Sample 3300017376

3300017376: Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in f/2 medium with seawater, 25 C, 36 psu salinity and 270 ?mol photons light - Karenia brevis Wilson (MMETSP0201)

Overview

Basic Information
IMG/M Taxon OID	3300017376 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212337 \| Ga0186625
Sample Name	Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in f/2 medium with seawater, 25 C, 36 psu salinity and 270 ?mol photons light - Karenia brevis Wilson (MMETSP0201)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	101689527
Sequencing Scaffolds	26
Novel Protein Genes	33
Associated Families	17

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	4
All Organisms → cellular organisms → Eukaryota → Sar	9
Not Available	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	4

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Gulf of Mexico
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000007	Metagenome / Metatranscriptome	8691	Y
F000342	Metatranscriptome	1262	Y
F001154	Metatranscriptome	763	Y
F010590	Metatranscriptome	301	Y
F014575	Metatranscriptome	261	Y
F015603	Metagenome / Metatranscriptome	253	Y
F021304	Metagenome / Metatranscriptome	219	Y
F023602	Metagenome / Metatranscriptome	209	Y
F036711	Metagenome / Metatranscriptome	169	Y
F039907	Metatranscriptome	162	Y
F057101	Metagenome / Metatranscriptome	136	Y
F063312	Metatranscriptome	129	Y
F072407	Metagenome / Metatranscriptome	121	Y
F076818	Metatranscriptome	117	Y
F083566	Metatranscriptome	112	Y
F094848	Metatranscriptome	105	Y
F098581	Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186625_1016122	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1586	Open in IMG/M
Ga0186625_1019648	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1434	Open in IMG/M
Ga0186625_1025111	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1243	Open in IMG/M
Ga0186625_1025584	All Organisms → cellular organisms → Eukaryota → Sar	1227	Open in IMG/M
Ga0186625_1027899	All Organisms → cellular organisms → Eukaryota → Sar	1157	Open in IMG/M
Ga0186625_1029597	All Organisms → cellular organisms → Eukaryota → Sar	1107	Open in IMG/M
Ga0186625_1030219	All Organisms → cellular organisms → Eukaryota → Sar	1090	Open in IMG/M
Ga0186625_1033697	Not Available	996	Open in IMG/M
Ga0186625_1033698	Not Available	996	Open in IMG/M
Ga0186625_1034693	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	970	Open in IMG/M
Ga0186625_1036075	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	937	Open in IMG/M
Ga0186625_1043981	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	765	Open in IMG/M
Ga0186625_1044465	All Organisms → cellular organisms → Eukaryota → Sar	755	Open in IMG/M
Ga0186625_1044560	All Organisms → cellular organisms → Eukaryota → Sar	753	Open in IMG/M
Ga0186625_1045151	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	742	Open in IMG/M
Ga0186625_1045320	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	739	Open in IMG/M
Ga0186625_1051755	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	626	Open in IMG/M
Ga0186625_1052195	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	619	Open in IMG/M
Ga0186625_1052317	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	616	Open in IMG/M
Ga0186625_1052318	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	616	Open in IMG/M
Ga0186625_1054288	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	587	Open in IMG/M
Ga0186625_1055085	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	576	Open in IMG/M
Ga0186625_1055086	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	576	Open in IMG/M
Ga0186625_1060614	All Organisms → cellular organisms → Eukaryota → Sar	506	Open in IMG/M
Ga0186625_1060855	All Organisms → cellular organisms → Eukaryota → Sar	503	Open in IMG/M
Ga0186625_1061017	All Organisms → cellular organisms → Eukaryota → Sar	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186625_1016122	Ga0186625_10161221	F083566	MGEPEATCKITGEGCDEKPVTFNPLNLTVMKWDRDAKKYFSKPAGQLEAHVAVGGKDDWQMYLHGPMFRPWREMRSGDSMPPFYVQATFTNKVYRFEHVRKEATRGLPMQAVQKMVAYAEAPSTSFPIEDKNGTLTGMLVAEGQPFMINAPLDPKHRELDFGGVDYVSDNCTRIFPNPIDKKSHYKSGGDVVNTVSCHPYTGICFFSVWKFYDDQPPLWNNMTRKLMPDCLHYCVADSLEEMKGGCKKGGVVIDENGEEICSKHGVGAVHGMTVAFGENLVHKDPNEFDVFLVFTGGATFVGGESSMKKVTVKKTDSGDLQVLKCQPFGRDLFEASVNRTSPTGMAPVDVGGDHAWVDESGKHVWVSTFRYENVGVHMLDYETGDLIYSVHGTANYLKGNYAYSAGIHGGGWLGHPRGTLLLGTSACTHPKSACFPAPWNPVDKALGLEAKGLMYVIDLSELLPPASEGYELPADSGIIV
Ga0186625_1019648	Ga0186625_10196481	F014575	GLDTEGGHRNSTSSAGLLKEQVPGYIQDLFEKRLGGRGFGLNELAVLAATIEHLVHNEAIKRLGDAMKIHDRLPTSLLKKRQADEVLETYMTAYIMGEDLSNMTIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTAEQKTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLNLEEPGTGRVRLSDFYKPAVGGHWQFQESMEYLRQLGALDESDPVKPRVIVANYISSPTNCIASSSFYSVCCMDECEGLLGHLEQQIAAPEATSTQVAKLVSELSSSSVVAPRKLSQSLLDRLGEIAAQHGGRVPLHGRLFAQWMHHAFPRECPFPHLSGTTNPQTPDEWLEATGKDVTATHKEMQVHVDAVEADTSPSLNDADDEEIVLKALPWSPEEELLVVRPPHTENAVGGTFLRNLVMCMVVASVAYGLLGKASTTSKLAQGWSAEKQLV
Ga0186625_1024090	Ga0186625_10240901	F072407	TLLESWKIVNDKESNKDTFQQLASADTGAEKVVNAGQENTKATQKKSLWKNMMGTGNKKDGQKTEGGTEQNTKAGGQESGTGSANQVPTTYNEMFKFNAAVMGFGGNVWLQEVLDCFHNIVTNVSNSKRLQEECDILILRISRVTKGNVNFNEYKSCMLASLRSLLPKDWSTAHEVAWSWLWENVERLLAKNLGNPRKWEKALGKLYDALDENSAFELRKNIYIRFFAAAPAGQDFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRLLRRAIGCAPRGERASWCLIVQVGTQDISPLSWSIESGALEAASAMITDLLTVRADRDRYYYSMDQLFNRHPDIIKRLCNDAP
Ga0186625_1024260	Ga0186625_10242601	F072407	TLLESWKIVNDKETNKDNFQQLASADTGAKEIGNTGQDNTKPTSKKSLWKNIVGSGNKKDSQKTEGGTEQTAKAGGGQESGSMNTPTTYNEMFKFNAAVMGFGGNVWLQEVLDCFHNIVTNVSNSKRLQEECDILILRISRVTKGNVNFNEYKSCMLASLRSLLPKDWSTAHEVAWSWLWENVERLLAKNLGNPRKWEKALGKLYDALDENSAFELRKNIYIRFFAAAPAGQDFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRLLRRAIGCAPRGERASWCLIVQVGTQDISPLSWSIESGALEAASAMITDLLTVRADRDRYYYSMDQLFNRHPDIIKRLCNDAP
Ga0186625_1025111	Ga0186625_10251111	F021304	LLGLQFGSRLAAAEPCTENPKDFTIVQFTSEGCKCCYDLDEFIQDNDYVYVLFYSTKGRLNIDINAKFEQLAQEWKWTRINFGRIDVDKDRDMSKKWVEPNMIPTNVMYKFGRPVEVKPKDFEQIRDKYQGSPEGQKWMLTKYMGEDGEGSNLHYSMPLMSTKKLAKFIKTHEVAIVGFFRRDNDMHHKIFSESIWQLHQDIDRDDIGAGVAASTLQGVAKKEKAQVPSVVVYLDGKAVEQDGVYAEEKWKKKTLMDFLKQFLPLSDQDIQDDGLQAEESRTDL
Ga0186625_1025584	Ga0186625_10255841	F015603	LKQFCPADSFPVGVDGMELHERAHRWQPTCRQQLAGGRPVPMASPRRSARRAAPALLAALAMLTRAPVSHAAGHQGSVCAHELDTERVSPQTEIRDGETVYRDIRSNNTHRYFYSNFNVTTMNQPDEFRKLIINLEPCKGIVYLFVRKTRRCWPNPYSCIDVTPGKQRRVPAECKWTHFMSRIEGDRDGTPTFFEVPLSSTKYFISVYAPERSSYTLTMLADIGAFPRPGAEGRITARQMKELQVQISWDEAHFFPLGISRVKQYWVYSAMLLESDNRSNMAVFMRPDKIMNTVCGLQNNTDRQYDRVPAAMCSYGKCNATIDGVITEQRYVFNVVVESDRGFRMAYSGLVMRTDWTVIRQATSDKTVKVIGAVSGSVLGMVIIIYFFMLKLFG
Ga0186625_1027899	Ga0186625_10278991	F000342	MHGHGGGQQAPLGGRPGMMRPPTYAGVEGMKGERIEAGAAGSIFAPGKRRRMNLVAICLNIFMPWFLFCSLYGMMSFTVHYQHPTIAWFMVLMGFVISVLAGVLAASAKMRDRDPMWYTFAALGFFLATILAAVFGDMNFWYNMQPFYDIENLNTYPSVNPAREKGQQLMDAGRVYFADGSALDMQKAMGFKNLDIYCVAPIVNGQEQLASYDFWAVGINCCSGVSSDFRCGEFNNPHARSGLRLMRDDQRPFFRLAVQQAEAAYNIKATHPLFFYWMQDPVAEMNSYRDDGFKYYLLGIFTHFAWNLFCVVCAVVGFSKIGRY
Ga0186625_1029597	Ga0186625_10295971	F039907	AQAILAQVLAPVFRLAPESSAETSHPRSDTAMADLPWEGSTALAEVESGNSVVLLADASGSYYASMTPDGTPLGGTGVAQLTGAMEASVKKGEIKLPSAKDLESFAGQGPLIVDPTTGEVRVGTKAEADSILKDSAKDWPMMVAQVENTLQSSYQAALNYVPAEGGVHPQGGYVAKSGSYYPPAPALMPKDDALTKAPDLFKKSTFAWRSIYHPFVNSVFDPIGDGSIVAEVCFTPTPMRMYTDHRVMGQVVLPGVSHISLAAAVASVGMEGTGFKRNEFSINVHETFFERPYLVNDGNEIIAMVASQQQGGQVNLQQIPGTEMTYCRVARVDKEYGGPAPVKI
Ga0186625_1030219	Ga0186625_10302191	F039907	SVFKDRSQPGNSCHFSAATCECTMADLPWEGSTALAEVDAGSAVVLLGDASGSYYASLTPDGTPLGGTGVAQLTGAMEACVKKGEIKLPTAKDLESFAGQGPLIVDPTTGEVRVGTKAEADSILKDSAKDWPMMVAQVENTLQSSYQSALNYVPPDGGVHPQGGYVAKSGSYYPPAPALMPKDDALTKAPDLFKKSTFAWRSIYHPFVNSVFDPIGDGSIVAEVCFTPTPMRMYTDHRVMGQVVLPGVSHISLAAAVASVGMEGTGFKRNEFSINVHETFFERPYLVNDGNEIIAMVASQQQGGQVNLQQIPGTEMTYCRVARVDKEYGGPAPVKI
Ga0186625_1033697	Ga0186625_10336971	F072407	MFKFNAAVMGFGGNTWLQEVLDCFHNIVTNVSNSNRLQEECDILTLRISKVAKGNVNFNEYKSCMLASLRSLLPKDWSTAHEVAWSWLWENVERLLAKNLGNPRKWEKALGKLYDALDENSAFELRKNIYIRFFAAAPAGQDFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRLLRRAIGCAPRGERASWCLIVQVGTQDISPLSWSIESGALEAASAMITDLLTVRADRDRYYYSMDQLFNRHPDIIKRLCNDAP
Ga0186625_1033698	Ga0186625_10336981	F072407	MFKFNAAVMGFGANTWLQEVLDCFHNIVTNVSNSNRLQEECDILILRISKVAKGNVNFNEYKSAMLASLRSLLPKEWSTAHEVAWSWLWENVERLLSKNLGNPRKWEKALGKLYDALDENSAFELRKNIYIRFFAAAPAGQDFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRLLRRAIGCAPRGERASWCLIVQVGTQDISPLSWSIESGALEAASAMITDLLTVRADRDRYYYSMDQLFNRHPDIIKRLCNDAP
Ga0186625_1034693	Ga0186625_10346931	F072407	GFGTNLWLQEVLDCFHNIVTNVSNSSRLQEECDILVLRISKVAKGSVNFNEYKSCMLASLRSLLPKDWSTAHEVAWSWLWENVERLLAKNLGNPRKWEKALGKLYDALDENSAFELRKNIYIRFFAAAPAGQDFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRLLRRAIGCAPRGERASWCLIVQVGTQDISPLSWSIESGALEAASAMITDLLTVRADRDRYYYSMDQLFNRHPDIIKRLCNDAP
Ga0186625_1036075	Ga0186625_10360751	F076818	FLLTNSKCREAFFCHLPFEHQSAIMAFAFAQTIFQNQMLFQSMLGLLCLSCVLAADEPCQSALDNGKINPVSKVSGDLWMVDPFIIPPKGTCKQMPVDGEGKYLNMDFDAYPNITAQCDDRIKFVMRTVSRQQRHGVYLTEFNGDVTADSWPPCPPPVFNDEKFCDVRLNESDQKDTQCQGYTQLYPLLMFGPNDTIIKEYTTPTLRSMVAAGKDTDVLVFSCPWIKGRRGTSGIYKSHCIEGMFVQVTVQGCGTQSTSNAGSVEGSAASLLVVFVATVINHFG
Ga0186625_1040772	Ga0186625_10407721	F036711	ATPTPARGALLSPLSLSARASREGASGCEAERAAAGGIREYHLFGASASVMPVWQNVNLKQKAIFEIIQREDTRDLPYYLNDEELDFFIRGIACGPHAKTYLPQLVEREKSPIYIARGYAPPTYSRVVKIRFYGPDPLLKDAGPNWPAGKPGELMEYIIGWRWLYAYWDGPLVDEVDEAWDTKQWPDIARDNWTWENLRFVTPPYWVPEDGKPWRAGRSDALPLRVTKGKGKGKAPGKGSADDEASGKGTK
Ga0186625_1043981	Ga0186625_10439811	F094848	CTSRDVLLVERTACVNQQRGPADFFKGTTSAMPIDYSKWDKIGDDSDEETAAPPKKTSPPEDVSPPTTPAASGAVMSSVPEEHKRPLDDAPTIELPAGPFLKYYTEQMTVPQRMQTLIKLWNSSQQEQRVEFLRHLIDIIGNPAISNRIKGGQEILKDLDENYYTGVSYPAHWVDQFKDVLSVEDKKVVFEKLFKALEPTEQGLVLGTLM
Ga0186625_1044465	Ga0186625_10444651	F010590	MSRSVSTLAIHPEHYGKPKGMTWQGVKETDRFPPMYPDHSQVFEEYMSHPTMAPSRHEGTLAKSAGLLELHYNTMRKKQWERSKSSCHVQPPTMSRPFTATVGYGGFIPGKASNNVCGCTFAQGSRLARELRPLAGVGSGMVFTFGKSSSMPSLTGDAYNSSRPAMQLDSTQYR
Ga0186625_1044560	Ga0186625_10445601	F010590	MTWQGVKETDRFPPMYPDHSQVFEEYMSHPTMAPSRHEGTLAKSAGLLELHYNTMRKKQWERSKSSCHVQPPTMSRPFTATVGYGGFIPGKASNNVCGCTFAQGSRLARELRPLAGVGSGMVFTFGKSSSMPSLTGDAYNSSRPAMQLDSTQYR
Ga0186625_1045151	Ga0186625_10451511	F063312	MPEYKLATNANNKATELPLCRIQGSVQPNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLFPPETNPKRKAYLKFKNLKTEKFYCRYGKNDKDKPTDCKPPPAEITSRDCSLPSTSTTNCATEDELNPYDPTVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVALGTLLERFGPVNVQSSLLLFGAIWVFAAAGISAPWNY
Ga0186625_1045320	Ga0186625_10453201	F063312	MPEYKLATNANNKATELPLCRIQGSVQPNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLFPPETNPKRKAYLKFKNLKTEKFYCRYGKNDKDKPTDCKPPPAEIEAKDKCTASLTTNCATEDDLNPYDPTVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVALGTLLERFGPVNVQSSLLLFGAIWVFAAAGISAPWNY
Ga0186625_1046585	Ga0186625_10465851	F098581	GLDTEGGHRNSTSSAGVLKEQVPAYIQDLFEKRLGGRGFGLHELSVLAATIEHLVHNEAIKRLGDAMKIHDRLPTSLMNKRQADEVLDTYMTAYIMGEDLSNMTIYDVLDLKAEMPQLYLAWNETKDFVRKTRQDVTLSDGTTEQRTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLNLEEPGTGRVLMSDFYKPAVGGHWQFQESVEYLRQLGALDESDPNKPRVIVANYI
Ga0186625_1046588	Ga0186625_10465881	F098581	GLDTEGGHRNSTSSAGLLKEQVPGYIQDLFEKRLGGRGFGLNELAVLAATIEHLVHNEAIKRLGDAMKIHDRLPTSLLKKRQADEVLETYMTAYIMGEDLSNMTIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTTEQKTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLSLEEPGTGRVRLSDFYKPAVGGHWQFQESVEYLRQLGALDESDPNKPRVIVANYI
Ga0186625_1051755	Ga0186625_10517551	F057101	PGMPGMAKQPKADKAPEPEPQQDDGKIDPDVQELGDYFSIEDRWIVRLNETMKKRQDTKEQDLAKLYEVLERARSPTGLLTVKIGEMESGXXXXHDKDVERLAKKFKLDEHVKSRLTELSVRRKDTKDEDLDRLEQHLNYCKQPNAMATLLAGKLLEGQVDTLPDMVEAEKVMDKYRLDDGAKSKLREIVEKRAEDKEEVLNEVRRQL
Ga0186625_1052195	Ga0186625_10521951	F036711	EGDELDFFIRGIAWGPHRDTYLPQLVERHKRPIHVARGYAPPTYSRLVKLRFYGPDPVLKDHDGWDAGDEGEVMEYVIGWRWLYAYWPGPLVDEVERAWDTPMWPTLASPDWTWEGLKFCVPPYYVPEDGLPWRSGRDIEYQPIRVTKGKGKGKLRDGAAEKAVGRGVAAAAPGASSQASSRADENQASHEAVD
Ga0186625_1052317	Ga0186625_10523171	F063312	AQAISGQAFCKFPKLRSQVERPCSFSIAAMPEYKLACNANNKATELPLCRIGGSVQSNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLYPPEDNPKRKAYLKFKNLKTEKFYCPYGKNNKDKPTDCKPPPDEIKNKPKCTAGVTTNCATEDELKQYDPSVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVAL
Ga0186625_1052318	Ga0186625_10523181	F063312	AQAISGQAFCKFPKLRSQVERPCSFSIAAMPEYKLACNANNKATELPLCRIGGSVQSNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLYPPEDNPKRKAYLKFKNLKTEKFYCPYGKNNKDKPTDCKPPPDEILNKPKCAAGVTTKCATEDELKQYDPSVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVAL
Ga0186625_1053787	Ga0186625_10537871	F000007	MSRFVPLLLLALFTPSVSVAVAAPEDDLAKEMTHDLEMNFNKIAPFGREDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLAHLHEDEAPVETDKLKSFH
Ga0186625_1054288	Ga0186625_10542881	F063312	MPEYKLACNANNKATELPLCRIGGSVESNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLYPPEDNPKRKAYLKFKNLKTEKFYCPYGKNNKDKPTDCKPPPDEVLNKPACTASVTTNCAMKQYDPSVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVAL
Ga0186625_1055085	Ga0186625_10550851	F023602	ALRIARVAKGNINLAEYKSCMLASLRSLLPKSWDSAHEVAWTWLWENVERLVLRIHGQPPVWEKALGKILGSFDEESKFELRKEIYARFFNLAPAGQDFFKQSNTYLHFIADKILDMTLQIYQNPVKMVDDISALGLRHVGYGIPTELFGPFVTACVEVLMGRTSDETTVESFRWSLGLISKMLVRTITEGC
Ga0186625_1055086	Ga0186625_10550861	F023602	ALRIARVAKGNVNLPEYKSCMLASLRSLLPKSWDSAHEVAWTWLWENVERLVLRIHGQPPVWEKALGKILGSFDEESKFELRKEIYARFFNLAPAGQDFFKQSNTYLHFIADKILDMTLQIYQNPVKMVDDISALGLRHVGYGIPTELFGPFVTACVEVLMGRTSDETTVESFRWSLGLISKMLVRTITEGC
Ga0186625_1055840	Ga0186625_10558401	F000007	SGLAPDCPPVPAILQPTEAMAYYVRALALLALCACALKAPEDDLAKEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLAHLHEDEAPVETDKLKSFH
Ga0186625_1060614	Ga0186625_10606141	F001154	ILAQAILVQACCCSRSLRVPAFSHCAHSNMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDITEEKLKEVIQLPPITIENCHEREDGDLQWDEITFEEEVSGKYWHAVIMALHRLREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0186625_1060855	Ga0186625_10608551	F001154	ILAQAILAQACCCYRYLRLPAFSHCAHSNMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDITEEKLKEVIQLPPITIENCHEREDGDLQWDEITFEEEVSGKYWHAVIMALHRLREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0186625_1061017	Ga0186625_10610171	F001154	CLIQWHCSQREFALLLLLTNKMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDITEEKLKEVIQLPPITIENCHEREDGDLQWDEITFEEEVSGKYWHAVIMALHRLREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017376: Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in f/2 medium with seawater, 25 C, 36 psu salinity and 270 ?mol photons light - Karenia brevis Wilson (MMETSP0201)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences