Sample 3300017487

Basic Information
IMG/M Taxon OID	3300017487 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0211969 \| Ga0186257
Sample Name	Metatranscriptome of marine eukaryotic communities from Penn Cove, Washington, USA in F/2 medium with seawater, 15 C, 30 psu salinity and 102 ?mol photons light - Mesodinium pulex SPMC105 (MMETSP0467)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0128947 | Gp0211969 | Ga0186257

Sample Name

Metatranscriptome of marine eukaryotic communities from Penn Cove, Washington, USA in F/2 medium with seawater, 15 C, 30 psu salinity and 102 ?mol photons light - Mesodinium pulex SPMC105 (MMETSP0467)

Sequencing Status

Permanent Draft

Sequencing Center

National Center for Genome Resources

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	64430195
Sequencing Scaffolds	24
Novel Protein Genes	30
Associated Families	27

Dataset Contents

Total Genome Size

64430195

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar	6
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	9
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia australis	1
Not Available	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Sar

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia australis

Not Available

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Ecosystem Assignment (GOLD)

Name

The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Type

Host-Associated

Taxonomy

Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine biome → marine water body → sea water

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	USA: Washington
Coordinates	Lat. (^o)	48.5	Long. (^o)	-122.6	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Location Information

Location

USA: Washington

Coordinates

Lat. (^o)

48.5

Long. (^o)

-122.6

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000020	Metagenome / Metatranscriptome	6197	Y
F000040	Metagenome / Metatranscriptome	3998	Y
F000076	Metatranscriptome	2620	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F001618	Metagenome / Metatranscriptome	662	Y
F001767	Metagenome / Metatranscriptome	638	Y
F010751	Metatranscriptome	299	Y
F010767	Metagenome / Metatranscriptome	299	Y
F011850	Metagenome / Metatranscriptome	286	Y
F012119	Metatranscriptome	283	Y
F015603	Metagenome / Metatranscriptome	253	Y
F016241	Metatranscriptome	248	Y
F018723	Metagenome / Metatranscriptome	233	Y
F021304	Metagenome / Metatranscriptome	219	Y
F024727	Metagenome / Metatranscriptome	204	Y
F033310	Metatranscriptome	177	Y
F045108	Metatranscriptome	153	Y
F047708	Metatranscriptome	149	Y
F048326	Metagenome / Metatranscriptome	148	Y
F052609	Metatranscriptome	142	Y
F054571	Metagenome / Metatranscriptome	139	Y
F060583	Metatranscriptome	132	Y
F062433	Metatranscriptome	130	Y
F064392	Metatranscriptome	128	Y
F074943	Metatranscriptome	119	N
F082720	Metatranscriptome	113	Y
F088217	Metatranscriptome	109	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186257_1006210	All Organisms → cellular organisms → Eukaryota → Sar	1897	Open in IMG/M
Ga0186257_1009858	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1569	Open in IMG/M
Ga0186257_1010090	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1553	Open in IMG/M
Ga0186257_1015481	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1234	Open in IMG/M
Ga0186257_1016511	All Organisms → cellular organisms → Eukaryota → Sar	1186	Open in IMG/M
Ga0186257_1023333	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	913	Open in IMG/M
Ga0186257_1023334	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Pseudo-nitzschia → Pseudo-nitzschia australis	913	Open in IMG/M
Ga0186257_1023646	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	902	Open in IMG/M
Ga0186257_1024145	All Organisms → cellular organisms → Eukaryota → Sar	884	Open in IMG/M
Ga0186257_1024652	Not Available	868	Open in IMG/M
Ga0186257_1025394	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	846	Open in IMG/M
Ga0186257_1027585	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	783	Open in IMG/M
Ga0186257_1028609	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	755	Open in IMG/M
Ga0186257_1028687	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	753	Open in IMG/M
Ga0186257_1030530	All Organisms → cellular organisms → Eukaryota → Sar	706	Open in IMG/M
Ga0186257_1030729	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	701	Open in IMG/M
Ga0186257_1030805	All Organisms → cellular organisms → Eukaryota → Sar	699	Open in IMG/M
Ga0186257_1030974	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	694	Open in IMG/M
Ga0186257_1031322	All Organisms → cellular organisms → Eukaryota → Sar	686	Open in IMG/M
Ga0186257_1035732	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	590	Open in IMG/M
Ga0186257_1035828	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	588	Open in IMG/M
Ga0186257_1036701	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	570	Open in IMG/M
Ga0186257_1038371	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Peridiniales → Endodiniaceae → Brandtodinium → Brandtodinium nutricula	541	Open in IMG/M
Ga0186257_1038647	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	536	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186257_1006210	Ga0186257_10062101	F001767	LAQAILAQESYRLPPFSVASAACFPERARACLRTMALSEPMIPKAAAKHTRASIFYGADQYLEELKKKYEHDHEIASLQALMPDSEDAGATAAASKSEGKVMSIQKNDANRSHKTGRLFPTPNKPDPMPAELAFLFTKITPEQMMYMWNILTLIFVSQCLMVLAYCGALAMFPDHWWTCTLCFGAPFAYICIQNIYIDHDVMHGATFPPYEWQRNITHIFSDFLSLPWEEFVLEHNRHHASTVDLLNQGEFGWDPEEFQYWMLEWTWRHKKYPFPIHPFGLLITGAMLPVIHFCGLNDTGALFALEWYFHFPDAGAGGKCNKEFWRKWFPRRVKHTLTVASLWACIWLLGTWPLGRPLSEGWRFMLTVSCCARVGFSLAWMFITNFTHSHPWNNFLATDPERGWPILHDVMAFVLGGKHRWNEMLFHDLHHAFPNAVGTLSQRGRFHGWKKVHDAAVEVLHRGLWKPNGDEETEMQVKQRNRSMRMKSSMMKK
Ga0186257_1009858	Ga0186257_10098581	F064392	MPSSEALTGKGRADALDEGIPTSITVTGRNKDRENQDLQGVYRRIKGLHHGRPAYRKVGSTTCIRYWSPADRWLIDREGLQESDTCNAYAEKCGGFSHPAQEDIVWCVWEGQHRAHVRDPELLVTSAPPAIQVIGRALGRENWALNGEYRLVGLRQGRVSYQKPDNSRHAIRYWAAGDRWLIDFEGLRDVDVCNAYADAKGSMHPGSVELAWHVWDSARGKHVADSCLQSLVAPACVEVVGREAPKENVSMNGSYHLCGLHAGRPAYMKTDGSSHALRYWPREDRWLLDLEGLRDADICNAYGEADGRCEHPGSLDIAWHIWETSRGKHLTDNSVRTLVAPHFVRVSGRDPSKENATVNGDYYLVRIVEGKAAYKKENSDHVIRYWASEDRWIIDLEAGFDGGDVANAYADAKGAEDPGSAELIWHIWETSRGKHVADEDIVAEGQWLPSADWSKVAGFAKAAAPE
Ga0186257_1010090	Ga0186257_10100901	F045108	RGTLLASRRPLPPLLRRAWRPAAGARGSRTFLRAARRDSKLPAAAGPGMEAPVLEKPNTAIPEELEDIAVAGQDTATPHWSETQELERKAPGLKLEQLEWKDLHSIACVASGVLFLAELVRFVAGEKPTDVECYAAGIIYAVIYASRFEGIRYLDSHFRVTFYATTGWTIYYIAHLMAATNPAIFAHSVYPAGIVFLASTIYFYKHWLERMYRHYVQDRFRPYYVPGLMGLMYFHGLDTVDLFNQWLDPNYWTNVPMMLPDQAWTIQDVRLTGLFMSSMALFMITLHNKGILTGGANTLMTVLFTIFVPAFFLTGTHMSLQASFP
Ga0186257_1015481	Ga0186257_10154811	F088217	SLCRCICGSGGRGGGFDIDGRVLGDLDVLEEASDARPQSLPDAGLLSYRVLADQPLRGVPIREGELWYLSAEESIDPVTLSLYINGFSLALAAHEVSVSLSPFSLVRNCKFQSTYSDSLILSDFKVFKVSLYTQGVCYYFGIRSEDKEQAEEERSRWATDFARAIRLVTQSLFPPFTISCDPLASVKATEQRLMAGYLMHHDDVAVASVMYCELHPHSEGQAKLALYENDHCRTPLMDIIITERSVCCEKVGISCSCFAVENHQFSTRTVSERRLWLRAISNIKVKLQNHAPSPTSDEIRHYRLAIKEHLDTIRGTLQCKVHSDALLPRTQPQLQAQAPL
Ga0186257_1016511	Ga0186257_10165111	F015603	AVCAIPDAPPGAAMAGLGRCEGAGDRIRPALRARRAQVPAGAAGALLLLAGLASQWLPRALAQQDSGLTQGQDLSEVCYHENYDNVEPSVEIMDGETRFRQIRPNQTHRYFYRSFNVTTMNQPDQYRKLIINLEPCRGVVYLFVRKTRRCYPDPYSCINTRQAADCRWTHFMSEIDRSRDGTPTFFEVPLSSTKYFISVYATENAEYTLTVLADIGAFPRPGNSGKITARQLRELQVQLTWDEAEFYPTGISQSKQYWVYSSMLLENDNRTNMAVFMRPDKIMNTVCGLVNNTDRQYSLVPAATCVNGKCNTTIDGVITDKRYVFNIVAESARGHKMAYAGLIMRTDWEVIRQAASDQTLKVIGAVSGSVLGMVVIIYFLMLKLYG
Ga0186257_1023333	Ga0186257_10233331	F062433	ITAVNKNSLLAGSSIAQLLSKVNSTLQEEEEKMAKMRAEQKDTEELLARSKDELSQLISVVSQLHDLQQSASDVLPSVLKMGPERPRMSGKTPFFWQPSQEYANEFEVSGDCGEVVTKVNDFEDQGWVIPVGGAWRLMKGGIYRWTLCIESKCPNRPQLQIGIHGMKHSQPWRLITTSRCSWSRDDEPWQDRLGGDRLIDEGDFVHLEVDMRGISSKTGTLSLAINDEPYEQFFDDIPLNSSFPLIPVVSMGGAQSRVRLCPSY
Ga0186257_1023334	Ga0186257_10233341	F011850	RTVLVLACSLLLFAPSSHAFAPAGVARVGMPLRGKSVSARSARVTPAKMAMDPSQLSHIADGAQTFLSTLDTVPFIDEVTGEPQGFTSPKNHFASVIGLWVLFALPVWSAAYKQAGCTTPDWFGVSQVAEDAPGVGLLAKAAPEYNGPSFREGLEYVFSFVWKPPILIAWKPRADLDRDAMDPARDTVVSSLYKGLGGALDKTAVYDEEDQLLILSDIVTFEETDLGRRREAIAEASGWYTGNPSFGRSLIEYSEQTRKGKRDQGTVTISTEELAKLRAEAAKK
Ga0186257_1023646	Ga0186257_10236461	F021304	PCHDNPKEYPIVQFTAEECTCCFDLDEFIQDNDYVYVLFYSTKGRLNIDINSKFEQLAEEWKWSRIAFGRIDTDKDREMAKKWVEPHMVPTNVMYKFGRPVEVRPKDFEQIRDRYQGSPEGQKWMLTKYFGEDADGTNLHYAQPLMSAKKLKTFVKGNEIAIVGHFKKPNDLNHKLFIEAIWRLHQEIDRDDLGAGIGAVTLPSVTKKLDAKAPSLAVFLDGKAVDEDGVFAAERWTVKAVTTFLRQFLPLSDQDFQEGGSGARRGGEL
Ga0186257_1024145	Ga0186257_10241451	F012119	SSLPRPPPLERGDAARGECRPEPAAEMSFADSLSKVVQSKKVEQGKRLELAAKWNKYEAKLVDSAIDLFKARCVKEAEMQKCEATVSFEVLSREIPEFPKRALTDSTYFVESWGDGVSAEDWFYATRREKASWSPGAPVLFAEVLQGMLPKFIDKVKEQGFDSCNHEAGTWKVTVAWPHPDGENGKRRRRD
Ga0186257_1024652	Ga0186257_10246522	F074943	MAEETITLMQQKLETDSDIDESQRQIKRLLEENLEIWKSNLE
Ga0186257_1024833	Ga0186257_10248332	F000241	PLQPELAQEAFQLLPLKSSLKLIAMVSSSNLRRPILAAALIGAAVHSSLNFVGPVPAERSALTVARVSADYLERQGPKDSDSPFDGSAATGPGAEVEFKKRPFGILRYQPGQGMKGAMAMEIIPKSRYPGDPQGQAFAAGVQSGWVVKAINGQDVSTADFGVVMDMLDDEVADPRFSKSTKLAMDAQGGAKAPAVETPMKVTWASVPGFVYKGAEMKADGQDGYAR
Ga0186257_1025394	Ga0186257_10253941	F052609	MGRSFASFWETTCQEIKTSLVAMDKEGSGRVRLSDFYGANGQGEWRFGESEAYLRELGALDESSPARGPQVIIPNYLQAASNCIVSRKHYLVCCANECEDVLGEVEAAVGAPLAQPMDVLWVVGNLTSYDDDAAPVTEELVGQLRRIASSHVGRVP
Ga0186257_1026486	Ga0186257_10264861	F000076	LAQASGVEPSGLLRASRLPASFGAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186257_1027585	Ga0186257_10275851	F010767	GRSPFWLKEEGPYAVPPLFPQRPHHLMQFAAGSKMGDKANGEEPMKPGSTHCLEFDSWWNEGNVRRYVYIRYNISEGAFQMAIDEDSNLYHVPVVYGARTGEAVTVWDLYVGAELDILGRMTTLQRCSQTTAQWNKYWANRLLALRERLEEEIKKYDTRKREPWLSFKKAKQEAGSVDLRLLMGQVQSLGAQLNEYRPRLAAQLALPKEIYDIEDMPRQREAQEDPNTQ
Ga0186257_1028609	Ga0186257_10286091	F024727	FGSRKIASSRVASRLPPPAIMAKMADIVGWYSLSWKGGAFDVCLRPAGYFFCPKFQAPARWELDGNRIYVDWAKFGKYEFDYDPATKTMAGNALPKNEEDAGNWRKAEFARPLSPSEALLIGDGAGTEWDFQWSGGNFPVQFKADGYNHFKCEDFPAHAHWSMAEDKLKIQWGDFGTYELTVDAAAKTMEGGAVGGDWSTDWRKASLTKNLIDNKVLEACEHH
Ga0186257_1028687	Ga0186257_10286871	F033310	QDVRETRSPRMYIFPLMELLDVQLSPDVNLAISFQEEILLEGKREEELVLQIARRDMPKGEEIFLWPGRLSNSEMAVRHGISFPSNPIGIGRNTTEPPNWSLVKESNIRKEYDRYNCTSLESFELRFSPKGYPMRQFIKCFRVSWFLTNGWYSPAMADRQRELMKWPPPPKYSKDDWLAWTQADRECNSLITEYCKMMRQKLKDTMDSATAEDFRKSADPTDKLLWNLRGEESKTFKECVVLAKSIT
Ga0186257_1029461	Ga0186257_10294611	F000040	MKASLALLLTLAVSASAVTPVQKVIQLLENMASKGKEEKHQEQVQFAAYKQFCDDTSVEKTRAIAEAEEAIGMLKADIQEATSEASRLTKEIAGHDEDISVWTGDMKAATKVREMEKADYDAMHKDYSESVDALERAIAVLKKQSHDRSQASFVQVKALASVSLIPKEAKQAIEAFLQQDPEEGLAVSAPEAEGYEFQSSGIIEMLEKLLDK
Ga0186257_1030225	Ga0186257_10302251	F000040	MKASLALMMTLVVSTSAVTPVQKVIQLLENMASKGKEEKHQEQVQFAAYKQFCDDTSVEKTRAIAEAEEAIGMLKADIQEATSEASRLTKEIAGHDEDISVWTGDMKAATKVREMEKADYDAMHKDYSESVDALERAIAVLKKQSHDRSQASFVQVKALASVSLIPKEAKQAIEAFLQQDPEEGLAVSAPEAEGYEFQSSGIIEMLEKLLDK
Ga0186257_1030530	Ga0186257_10305301	F001618	RAFVAKTPGPPPQLPFPTMWRPDAGPCVAQVEEWGEHADDVEYIRQLKAMPKRILKRREIVVKSKDLERACKKQGKVNFSIATWPLSEYSKSSGLGDEAASLVHVFYESRDERKVLNAFSSANIELETAEAVPVDPSSTLAHEQEIMYSKQSLYIQDEYIYEEGPPMSTEELKKRFNM
Ga0186257_1030729	Ga0186257_10307291	F018723	LAQEGLCSAHRRAGAPGPQIARRWVGAPGHAAAAQLVMAGKDEAKPKAKAKGGKDQPFVQQSALKDVYPHFCDRKTKLMPLNDVPYVLRACGLVIYSEEEKKIRAEVEKIDGMGKPVSLKTLEDWMEENQKSYVRSYDDAYNALGTLCHEGIIGDKSYNINMPHLRHLVGEVGDKIKPETFDKIMKQGELPEAQRDGKCTLDEFISFLQK
Ga0186257_1030805	Ga0186257_10308051	F001618	KPSAPRQRGPALPVPTMWRPDAGPCVAQVEEWGEHADDVEYIRQLKAMPKRILKRREIVVKSKDLERACKKQGKVNFSIATWPLSEYSKSSGLGDEAASLVHVFYESRDERKVLNAFSSANIELETAEAVPVDPSSTLAHEQEIMYSKQSLYIQDEYIYEEGPPMSTEELKKRFNM
Ga0186257_1030974	Ga0186257_10309741	F047708	MAPLPGTEPPELARSKVINDTKWLIYCCCGGQGIGPFADPLVAAEVKQLCIRGSSSTTNIMDDDGLCNSVQVCLCIQQQMQIPPLENAPACAICNKKFGGSMGSTKWKATLFDQSKIMDETFWLYYFICSGCGINAKMDNGLFSAQGKSLCCRGYENLESPVIDGVFCSQVGTTLCFWQECQIPPAKPNPTIAICTWRLNKE
Ga0186257_1031322	Ga0186257_10313221	F010751	SRLAPACPAFIRCYLPLSSDNEAITMAMKRTILAAVVAIQMGSVGAALSRVESVKKMVAAKSLEAAGLPDPTCKTGIIALKEDGKSQACCAGYCGECTDYPTCSSVRGQNSTFACCKTEVLGRECGSAPANVCLKSCSESVPPCIMDEEKTFTTPDPTARTAASDCNEAVADWRAKAEAATAPATV
Ga0186257_1035362	Ga0186257_10353621	F000020	TAVAQALTVLNEFYAKAGEATALLQQQPEAPEIFDKPYQGMGGESGGVVGMLEVIEQDFARLEADTSMAEASASKEYETFMTDSKVDHAAKSKDIEHKSAKKQDEEQALVTKKGDLEGNQKELDASLAYYDKLKPSCVDAGVSYEDRVARRKEEIESLQESLKILNGEELA
Ga0186257_1035732	Ga0186257_10357321	F060583	FERVQAKVDAEDPGYGKVKGTLGCASAHFKAQATVMEDGPLMGVVFEDDSDPDQDFKARLWRLVTQELPCDWEVVSLMSRCPVGTCVSEHLARIAPDVNEPAWKCHSGVNWGMHGVLYRTSTLRSVQEKWKKAVFNMDVPRCLDVDVALASISDQVGFYAVPASQGPGFMQELSEGSSRYSINKQLEASEAAAKAA
Ga0186257_1035828	Ga0186257_10358281	F048326	MRFPGLLLPVLVGMAAWPAVQGAKFIIGQTANSGAFEVHFDDEKRHLDLLEDCHPGKACPPVVVMTGRQVGTIDVINCQEGVMYTFVNKGDLDAGVVVQHDGGLYGSKGIAQFGVGTCFCYKEGTLMCG
Ga0186257_1036222	Ga0186257_10362221	F000040	VQKVIQLMEGMATKGKEEKHAEQVQFAAYKQFCDDTSVEKDRSIEEAVEAISMLKADISSAVATSQQLTKEIAKHDEDVAVWTGDMKAASKVRQMEKADYDAMHKDYSESIDALQRAIAVLKKQAHDRSQAGSLAQVSALRTMVLIPAEAKKAIDAFLQQDPEEGLAVSAPEAEGYEFQSHGIIEMLEKLLDK
Ga0186257_1036701	Ga0186257_10367011	F016241	AADHHFGVLLNGSWRGWSQGGDKEWGAGRGVETVNHGNVHYYDAGMHAAHARCGDAGCALIVNPPNARTVEQFHIHFVRYMAYGMSLKRRLERKVCGTVGAWRSGGLPCHGKAAFFHGFPGVFSKALMTGGVSHASVIAWPRACGGSGTIVQLAYGCSIEHQIKGDYDPRHR
Ga0186257_1038371	Ga0186257_10383711	F082720	KVGYEGRLSVVSESQVHTDGVHRYLVQFSSGELSRADGVGFVFSPRLPCAKNIQRIVSIFVNQRGRICMRVFADIVRASAYVKPLELGDWVEMCVDLDKKVATFNIWSRTPMGWPPMTGQPTSTAEFVFGNKLGRLNQGDKASQQKQVKLNVGHLACVVKNVGVTVTICS
Ga0186257_1038647	Ga0186257_10386471	F054571	KTFRDDVYRSEQDVLLELYAPMRPQHRTYVTALDLVAEALRDVPSVKVVRMDTANNYVLPEFGITEKEKEKPSSIFFLRAAPEMRRRPRRFARGGGRPESLPEKLVRFVHREAKVPADWDVGARTRWVSDEAAKRILRLRALEKDYEKKMQEEWMQKEMEEFERYKRLGRFDNMPDLA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017487: Metatranscriptome of marine eukaryotic communities from Penn Cove, Washington, USA in F/2 medium with seawater, 15 C, 30 psu salinity and 102 ?mol photons light - Mesodinium pulex SPMC105 (MMETSP0467)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences