Basic Information | |
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IMG/M Taxon OID | 3300014055 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0116849 | Gp0137220 | Ga0119878 |
Sample Name | Sewage treatment plant microbial communities from Vermont, USA - ANOX_W |
Sequencing Status | Permanent Draft |
Sequencing Center | Norwich University |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 417698152 |
Sequencing Scaffolds | 24 |
Novel Protein Genes | 24 |
Associated Families | 24 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Proteobacteria | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1 |
Not Available | 6 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 3 |
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1 |
All Organisms → cellular organisms → Bacteria | 2 |
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Pycnogonida → Pantopoda → Nymphonidae → Nymphon → Nymphon striatum | 1 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2 |
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 2 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum | 1 |
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Sewage Treatment Plant Microbial Communities From Vermont, Usa |
Type | Engineered |
Taxonomy | Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant → Sewage Treatment Plant Microbial Communities From Vermont, Usa |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
Location Information | ||||||||
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Location | USA: Vermont | |||||||
Coordinates | Lat. (o) | 43.727094 | Long. (o) | -72.425964 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000676 | Metagenome / Metatranscriptome | 941 | Y |
F001844 | Metagenome / Metatranscriptome | 627 | Y |
F002571 | Metagenome / Metatranscriptome | 547 | Y |
F003544 | Metagenome / Metatranscriptome | 480 | Y |
F010528 | Metagenome / Metatranscriptome | 302 | Y |
F012885 | Metagenome / Metatranscriptome | 276 | Y |
F020930 | Metagenome / Metatranscriptome | 221 | Y |
F021521 | Metagenome / Metatranscriptome | 218 | Y |
F021596 | Metagenome / Metatranscriptome | 218 | Y |
F025842 | Metagenome / Metatranscriptome | 200 | Y |
F026489 | Metagenome | 197 | N |
F028103 | Metagenome / Metatranscriptome | 192 | Y |
F038871 | Metagenome | 165 | Y |
F039794 | Metagenome / Metatranscriptome | 163 | Y |
F044578 | Metagenome / Metatranscriptome | 154 | Y |
F050165 | Metagenome / Metatranscriptome | 145 | N |
F050494 | Metagenome / Metatranscriptome | 145 | Y |
F054132 | Metagenome | 140 | Y |
F057612 | Metagenome / Metatranscriptome | 136 | Y |
F064854 | Metagenome / Metatranscriptome | 128 | Y |
F075045 | Metagenome / Metatranscriptome | 119 | Y |
F078884 | Metagenome | 116 | Y |
F084124 | Metagenome | 112 | Y |
F097376 | Metagenome / Metatranscriptome | 104 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0119878_1002986 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5429 | Open in IMG/M |
Ga0119878_1009459 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2747 | Open in IMG/M |
Ga0119878_1015378 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 2123 | Open in IMG/M |
Ga0119878_1024558 | Not Available | 1660 | Open in IMG/M |
Ga0119878_1026075 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1607 | Open in IMG/M |
Ga0119878_1042098 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1244 | Open in IMG/M |
Ga0119878_1049165 | Not Available | 1145 | Open in IMG/M |
Ga0119878_1059740 | All Organisms → cellular organisms → Bacteria | 1027 | Open in IMG/M |
Ga0119878_1060550 | Not Available | 1020 | Open in IMG/M |
Ga0119878_1067713 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii | 957 | Open in IMG/M |
Ga0119878_1080634 | Not Available | 870 | Open in IMG/M |
Ga0119878_1082007 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Pycnogonida → Pantopoda → Nymphonidae → Nymphon → Nymphon striatum | 862 | Open in IMG/M |
Ga0119878_1091914 | All Organisms → cellular organisms → Bacteria | 809 | Open in IMG/M |
Ga0119878_1095133 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 794 | Open in IMG/M |
Ga0119878_1114627 | Not Available | 716 | Open in IMG/M |
Ga0119878_1116860 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 708 | Open in IMG/M |
Ga0119878_1128702 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 671 | Open in IMG/M |
Ga0119878_1129768 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 668 | Open in IMG/M |
Ga0119878_1143668 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum | 632 | Open in IMG/M |
Ga0119878_1153555 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 608 | Open in IMG/M |
Ga0119878_1159503 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 596 | Open in IMG/M |
Ga0119878_1178143 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Crateriforma → Crateriforma conspicua | 559 | Open in IMG/M |
Ga0119878_1179146 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae | 557 | Open in IMG/M |
Ga0119878_1211195 | Not Available | 505 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0119878_1002986 | Ga0119878_10029861 | F012885 | MPYRIRWEGHGVYRRFYGVVTRQEFRDAYEEMCGDVRYEGIRYIISDYLEALPDPDLTERDLRAQARLERLRFYDSPDTVQAMIGTDPEIVEYIRYYESLRVSPHCLGYFATVADARRWIAGNPRHGWSRPPASAASGPTAPHR* |
Ga0119878_1009459 | Ga0119878_10094594 | F028103 | MPLSLSLPAVESRPANPPEIRLAKVSPWLDECLKREPIIAARVIGDALAATNRVAMSDSKRLDLAERYWDAAGLLWLPLERQFVRASHPLSGEALEAAKAALTLSNELAVAYKHLLASEADKRLSMGGQRLLVALVHRCLQGTTRVLVNSYLSYAPVPPRTWHDAHLIYAFARERNIHLIPVAPDQPEATPDRLTIQMLLLALANPYGFLPGQLPIVLRYVQEYAHWAKLTDIAPVHRMAKAVAIVPVGHDFPPFSANKGGSIEGSKLFLLTFDLAFQIQEQLRALEAGGDVPAG |
Ga0119878_1015378 | Ga0119878_10153783 | F020930 | EDKFGSGGMVELDTGNARYLIRFTQTLEQQAGWSWAMFNAVRMLSG* |
Ga0119878_1024558 | Ga0119878_10245582 | F097376 | MKKAVSPKKNKTAADGVPQEKKQTKTGPVELDLADLKKVSGGLPNGTWNRVK* |
Ga0119878_1026075 | Ga0119878_10260752 | F000676 | RIACAVAAKVRIGLSRICFELTQKDVGDATFEVGGSEQIEVYAVADGPRTRRRIPDEHDSLAASLSSFSDPMWQVKDRSIAGLRIAASGGIGQALTLGALVAVRQSDLSDWVLGVVRRLNKVSNDEVEAGMSIIADRLVPVTLHAVRQAKDDMGFVVDGIDVSTMGARFHGLYLPPPSRPDKPLAVKTLIVPTQEYAEGRSVILTTGRSVYTVALRHLVEQRADWSWTAVQIVEKKSRV* |
Ga0119878_1042098 | Ga0119878_10420982 | F021521 | MAGYSHRTAQPPILAVFLPWGVSAGAGRIRPASAKVRVLIF* |
Ga0119878_1049165 | Ga0119878_10491652 | F025842 | MSIETHIPARDPRTALVREKYFSLRPKPLERWLWQQGLPQAAERVFWVHWEEGMKAGDWCSQIPLRLVASLCCVDSSTVTRAYQVLKKLDLIRREDPGRDPGNPFQQATAITEVRIPRELLTELSREPNRPQRRQDEEGGDQRHAAASTRAAPASGAVA |
Ga0119878_1059740 | Ga0119878_10597403 | F050494 | RGRYAGRTFIPEGPLPDTEGLAELVIIPAPPRPRGSVADAFGTATVLRSGDDILAQIRAERDEWGDR* |
Ga0119878_1060550 | Ga0119878_10605501 | F039794 | MTVHAVLPSAFLYSVGAPDIQHFAAQYPARRFPCQRFDAALASDAA* |
Ga0119878_1067713 | Ga0119878_10677132 | F010528 | MFKRIFDEYRKAVESSFEMQRELYRQWMNGWPVKPPQGAAGPSASDVKEQIHSYQKKWSRTLAETMERHREALNEQYKSGIEAIQTAFQTTEAKTPEEYWRLTQEFWRKSIDSYKTAYESQSKYLQSLAEMWLEMVTRGKV* |
Ga0119878_1080634 | Ga0119878_10806341 | F064854 | GTLLYAEFGALSGLDAPEARFLHSAVRDAVRMAKRNGNYSARFHNYRVGAWREPLGSRLVTVTWRVSLYDRPLFGDTEILKAPLCAAV* |
Ga0119878_1082007 | Ga0119878_10820072 | F038871 | MFGFLTSGTKDVADPLVSAKSVAAWLRQLPPLDVIGRQQQVMRAFDAMRQSRKPVDLARVQAVEYLDAALG |
Ga0119878_1091914 | Ga0119878_10919141 | F026489 | MRSARKVLLAEGCSLLVAKENQKTTSDFDALEPRKRGCSPLLTPKRRATPEKTEDSRLFGVKIF* |
Ga0119878_1095133 | Ga0119878_10951331 | F001844 | GQVEALLRIDGRVEPIIAELTRQYTQNYQKSTNIESRLWHSVFDLVKAFIAAYGIALKAGYPRADNKRWRAILPWVIVRLAHYRGLDGKYRLFRYSHWIPAQWREFHELYEFARMRGWQREQLIFGVGAFAKPGVSFEQEYLKTLLLMRLDSGNFTPDQVEWVARQLEDWTPTLALTPPPSEGAPFFVDLTGTTGLRRRDRAQAGGRVMFLDAAPIYARVVERMRWLPEQDSELPKAGELPAREQRLLLMRLASLFGLDAIAQA |
Ga0119878_1114627 | Ga0119878_11146272 | F075045 | VHFPDGTNHGTTSMMVDHHSTNVTSGRYSGSGDAGTFNMSLSPMWDRPASIGTVAGVYTRSTSNGYTMTMTMSANGQLTASDSRGCVINGSVGVPDATHNLYRIDATVTSCGSLDGTYSGMGALLDADAMQDWMTAMHPLEHGGHSHGGSMMGGSPMMGRNTVPTGQRNLFMFSLVNSQNAMMDALAR* |
Ga0119878_1116860 | Ga0119878_11168601 | F054132 | GNRFFVHEKVYDAFAAKLAERIWQAIYDLSQGFMYSYQTALEEALRQSQNARWKPLTPLLFARLIHYYGTDAKLRVFRFERWIPAKWMDLHRTYLRASELGIERQSAVLGSAGPNATPWTVEQEFLNVLLIHQLNTGNMSPPQLDWAMSQLRAWSRRLALDAGPRTPEGFFVVLAGKTGLGRRTGQDSGSMLRYLDTTPLAESLERAISALRQAEATDQGLSTLEAVARALQAMEG |
Ga0119878_1128702 | Ga0119878_11287021 | F003544 | AATAYKAALVVLLFDRGISGKIAGQEIRGLRAALPPDLPLVVSGRAVNLLAKPIADVHTAADFSSVMTRMRALGVLPAVPVSLVGILPDLPQRA* |
Ga0119878_1129768 | Ga0119878_11297681 | F002571 | MKNSNSADSPGSPHSAAPKLLGFFPWQQLKSKRISYFTLPLIIMATVVEFVILATGWKYQQKVCLPQGMGVTFFGIGPIGATILAVELLKLPLAVWTA |
Ga0119878_1143668 | Ga0119878_11436681 | F050165 | AVAGQVEHLDLVLVLTFWIVSEYRPMNPTIERALGASTPALRCLAVLDAMLVPALGLYWIKTLPATGGLVGAVLGVFCLWIGARRAYRALYEFEAYRWLTLRLAKLAIATWVVMAMVKLVWFIQGSL* |
Ga0119878_1153555 | Ga0119878_11535551 | F078884 | VQEAWVKRLPPGELRPMQRNGKKYFIYPDASRNQVYVGGPQEYDAYVQLHPDSRKDPQDAANKSSAYRKKQDETMRKATARDLSDPFLGVTWADLGW* |
Ga0119878_1159503 | Ga0119878_11595031 | F044578 | KAEYESAGFLLRQVLKEPVDPGVAPEREVNKLMKPTALADLDTQIKAKEAELLAVNNKRRERTAQVGEGAQKLRQEFDTRSRTKREEADRNRAELLAAYAAQEKEWKVEEKQIDTDLAGAVLNVDALRAEADAARKKAEGYYEAREAAIRHTQVHRIATTVEIVRGLILGERPMSITASAKERGDILTDQISMVRISV |
Ga0119878_1178143 | Ga0119878_11781433 | F021596 | MHEVREFAGHADIRTTEVYFVRKEEDAEVAARRIQIRGTGRKGE* |
Ga0119878_1179146 | Ga0119878_11791461 | F084124 | LLFGGLNKQAKAFARAIKENTLHFHSQRNALTMFLAFLFIMAVACFNKLSFSTQTAWLFAPDKLLYRKIFMGAAQTRNF* |
Ga0119878_1211195 | Ga0119878_12111951 | F057612 | LTAQAEAQQAAAQAQWQAEAEEKTRAAVEHFKGLLARAEIERDEAKQFAAEGFRQVQNLEKKLTDASSLLAGWKNGKSAVASPGWEG* |
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