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Sample 3300019763
3300019763: Microbial mat bacterial communities from the Broadkill River, Lewes, Delaware, United States - FB_5_MG
Overview
Basic Information
IMG/M Taxon OID 3300019763 Open in IMG/M GOLD Reference Gs0129088 | Gp0217628 | Ga0193962 Sample Name Microbial mat bacterial communities from the Broadkill River, Lewes, Delaware, United States - FB_5_MG Sequencing Status Permanent Draft Sequencing Center DOE Joint Genome Institute (JGI) Published? N Use Policy Open
Dataset Contents
Total Genome Size 316234649 Sequencing Scaffolds 2 Novel Protein Genes 2 Associated Families 1
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix marina 1 All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Microbial Communities From Sediments And Microbial Mats In Various Locations Type Environmental Taxonomy Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater Microbial Mat → Microbial Communities From Sediments And Microbial Mats In Various Locations
Location Information
Location USA: Delaware Coordinates Lat. (o ) 38.7906 Long. (o ) -75.1644 Alt. (m) N/A Depth (m) 0 Location on Map
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Associated Families
Family Category Number of Sequences 3D Structure?
F036294 Metagenome / Metatranscriptome 170 Y
Associated Scaffolds
Scaffold Taxonomy Length IMG/M Link Ga0193962_1049912 All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix marina 1106 Open in IMG/M Ga0193962_1172039 All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 502 Open in IMG/M
