Sample 3300025995

Overview

Basic Information
IMG/M Taxon OID	3300025995 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101400 \| Ga0210079
Sample Name	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	148446111
Sequencing Scaffolds	48
Novel Protein Genes	48
Associated Families	42

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	1
All Organisms → cellular organisms → Bacteria	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiogranum → Thiogranum longum	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium 2141T.STBD.0c.01a	1
Not Available	16
All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	4
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.13147	Long. (^o)	-122.265465	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004052	Metagenome / Metatranscriptome	455	Y
F004928	Metagenome / Metatranscriptome	418	Y
F005564	Metagenome / Metatranscriptome	396	Y
F016664	Metagenome / Metatranscriptome	245	Y
F018371	Metagenome / Metatranscriptome	235	Y
F018541	Metagenome / Metatranscriptome	234	Y
F021303	Metagenome / Metatranscriptome	219	Y
F024001	Metagenome / Metatranscriptome	208	Y
F026568	Metagenome / Metatranscriptome	197	Y
F028081	Metagenome / Metatranscriptome	192	Y
F029273	Metagenome / Metatranscriptome	189	Y
F029354	Metagenome	188	Y
F033045	Metagenome / Metatranscriptome	178	Y
F038247	Metagenome / Metatranscriptome	166	Y
F040632	Metagenome / Metatranscriptome	161	Y
F042909	Metagenome	157	Y
F043477	Metagenome / Metatranscriptome	156	Y
F046383	Metagenome / Metatranscriptome	151	Y
F049002	Metagenome / Metatranscriptome	147	Y
F051143	Metagenome / Metatranscriptome	144	Y
F053932	Metagenome / Metatranscriptome	140	Y
F058158	Metagenome / Metatranscriptome	135	Y
F058543	Metagenome	135	N
F058721	Metagenome / Metatranscriptome	134	Y
F059980	Metagenome / Metatranscriptome	133	Y
F066277	Metagenome	127	Y
F070125	Metagenome / Metatranscriptome	123	N
F070129	Metagenome	123	N
F070131	Metagenome / Metatranscriptome	123	Y
F072360	Metagenome / Metatranscriptome	121	Y
F074892	Metagenome / Metatranscriptome	119	Y
F076231	Metagenome	118	Y
F078220	Metagenome	116	Y
F078730	Metagenome / Metatranscriptome	116	Y
F081352	Metagenome / Metatranscriptome	114	Y
F082775	Metagenome / Metatranscriptome	113	Y
F084255	Metagenome / Metatranscriptome	112	Y
F090406	Metagenome	108	N
F092076	Metagenome / Metatranscriptome	107	Y
F099324	Metagenome / Metatranscriptome	103	Y
F105198	Metagenome / Metatranscriptome	100	Y
F105203	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210079_1000695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	5183	Open in IMG/M
Ga0210079_1002460	All Organisms → cellular organisms → Bacteria	3027	Open in IMG/M
Ga0210079_1002759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2867	Open in IMG/M
Ga0210079_1003463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium	2598	Open in IMG/M
Ga0210079_1005360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiogranum → Thiogranum longum	2104	Open in IMG/M
Ga0210079_1005942	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
Ga0210079_1007756	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
Ga0210079_1008296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium 2141T.STBD.0c.01a	1708	Open in IMG/M
Ga0210079_1008849	Not Available	1658	Open in IMG/M
Ga0210079_1009110	Not Available	1636	Open in IMG/M
Ga0210079_1009348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	1614	Open in IMG/M
Ga0210079_1010342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1535	Open in IMG/M
Ga0210079_1011528	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
Ga0210079_1011896	Not Available	1432	Open in IMG/M
Ga0210079_1012686	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
Ga0210079_1018608	Not Available	1137	Open in IMG/M
Ga0210079_1021142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1062	Open in IMG/M
Ga0210079_1028363	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	911	Open in IMG/M
Ga0210079_1031171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	867	Open in IMG/M
Ga0210079_1033244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	839	Open in IMG/M
Ga0210079_1033422	Not Available	837	Open in IMG/M
Ga0210079_1033916	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
Ga0210079_1035151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
Ga0210079_1040943	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
Ga0210079_1041847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M
Ga0210079_1046395	Not Available	707	Open in IMG/M
Ga0210079_1049020	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	687	Open in IMG/M
Ga0210079_1049707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	682	Open in IMG/M
Ga0210079_1052086	Not Available	666	Open in IMG/M
Ga0210079_1053365	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
Ga0210079_1054761	Not Available	649	Open in IMG/M
Ga0210079_1055687	Not Available	644	Open in IMG/M
Ga0210079_1055797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	643	Open in IMG/M
Ga0210079_1057913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	631	Open in IMG/M
Ga0210079_1058675	Not Available	627	Open in IMG/M
Ga0210079_1062413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	608	Open in IMG/M
Ga0210079_1062668	Not Available	607	Open in IMG/M
Ga0210079_1063025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	605	Open in IMG/M
Ga0210079_1069937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	574	Open in IMG/M
Ga0210079_1073242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Pseudohalioglobus → Pseudohalioglobus sediminis	561	Open in IMG/M
Ga0210079_1073341	Not Available	560	Open in IMG/M
Ga0210079_1074213	Not Available	557	Open in IMG/M
Ga0210079_1074636	Not Available	555	Open in IMG/M
Ga0210079_1082074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis Delta 1 endosymbiont	528	Open in IMG/M
Ga0210079_1084320	Not Available	521	Open in IMG/M
Ga0210079_1088856	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	507	Open in IMG/M
Ga0210079_1090073	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	503	Open in IMG/M
Ga0210079_1090381	Not Available	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210079_1000695	Ga0210079_10006955	F099324	MFKQIIFVIMLGWVLVLSGCAAIDKGEDYRTGYPPRAGYTSTTPHKALVSEACNIEANNLVGDKDFMADDRARRVYFSQCMLRNGYNAAGNYVGIPSK
Ga0210079_1002460	Ga0210079_10024604	F092076	LDGQISIIKLGAMFSHKIDKLQEIIFTQASGTPTTVTMMDHIQNVMNDPDFDAKYNSIIVLEEHTHIAGVPTEKIETIRRVLDGYAQQRTGRNWAVVAPNERLEAFVKLNLELISPVIFNIRIFRSEEDALNWIKSR
Ga0210079_1002759	Ga0210079_10027592	F018371	MDYSNIIHPKRLTNMQEMEVHVNGPDGANRLFMYSGMAEVELCGGLPHPRWSLEVVCFDIGRSYDLENEAVIKILANAALAGNRTDGVASFAGWQIFGAAGELDHEDCRVRMNIAAGARDTQAFLEQISFHVNVLARVKE
Ga0210079_1003463	Ga0210079_10034633	F099324	MFRLIIFVIMLGWVLVLSGCTAIDKGHNIEGEDYRSGSPPRGGYTRTTPNKALVSEACNIEANNLSAEDFMGDDRARRVYFSQCMLRNGYDADGNYVGIPPK
Ga0210079_1005360	Ga0210079_10053602	F004928	MEQAIHSIHSEPAHTVEIVVHISEGLDELQRGNLVAALNNNAGIVAAEFCPLRYHLMLVRYDKDLYSSQDVLDHVKSQNVTARLIGPI
Ga0210079_1005942	Ga0210079_10059421	F005564	MTESEMNKIFIALMIIFFVGDPGMETLSWLGDIKNYVVAGAFALCSMPFIISQLDG
Ga0210079_1007756	Ga0210079_10077563	F033045	ALLWVIKHTVSPAGIQVLVSLAVFRKMTRIEVVPQHIVIINHPGHYMKISELELPQHLFAETVSTGGAAAELIAPEKLVYWAEQGRGDAVFRLCHTVYERELASINAWESERIQQLEDELMAAGNNEDMSGHKYVNVKHYHTTREDVVREAELKRATVKERLTKHQTAIEELVQEAREFISAHMVQKDEGDMLSYLLAIVVIGAACYALFT
Ga0210079_1008296	Ga0210079_10082961	F021303	GLQADVLHHAAEFVERVYGQAPAEYRRLLGSEGFRAALERGGTFNHGKLYAYAEFSVFRREFTERFPEASPAACINAFSGLLLKNDISIHNLVEFIEGPDDSEQLRLNSPGS
Ga0210079_1008849	Ga0210079_10088492	F105203	MQQAKHAEQMANRFRELVEDAGDSLSANHYNELKLIIEAGLDTALLESLERVTERLTSLAHDIQHNAEFFD
Ga0210079_1009110	Ga0210079_10091102	F005564	MNKIFIALMVIFFLGDPNMETLTWLGDIRNYVVAAAVALCSMPFMVSQLDG
Ga0210079_1009348	Ga0210079_10093482	F040632	MGNSTEHTAAFEIEDLRDPASTQDMVHVVVATREEDLLWAVFDGFCELSTVRVTGCSTLPQTRQICAADPPTYLIIDVGLLEHEPMDLITLANLSDSQCHIVALTNHPVFEIGARFGNARLTFLQKPVSAHDLLLLLRLRIGDGMQRAKVC
Ga0210079_1010342	Ga0210079_10103422	F081352	MIRLIRKILAITFACFLVLNLSAGAAVVVEHCQSPLGSSSAMDMDHCDGMLNFAFPMQGCCGDCNDIFCHLMKNPLQDANAVNASPFQGSYYFFILGTVDSIAESGAWIAASAPRYLFCAAPAWSQIPLYIENLALII
Ga0210079_1011528	Ga0210079_10115281	F058543	METVTISANINEKKKAEFFQTMESLTSLVENQCNDLDIRVKDDNTLIIKITFDGKDQMEKNFYTGEFNILKGTVKSLCEDVRIKITDTAINNN
Ga0210079_1011896	Ga0210079_10118964	F042909	MVEFLTFIGSLNLGTFIVIWTSTIFLVIFISLLLVYVSQMNKETIRLSKNVKILIEELSEKNLKLGDDDL
Ga0210079_1012686	Ga0210079_10126862	F038247	MKSVFFWSEGQARTHRKNNPKPRGIYLNLRQAAILTKPIQSVLFGF
Ga0210079_1018608	Ga0210079_10186081	F070131	MMGKMLTKIGIIGVFAFCFLLQVDLAGGDNRAYGQNKQKSNVPMEIELHFSSTPMLNEYTVLNVEIRALKDAPNTLIEIKIPSDGFELISGSTQHHEDLSSGSTTLYQLGVLPVALGQYKIAASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSGATKIGNFSEPPAEVLPDQKPEEGQEVSYFAAPGKGQIAVRGSWVYQDKAG
Ga0210079_1021142	Ga0210079_10211421	F082775	MSEPDILYPAIFVFSMLLIGLLLTMWEFSRLYKRQQQKEENDKRFTGLDSRVYRENVRNVSHF
Ga0210079_1028363	Ga0210079_10283631	F076231	MMHLKPNKTGAADISEFSGFISTKQNSIISLTKLVVLISVILAVLMVVSR
Ga0210079_1031171	Ga0210079_10311711	F072360	NMLLCGMNRKLKILTVSSRKTLCIVFALLIALSFSAGGVLANSCQGGADCIYCAAAVHPHIPGMDMEMVNQGCQSAEQNSSCGFKSSTSADDFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFRKLISQFEYPDRGELTPIYLLNLSLLC
Ga0210079_1033244	Ga0210079_10332442	F016664	MDQVVHDMPTLNVAKNTVEIVAHISESLDDVQRNNLVVALEQNDGIVSAEFCPLRYHLMLVRYDRDQYSSQDVLSAVGVQKLQARLIGPI
Ga0210079_1033422	Ga0210079_10334222	F042909	VVDFLTFIGSLNLGTFIVIWTSAIFLVIFISLLLFFVRQMNKEAIKINMKVKNLIEAFSEKKLKLGDDDI
Ga0210079_1033916	Ga0210079_10339161	F024001	LRIAFSLNLAMATKGSRKNKFAILGVEAPGRQGAKTQEYLGIPSFRNTAGRDASASKM
Ga0210079_1035151	Ga0210079_10351512	F026568	MHKPSPHKELYDPNYHYTRGVLYFDEERYTFTAYRVPYQELDNKSWKTEKAFTADYRRMIERKYSV
Ga0210079_1040943	Ga0210079_10409433	F058158	MDVTKKDRENRIDKRIVNQKSYMSDITKTEKTDIDIWELHVKERESILAQIAKDRRKSRIRNWIELIFMLGFIYYMLYDIYKDGDLDTIIKFLKYSRYF
Ga0210079_1041847	Ga0210079_10418472	F049002	GVINVFRGETFMAKSNYDKAQTDLMQAIKKGEPCTFEEPIPVLVTLDNGVKYEGVAFEVQPPSDNFPKGLVMVRAGNTDIGVPVSYISGR
Ga0210079_1046395	Ga0210079_10463951	F024001	LVILGVEAPGRQGVKPQEYLDIPKFCNAAGRDASATKMAGYF
Ga0210079_1049020	Ga0210079_10490202	F078220	MFEAVFDVVHGKKRKRLKFAKYMNCGRLNPFRPKSKGTQFTAIRCNNCGGTISFGANGKESRISEHAQIFCENCEDDCTQCPINEQTNKYTFSRKRRIQQKTD
Ga0210079_1049707	Ga0210079_10497072	F105198	MKKLPIALGFMLFAGQAPAYFVWGIGEMSCTQLVSAKIEYDHARDQQTHLAQLNWIKGFITGINWSRDSNIARDLTIETVDEWIDGYCRNNLNDTIATASAALVTHLEGDTD
Ga0210079_1052086	Ga0210079_10520862	F029273	MSHSPEVDALTQHILDEAPKRTSRTVVTRQTKIARATGQLAAVEARKRNDPLYQRMVKYRELYYKYREMLHRKYSPRVRSKARK
Ga0210079_1053365	Ga0210079_10533651	F029354	LSEDPEKRFIKPITNASYPATLAALTLTVYRVAAIGGDPPSLLRLVLLLGATGFLLSSLSFFFYSLYPTKTRLWTST
Ga0210079_1054761	Ga0210079_10547611	F033045	SVKLPEIEGGPQHIVIINHPGPYMKTSELELPSHLYTEEATSPGGAMTRLIAPDKLISWAEEGHGDAIARLCHTVYERKLASIDAWERDRILQLEDEWMAAGNDEDMSGCKYVNVKHYHTTREDVARVAEEKRASIKERMTEHQTAIEELVQEAREFISACVAQQDEGDMLAYLFGIIIIVAAGYALFN
Ga0210079_1055687	Ga0210079_10556871	F051143	MHKPTHQEELKRVETMSTLEAVAYANRLSNRLKYDDCTHEERMNGLELLTLLSERVPFLKITLEPSTFCRLGWNYFSESCG
Ga0210079_1055797	Ga0210079_10557971	F043477	NRECVIALESLERLTSGAQPTSAAEIRRLQETVALNCSTNPAQRREQEEMAARLRVANGPECAEARNRLADMLGRDAAFTREQVRAQQQFVDEHCTSPVH
Ga0210079_1057913	Ga0210079_10579132	F084255	MESSRRYLLQAEIEYWHEMLRLNKSKVAKNREAEMRDCLKRAVRALNSNGAVEFRIAA
Ga0210079_1058675	Ga0210079_10586752	F066277	RKKFFALISTSLLGAALLGAIPLNFFKSKSNSIKVKINPNAVNREKSGKKNG
Ga0210079_1062413	Ga0210079_10624132	F059980	MEEACKMGFSGGFEQGKPETALPELERFIPANIKRVNPQNKF
Ga0210079_1062668	Ga0210079_10626681	F004052	MRILSALFQLALVTFLSSCDQQHSTSGIDPRLGTGCYDSHRAKLQPGTQYEGIEKLSGNRLTIKIMNGVDVVTLDCGLNPDGTLQGNGN
Ga0210079_1063025	Ga0210079_10630251	F018541	MYSPKMRSFWVDFPLTDEQYAKLDLRWRRRQNFYEVKNEPLPKVRISSFCTFGGEDYKILSLEARGDIDAYHEALKVMEQWIVENLGEY
Ga0210079_1069937	Ga0210079_10699372	F053932	MMNRWLPHVLFPRPGWFILHGVIIILVFLLGYSVKF
Ga0210079_1073242	Ga0210079_10732421	F090406	MKGERKTFWLIIALVGLASCSTTLTSVDEGGGNVYALPPTVVDQMLKDAMSTEISTGTLRRGSTPYPSYLGEVTWGSLDKDTITASARPAKGRKLDGTIVDGYVFEVSRKGTAPATGEPTVKRIFAKLQKDAELT
Ga0210079_1073341	Ga0210079_10733412	F046383	FIPGSALACNPEQDGCLGCNDEELPVCLNQFVQEVCQSFVNPGNCDAPRIYDDVERNVLISTGSHMSHIRSMIRNPRKYQLR
Ga0210079_1074213	Ga0210079_10742132	F074892	AMRSLFAPILLFVCLLSGCAEKGEHVYRTWVGPDRSNMAIVTLRLGDGVKDVTLRERVLPRSEYGTILLVPGVYTLYEHDGASIAITIRPALVTVERARANGELILGHTYTLRAGKSKETGDRALWIEDARSGDVFIDTR
Ga0210079_1074636	Ga0210079_10746362	F070125	VTSADDKRRWTEALHAYRDDSERLFGLVASLANLLDRTLVVETIESVLGVTAVHEDDCVIFDDFAIRFGSDDRVKSVFRTIDGTGSGG
Ga0210079_1082074	Ga0210079_10820741	F059980	MEEACKMGLSGGFEQGKPETALPELKRFIPVNTKRVNPQNKFXCGWEDGIY
Ga0210079_1084320	Ga0210079_10843201	F070129	MQIDLTTEALLCAIKSDVRQRVDDIVDGAEQAAMSLNSEQQVEQLLEVALVRVEEAIAEAARAMAREIHRDWHE
Ga0210079_1088856	Ga0210079_10888561	F028081	MDQEEALQRLQKTRKENEEAYLKAKAFLDGFRARGQLNQKDSEFLFLMEFVIKGFKNHGNDIITAFENQVRLTESFNNLQTKVNAIDEDIRQLRKTIDKMFQ
Ga0210079_1090073	Ga0210079_10900731	F058721	PQCKDKMRLVFQNERFLGYRCLLKPNTHNFRYNIKRKKWEKIIIKTKPIVGYKATPYEILFEDEIAIETH
Ga0210079_1090381	Ga0210079_10903812	F078730	MDYSNIIQPNRLTNMQEMEVNVNGPDGANRLFMYTGMAEVELSGGLPHPRWSLEIICFDI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025995: Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences