLVIESGLFRRSLAGPKVLSVPEQGGWVRGLFKEPKASKLWSLFNPKAPLDSETDLMRSARIFGVRGDAPLPHSMQDPIGVEPVGIRFWQIS
Ga0256325_1011333	Ga0256325_10113331	F007472	IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKVEFSYTRIAASDSSLASSLYNYTQTTFDMFGQTVNTQVANTKIVKTSQQTYAQLGASSVNQQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLVVVASEIIAFLAFLGISDKISSDSPNCLSGPCQKFADTVTTQLGQSTLAIGNEAVTVSLQQVANWGPTAEERQQLPIRSRWQEWTGRAEWSLSQRTSGKGR
Ga0256325_1011333	Ga0256325_10113332	F007472	AAVGIQIGKMVYFTYKKLNICTVALLATVFAVLIAAMSVNWYQYKVEFSYTRVTASDSSLASSLYNYTETTFDMYGQTVNTQGANTKIVRTVQQTYAQLGASNVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFVGITALRTILVIALLVVVASEIIAFLAFLGLSDKIASDSPNCLSGPCQKFADSVTTQLGQSTLAIGSESAAAVSLQQWGPSWRPAAGRQ
Ga0256325_1012857	Ga0256325_10128573	F078267	DRSKTLEKEYVQKLISFHENQSNVAAEMSAFASSFDASFNELLSTREVAYAQMLNEAVETKLSRLYEVEKRSLSIFQDLLVEGMTETLHNMAEEEDSEESDLDQLEIILDTPSEMTDYEIVENAGGYEGSDAVWNAEYDMSEEIEY
Ga0256325_1013636	Ga0256325_10136361	F079635	KVTMAGTDPYYIDTDPEEAEGVVRPGYVRVMCWQNSACLQIREDVINQSQLMNFLASARPAENLSECIHLQNQLASADNVRLICDWLAKHIEFQSRDAPAEERRAFDQRFFLLNPAGHAAYDSAPNDQAKSDILDSRKDWLRWREDNEENEDPKRLSVDPSNKRTPKFQRTGPVEARLHRTYEEIQHVMFVANFLELHPTDWHVEFAKKEAERIAAQPPGPFQEYGLDPADKFAETVMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVTADLWIHGDDFVEKVVPELQAQQRAEFAKAKAEGMSDPDIEAKFGKPIPDWTLESTQDERAFMKEVPGQEANPTLRVPAIKINDQQPADEGFEIGHHWWG
Ga0256325_1013832	Ga0256325_10138321	F039170	RGAPGARGATGAPGAKGGDADLSLIDVCGVSGGDDSSCSRNPGQGFAYSVGDPHYRTWDNAHFDIQPHTYWGEIVLVQHKRMGGGDIEVQTATVPWFHNSWSESQHHHGGPKGNTGLAIAAWGNVIVFYARNHLGSYFLNGKQVTWHNHGWTTIAQGIQCAKSGHHFNFLIDKGTGYLRIWGNMHGSNNMDIYGHASGSWATGKSLTGAWADWNGDAGNDQAIINQLNAQGKLSVLNTPRSYFSNKAPRSSTNGQFMLAFDMELDESQSRIIPGETITMDIQEPAKQCPDKAAIIAQNCKGVFGGALKDCGADICLGVTPAEAGKDAHKGQVDNKNIKLLPQTNAEQKGDTCMLLDQLKQVKKLPLTGGKSFSFSTFIKQEGERLQGTIARKGTEWALES
Ga0256325_1016154	Ga0256325_10161542	F025267	MELTIKPLELGGGYKYRMLDMLCAEALEIGIVRMLLKRQQLSSTGYGVSASLNATFFALVLARFEPLLIFFAEKQ
Ga0256325_1016458	Ga0256325_10164581	F079635	AAENTNPYYVDTHDEDATDVCRPGYVRVMCWQKSACLQIREDIINQSQVMNFLAGARPADNLSECIHMANQLATADVLKVICEWLAKHIEFAQRDEAPAVRRAFDQSFFLLNAAGHAALAAAANDQAKADILDSRKDWLRWRQDDPENEDPKRPSHGGARTPAFQRTGPVEERLHRTYEEIQHIMFVANFLELHPTDWHKTFAIQENERLASQPPGPFQEYGLDPADKFAETVMELCCHHLGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIVVADLWIHGDEHLKSIVPELQAQQREEFAQAQAAGMSQADIDQKFGKPIADWTVESTQEERAFMREVPNQEDNPQLIVPPIKITDAQQAD
Ga0256325_1016495	Ga0256325_10164951	F000191	GYTVGNLVNQHVRFIESGEKDPLMTYEKALITQSRALEIPEFD
Ga0256325_1017542	Ga0256325_10175421	F026478	SVLLIAVVLSLLLVAQCSKPKRKAVALDDEEVVQAKDFALKEIIKLSDSYRDMKIVKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0256325_1019593	Ga0256325_10195931	F100446	GAWADWNGDAGNDQAIINQLNAQGKLSVLGTPRSYFKNKTPRTSTNGQFMLAFDMELDESQTRVIPGESITMDIQEPTKQCPDKAAIIAQSCKGVFGGALKDCGADICLGVTPAEAGRDAHKGQVEKELIKLLPQTNDQQKGDTCMLLDQLKQVPKLPRTGGKSFSFSTFIKQEGERLQGTIARKGDEWSLESNNDGDVIFTSNGVSCKALKVIGRQYKNVVAVSSATDKTIKILVDGKEVCTKAVAGTFAEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGFFSKEKPECIGA
Ga0256325_1020519	Ga0256325_10205191	F007472	MVYFTYKKLNICTVALLATVFAVLIAAMAVDWYQFKVEYSYTRISSTDSSLSSSLYNYTQTNFDMYGQTVQTQAANTKIVRTTQNTYAQLGASNVNQQFKIQQAFVLIALLVAGLLFVAHTLYFFDAFRNKILFFVGITALRTLLIIALLVVIASEVIAFLAFLGLSDKIASDNANCLSGPCQKFSDTVTTQLGQQNIAIGTEASVAVTLQYITRWGPTAGWFLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256325_1021732	Ga0256325_10217321	F042749	ESSCCSSAQSRFTLSCCFSQSFGEMIGSTWMKVIALPCLLLVAMVAVMYFEPSEPSIHHKGEVALQESAQHVQSLALFKHAAIEDVYVYAGKEEHTRHLVPFICRLIKRHRFRLNIHQFFSVDDAPLRSVLWSHDSRVVIFPPFESYPQISSKGFTDLRAYVAAGNNIVFMGSYIALQVMNDAFGFSLRDDYKEGPYYRNDRNVRGTEFEYLPSRLNEPSPRVYGAMAKSLPPGAFSLYDSLGSVVVFYVRYDLGTIVYIGYQFDNPYQIDSWVRVIHAAMAM
Ga0256325_1023447	Ga0256325_10234472	F009078	MVRLDKPAQVREDPFTDKTGGGNNDAGCCGKNVCLPARKGNRSRWKVTGGADFTTKPVQLIGMRKGSVWVRGVATKGSYAG
Ga0256325_1023486	Ga0256325_10234861	F000191	TVGNLVNQHVRFIETGEKDPLMTYEKALITQSRAGEIPLID
Ga0256325_1025412	Ga0256325_10254121	F046188	IKVIEGVLIHPIGATPPMAFETIATEEILYEVRTWSLIGNAYAATSVLFVSDFKI
Ga0256325_1028323	Ga0256325_10283231	F029333	MTIWVLVGVATVPVGGPVPLICTPGVPVLEKKPVGYVSVMVLLVASAPPAVVVNENVAAADALPAKRSDAAIANDVLVT
Ga0256325_1029494	Ga0256325_10294941	F044315	MAGALLSLAVCGLLMFVNISSSQPVDLLQQTCPGCLAKIAKKINALSADQKHMAQQFESEIDHLQQSVSQLKAEVTHVNPRRGLTKLVVAPVGASEASNAVNTKLTHDPEFDESGFKKGANRARNMRDKKYGAFPNRWVDKDTVEAFADHIYGPNPTTLDRKGVEREGYFTMAKIHSGMFYYINLEGVSNHHIKLIMQGTDGYNREYEGYGSIYTGPIYDGDHGVRDYFEVQDL
Ga0256325_1029498	Ga0256325_10294983	F097215	GRYALGGFLPRRPDVRVEKNSDGSVTLHPVKRRMSRTEVEAFVSSRAGTWEGPVSGEKLLKLTRGA
Ga0256325_1031168	Ga0256325_10311681	F063376	NDAGGYCGSWATQRAVLAKGAWISQQQVRDHTRNCGGHDSEILSCNIDEAWTNLKIDYEAFAYGSQPIPQTDAFASWLKKQLVEGHVVAWMIMWNGQSYPIYDLKPPAGMYGHIEPVIGIQSNHPLNDSTVYDDDVALHFTDGGTSTVHRTISTLPCKWAGLGQQADCGEFEYGVGNPYGFGWAAKGFAEDSKPYVPASLKIQPYLYEPDTRSGKKPEQLKGTLTATELTPGSTYDIYRWDSVEEALTYTDNY
Ga0256325_1031765	Ga0256325_10317651	F065491	GVRIVVYLSPSMYLASGQYRFVYKHCCRNPLVMNMPTLAPAFPFVIGTDYNKVPFMPPSTPSNTPLFTSPVPFNLLEDTVQLLSFGSYLTEPDGDSLVVEVDSILIDHGTSGFVAASMATALSAWGPYLVGPSTLNVLWRPDSSGLYAAGWRIKEFRNGQVIGIQRVQHHFRVVKSFATSLIDLGRDEISTWDPESHGDYYNLNGQLIFSGVWGKDRRYDGVLLIRQGSRFWKKAWLP
Ga0256325_1031788	Ga0256325_10317881	F044151	WALYFLEPMLLEPGLGTSSGERDHLASDEPNASLTLPT
Ga0256325_1034292	Ga0256325_10342921	F100446	KQCPDKAAIIAQNCKGVFGGALKDCGADICLGVNAAAAGKEAHKGQVETKLIKLLPQTNAEQKGDTCMLLDQLKQVNKLPRTGGKSFSFSTFIKQEGERLQGTIARKGTEWALESNDDGDVIFTSNGVSCKAPKVIGRTYKNIVAVSSATEQKIKIVVDGKEACSVAGKLFTEPLDAPLNLGSISDHIQAKVAKPTYIASGVRSNEIGLFSKEKPECIGA
Ga0256325_1034473	Ga0256325_10344731	F026478	GSTFAMARAVLLIAVVLSLLLVAQCSKPKRKAVALDDEEVVQAKDFALKEIIKLSDSYRDMKIAKLISAEKARSAFSDGTNFFLKMELSCVSKCEAPLSPASTCRRGKYKGTNEIIVFWKDDGHYDGIAIDEFPQMDGEFHPCTPSYKGSEKCNPAEHRTPEQAALFMDDPEDDSVPRKEDL
Ga0256325_1034806	Ga0256325_10348061	F058712	YLAYLGIFLAAICVAGLVFLIVSREPTLSLVKRYAGMQASGVNQASSALLVLCIAFLLNDVGQIRQKASDTLLLEADILRTMGRVAVNLPRDVGEPLQNLLVAYSDAVLNEDWPRMQNGTRDQNNSSAGSLAKIIGISDFVYSNLYQFGHPQIGQQMLSSVQKLREYRLQRIEVSLKHPTIEKVALGLFFCLNAILVLMLTHADRPRPLFAATFLFTWLSLSALHTSLILQRIEVSLK
Ga0256325_1035724	Ga0256325_10357241	F091401	QTVNVQVANTKIVRTSQQTYAQLGASGVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTILIIALLVVVVAETIAFLAFLGISDKIAKDSPNCLNGPCQKFADTVTTQLGLSDLAISGGNVAVSLQQVATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL
Ga0256325_1038925	Ga0256325_10389252	F043921	MKSLFIMSVLLVLTGCGTLGGAMQGAGQDLNQAGQYVKNVGK
Ga0256325_1039607	Ga0256325_10396071	F041009	KLQALTFDADPQSAIIMESPEEAGRSRIPDFEASGIYIQPTFDMAFDFYLPRVGQFQQISALQFQCERAKSTAKDFWMPWFEFIFTSGDKFAQGEKSTNRLAVTKSLPLSSEEYMIRIELSSNKDKGYTITAIKTNKKLYNFKCGATSIALDVPPRSKDLIIGFAGNVQSGADGTYFTNLQALHLKLNAFADEVDEVQVNQ
Ga0256325_1042903	Ga0256325_10429031	F016926	ARNYVDKYNQFGNNPSQWTHETGNSNYWVLPAGSVWQCKGDPNGPYGLVAGAREFANCVRGVQDWSDLWSKLNSNSHSMDFDDWRTICDCWGDTLDDPTFSSPDKRHFADCFLDAVGGCGDGSAAARQRLENQERAFLGIVLRTMGQADATNPTVLTTRTTLLINLLATPAPVDVPGKSCRYTEPSCVTPAPVQPMCPCETYAISCTNTPC
Ga0256325_1044767	Ga0256325_10447671	F023359	YDSNSGGMVKGYFKTSQAFVVIVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITLLAGLVLLSAVIAFLSFLGLPSAFKEEIPNCVDGPCREFSNSLKSPDLIEVQNGVSYTLVNTRAWGPVEGWFIILGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL
Ga0256325_1047648	Ga0256325_10476481	F057897	SKRSQGVARRVVARLLNQRVSACFHSWADAVGCARQERTAAAQRAAEQDARKLLLQQCRKGIVQHLMQVCTIRRRRLLVQKAVESWKRAVSQTREGAAVCRRVLGRLLQRSVGAAFEGWREHGAEQKRQRAVVMRVAARVTRLRNRWVVVCFKCWQHRLAAMRHCSEIVATGVKRVAHDMARDHLMAWVEAAKESKRSQ
Ga0256325_1047696	Ga0256325_10476961	F039170	AHFDIQPGTYWGEIVLVQHKRFGGGDIEVQTATVPWGHNSWSESTHGTGYPKGNTALAIAAFGNVFVFYARNHFGSYFLNGHQHTWHNHGWRTMMTGVNVYKVGGHFNIIINNGRGQIQIWGYQHGGNNMDIYGHASPSYATGKSLAGAWGDWDGNAGNDQHHVNQLNAQGKLSVLGTPRSYFKDKTPRTDASGQFLLA
Ga0256325_1047734	Ga0256325_10477341	F100451	EDPKRGKYGGQRTPGFNRGGAAVQDRRHRTYEEVQHIMFVANFLELHPTDWHRTFAQSENERIAAQPPGPFQEYGLDPADKFAETVMEICCHILGDMILGCESPVDMQHRFPTLIGAKALTAKDRYDIATADLWIHGDDFLFEIVPELQEMQRQEFAAAQAEGMSAQDIETKYGKPIPDWTYESTQEERAFMKEVPQKE
Ga0256325_1047737	Ga0256325_10477371	F053640	EQSKRSGLKDVAESTAGIIPGDRGMVGDSWCRPPLQMAQAVERHISPVPLAGVVSGQFTHESGTVRQGAIRNRVEPSQAHGKFRPVRRRSYPRGFRLLLRRPERSHDFRRANPAKRPRSQHEGGAQGSRDSGERADLAKSVKPPQRSGVTNHVAPLQKRKQP
Ga0256325_1049450	Ga0256325_10494501	F032540	LGLATGADQLGGRSLRKRIVVAVVMLAFGCAAIALAAASASGDSKLRDTSVLKVGVSDRLDVWRQYQNDEDINPRKKKTEKADWEKQRSIPDFVDGIIGPSPTAMDEGGSKSRGSFNVKKITDKTDFYYLRISDRSGNGDRIRAELVGSDGYRLDWVGFGEIFTGPIHEGNLGETDYLRVEDLITGEEQFFRFRF
Ga0256325_1049910	Ga0256325_10499102	F083749	MHDATEIWLVAGLPHAVGHGAAWEYWHEKVEQTFTGQGCDRGWHEAQPGLFSAAVAIVAMPSMTEDCMQVCVIVCTPLVGAPGAEHVREHEPQLPGLQEKLMHGPDDGHGSEVVRQVVWPGARP
Ga0256325_1050189	Ga0256325_10501891	F059663	FFAGFRAKIVYSWGATGARRIAMLTSLFVVISVVIAFLATTGITQALKTDNPICTDGPCNKFVDSQTTSLGTYTHLNVVYNMNQNMTWGPAAGWFLFLACIPLSLLLTIVAGLNNYPVPIDSIGSGEAL
Ga0256325_1051819	Ga0256325_10518191	F007964	MANAFVSTASDNLGGTAGSAGLVQKAYDRLLEFALRSEPLIRS
Ga0256325_1053314	Ga0256325_10533141	F010249	QNIQNEAKQIAEQLADRQISGMKAKYNEFQKWMSIENNPVVSERYNGDQVVNEYDSAHKYVYMTMFKRYNHELQGYYLPTHYPSDYKGQREMSYSKDLLYVVYELQLQIRNNWESAYREDFVAQNMVKLNRALAKHLNDDMSASDIKVRVGGDGAEVTAIVDDKLFRTFGTLCGGYVQCLHYRYRS
Ga0256325_1053708	Ga0256325_10537081	F039008	VNVPTPVYVPITQAPTMGFVPVTYGCVQAGTTACTAPSNCGAGTLTVTSRCVSSTGQDMSMSPQLCPGSCAAQTQTCQLAACPVVAAQPQFVPGVLNTNACPVGTSRILDEATCRAAAIARGAQFVKVETEAQYPVGCQTFQQPNQGLQVFLNLHPTGASDANSAPLCRTGVRRSQHSAPELPQGP
Ga0256325_1054869	Ga0256325_10548691	F019127	RRAEMTNTPKPNQAIITSRYWLVLSIVSGVVALLPLAVVLVNFAANPSSNPFDESGYGAAIWGLFISVPTGGIIFAVGALGAVAIEWIAALQRNRSR
Ga0256325_1057586	Ga0256325_10575861	F102558	ACVARAVQEAAVFSQLRPKLLKPFQGADKMYEVVLVLKRLYEGQGSRSQAVEAVTSSGLEGLEQRTLVAAALLLFEDGAGVAAGMSDRREGSHGSAAVGCAIVSEDDLQCCQNALSIFGDQSIEEVFTDDAEDFTVNVACVARAVQEAAVFSQLRPKLLKPFQGADKMYEVVLVLKRL
Ga0256325_1058157	Ga0256325_10581571	F102558	EDFTVNVACVARAVQEADVFSQLRPKLLKPFRGADKMYEVVVALKRLFEGQGSRSQAVDAVTSSGLEGLEQRTLVAAALLLFEEGAGVHAATSDRCEGTNVNAAGSAIVSEDDLQCCQNAMSIFGDQSIEEVFTDDAEDFTVNVACVARAVQEADVFSQLRPKLLKPFRGADKMYEV
Ga0256325_1058438	Ga0256325_10584381	F023855	VIQYDGNLKTERYGEVRVVSLSSFIKLYQEFSTEGVQKYGSRDVTESSLVSSRSKDGLAG
Ga0256325_1058679	Ga0256325_10586791	F047011	ISEAKPKLGALVKQASAGKTIYLLNGKDMVALVPARPTHDLEPNLDVPAVNRRLAASERTPSAPWKRGDAARLAKQVLQAKPGR
Ga0256325_1059173	Ga0256325_10591731	F100333	IQLGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYSYKIEFSYTRVAASDTSLASTLYNYTQTTFDMFGQTVNVQVANTKIVRTSQQTYAQLGASGVNEQFKIQQAFVLIALLTAGLLFVAHTLYFFDGFRNKILFFIGITALRTVLIIALLVVVVAETIAFLAFLGISDKIA
Ga0256325_1059938	Ga0256325_10599382	F029333	DWVAMVMTIWVPVGVATVPVGGPLPLICTPGVPVLEKKLDGYVSVMVPPVASAPPAVVVNENVAAAELLPATRSDVAIANEGLVT
Ga0256325_1059943	Ga0256325_10599431	F016245	GGLVQFWFGGVTNPAMNQSQVHDLAAVTTTSSGGVIGGSVTGQLPAIVNGLGNLSVGLSNTVRQGTGIRMTVSFTPVDAFPSDGRFIITLVGAGFACSADTAVTFVSPAGGSGSVSISAGLVLTLQLSGGAFSAGGLVQFWFGGVTNPAMNQSQVHDLAAVTTTSSGGVIGGSVT
Ga0256325_1059989	Ga0256325_10599891	F016245	AVQFWFGGVTNPSSDQAQVSDLAAVTTSSTGVVVGGSVTGVLPAIVKGLGTLSVGLSNTVRQGTGIRMTVSFTPVDAVPSDGRLVVTLVGAGFACGANTAVTFVSPAGASGSVSISAELVLTLQLSGGVFSAGGAVQFWFGGVTNPSSDQAQVSDLAAVTTSSTGVVVGGSVTG
Ga0256325_1059990	Ga0256325_10599901	F016245	AVAFWFGGVTNPASIQSQINNIAAVTTTSAGVVIGGSVTGVLPAIVDGLGELRVDPSNPVRQGTGIRLTVSFTPVDAVPSNGRLILTLVGAGFACGPNTAVTFVSPAGGSGTVNISAGLVLTLQLSGGIFSAGVAVAFWFGGVTNPASIQSQINNIAAVTTTSAGVVIGGSVTG
Ga0256325_1060185	Ga0256325_10601851	F023532	VDDVPVNPTVMVEEAETRLLANETEADDKAPANMAGTDTLATVSTGAKPGVAPYVDIVEVVAAAAALGIVRAEMTHTMTPFKAVAVPRASFTLGEEYVAVIVPDEMAVPPLLHVAVGLLPPKEVKPDIVITSATVDDVPVNPTVMVEEAETRLLANETEADDKAPANMAGTDTL
Ga0256325_1060334	Ga0256325_10603341	F058796	APDATHEVEGGLLVTTEGGFVTEIVEPEVEIEIEAEEFATVSAFNDVVSKLESAIAELSAKVESLTASNIKHKEAMSKAIDLIEKVADLPSEEPLKAPVSTKKNDRFEALKKFKNSINK
Ga0256325_1060727	Ga0256325_10607271	F023532	VEMRLLENATEVEVKAPANMAGTATPATVSTGANPELTPNVDMVEVVAAAAALGVVRPETTHTTAAFKATGLARTSLTLGEVYVTVIVPEMAVPALVHVAVGLLLVKEVKPVKVITSAGVDDAPVNPRVMVEEVEMRLLENATEVEVKAPANMAGTATPATVSTGANPELTPN
Ga0256325_1061230	Ga0256325_10612301	F082152	PLIDTPGVPVLAKKPDGYVSVMLLLVASAPPAVVVNENVAAADALPATRSDAAIANEAFV
Ga0256325_1061247	Ga0256325_10612472	F082152	PLMDAPGVAVAAKKPDGYVSVMVPPVAIAPPAEVVKENVAAAAVLLATRSAGDIEKEVLV
Ga0256325_1061315	Ga0256325_10613151	F036098	QGLAGRVETLQAAVEQSGKESEGLLLASLMKLQEEVDGKIGAVKGEVDVQGKSMLEVLETLSAERKAADDDRKQVQTRLQGVSSDVEAVQAQSAKQAETVSGLLLKVADFEGVKPAVQADMERLQKQMSEEVQGLAGRVETLQAAVEQSGKESEGLLLASLMKLQEEVDGKI
Ga0256325_1061417	Ga0256325_10614171	F023532	RGAKPEPTPNVDMVEVVAAAPALGVVRPETTHTTAAALKATGVPMTSFKLGEEYVAVIVPMSTVALAHVAVRLLPVKEVKPDNVITAADVDDAPVNPRVMVEAVETRLLENATEAEVKAPNMTGTATPAKVSRGAKPEPTPNVDMVEVVAAAPALGVVRPETTHTTAAALKA
Ga0256325_1062032	Ga0256325_10620322	F029333	PVVMTIWVLVGVATAPPTTPLIVAAGDPALAKKPDGYVSVMLLPEASAPPAVVVNDNVAAAEVLPATRSDVAIANEGLIT
Ga0256325_1062620	Ga0256325_10626201	F064751	MVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVT
Ga0256325_1062620	Ga0256325_10626202	F064751	VIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK
Ga0256325_1063786	Ga0256325_10637861	F032540	KMARGSVAVVPELGLATGADQLGGRSLRKRIVVAVVMLAFGCAAVALAAASASTDSKLRDTSVLKVGVSDRLDVWRQYQNDEDINPRKKKTAKADWEKQRSIPDFVDGIIGPSPTAMDEGGSKSRGSFNVKKITDKTDFYYLRITDRSGNGDRIRAELVGSDGYRLDW
Ga0256325_1064568	Ga0256325_10645681	F078620	VLHAASLKNLNSAAAPHDETFMYHGVDCGPIVMFKNRKQWPTPPTKGFTATIDALDNTAQLLSEYQVKEKLPGTGLDEPFEAGADVTGGGTTVAEEAGGSVAPVALV
Ga0256325_1064671	Ga0256325_10646711	F020340	LFLSSGARTFADLGLQGDAGAHFRLRFTYNSLTVESNEFNVKPNHMHVSVHPSDGQYSAGASKADIGAGITVQARDGGNNVLTGADNTNAGSDTVVVTVLEASGSVLDANLLGSKGLFLSSGARTFADLGLQGDAGTHFRLRFSYNSLTVESNEFNVKPHHMHVSVH
Ga0256325_1064757	Ga0256325_10647571	F071977	ASNAVHDFVGGGIKNAVNQVVDFGSGAIVGALKHVNDRVTDLFDPNKSKREYMNSQEYKDKMAAKAIFQTFSTKLGLPSNMPKYLTDSLVQWIIGEMKVTPLRRQPFLTNLNSEDQCVSEKAPDTCNEDDIKCIVLANKCFLDDEGCVRAALEKVPTSALEKYAAANR
Ga0256325_1065594	Ga0256325_10655941	F093296	MSNTFLASLREKRETKTALISSTVERAAEELRDLSEVELANVEALNLEVKKLDERIEQMSDIELRNQKAADLAAKVDANVDTNKETRAGGFTVTREELTYSERTADKFLGDALKAQFANDYEASERIQRHQKEMAVEKRASDSGNFAG
Ga0256325_1065747	Ga0256325_10657471	F043769	EVGNGRDVANTNPMTTRALELSPSKDFKLFYTYDGVYGGEIARTAVPTVTERAVDMTGQSTLAEFIDVTSGGHAVAFDVLNVGPAGRLSVAYNPNLDATQSMSSDRVYGATNYNTGGRNSAAGYSIGYSVTPGPIKVALGYTRIEDTATAASVDPTSKTLGVTYTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026410: Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences