Sample 3300013252

3300013252: Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station6_GOM_Metagenome

Overview

Basic Information
IMG/M Taxon OID	3300013252 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118455 \| Gp0134741 \| Ga0116817
Sample Name	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station6_GOM_Metagenome
Sequencing Status	Permanent Draft
Sequencing Center	Georgia Institute of Technology
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	90044609
Sequencing Scaffolds	56
Novel Protein Genes	62
Associated Families	56

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus → Ostreococcus tauri	1
All Organisms → Viruses → environmental samples → uncultured marine virus	4
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium TMED154	1
All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Hypoxic Microbial Communities From The Gulf Of Mexico, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Hypoxic Microbial Communities From The Gulf Of Mexico, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine oxygen minimum zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: Gulf of Mexico
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003440	Metagenome / Metatranscriptome	486	Y
F003637	Metagenome / Metatranscriptome	476	Y
F004819	Metagenome / Metatranscriptome	422	Y
F008029	Metagenome / Metatranscriptome	340	N
F008747	Metagenome / Metatranscriptome	328	Y
F012018	Metagenome / Metatranscriptome	284	Y
F016795	Metagenome / Metatranscriptome	244	Y
F017831	Metagenome / Metatranscriptome	238	Y
F023489	Metagenome / Metatranscriptome	210	Y
F025320	Metagenome / Metatranscriptome	202	Y
F025996	Metagenome	199	Y
F026855	Metagenome / Metatranscriptome	196	Y
F028516	Metagenome	191	Y
F029710	Metagenome / Metatranscriptome	187	Y
F030000	Metagenome / Metatranscriptome	186	N
F030122	Metagenome / Metatranscriptome	186	Y
F030441	Metagenome / Metatranscriptome	185	Y
F031448	Metagenome / Metatranscriptome	182	Y
F032237	Metagenome / Metatranscriptome	180	Y
F032304	Metagenome / Metatranscriptome	180	Y
F032678	Metagenome / Metatranscriptome	179	N
F034541	Metagenome / Metatranscriptome	174	N
F036279	Metagenome / Metatranscriptome	170	N
F037175	Metagenome / Metatranscriptome	168	Y
F040645	Metagenome / Metatranscriptome	161	N
F040846	Metagenome / Metatranscriptome	161	N
F042385	Metagenome / Metatranscriptome	158	Y
F043607	Metagenome / Metatranscriptome	156	Y
F044326	Metagenome / Metatranscriptome	154	Y
F045676	Metagenome / Metatranscriptome	152	Y
F046080	Metagenome	152	Y
F048843	Metagenome / Metatranscriptome	147	Y
F049683	Metagenome / Metatranscriptome	146	N
F052625	Metagenome / Metatranscriptome	142	Y
F052634	Metagenome / Metatranscriptome	142	Y
F053965	Metagenome / Metatranscriptome	140	N
F054876	Metagenome / Metatranscriptome	139	N
F055777	Metagenome / Metatranscriptome	138	Y
F057364	Metagenome / Metatranscriptome	136	Y
F062791	Metagenome / Metatranscriptome	130	Y
F063590	Metagenome / Metatranscriptome	129	Y
F065241	Metagenome	128	N
F065664	Metagenome / Metatranscriptome	127	N
F070146	Metagenome / Metatranscriptome	123	N
F076169	Metagenome / Metatranscriptome	118	Y
F077161	Metagenome / Metatranscriptome	117	N
F077772	Metagenome / Metatranscriptome	117	N
F081298	Metagenome / Metatranscriptome	114	N
F083376	Metagenome / Metatranscriptome	113	N
F085235	Metagenome	111	Y
F089019	Metagenome / Metatranscriptome	109	N
F091894	Metagenome	107	N
F093745	Metagenome	106	N
F093970	Metagenome / Metatranscriptome	106	Y
F095423	Metagenome / Metatranscriptome	105	N
F101314	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0116817_1000388	All Organisms → cellular organisms → Bacteria → Proteobacteria	3461	Open in IMG/M
Ga0116817_1000740	All Organisms → Viruses → Predicted Viral	2572	Open in IMG/M
Ga0116817_1000855	All Organisms → Viruses → Predicted Viral	2418	Open in IMG/M
Ga0116817_1002646	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus → Ostreococcus tauri	1560	Open in IMG/M
Ga0116817_1002947	All Organisms → Viruses → environmental samples → uncultured marine virus	1497	Open in IMG/M
Ga0116817_1003070	Not Available	1471	Open in IMG/M
Ga0116817_1003260	All Organisms → Viruses → Predicted Viral	1438	Open in IMG/M
Ga0116817_1003647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1376	Open in IMG/M
Ga0116817_1004957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1223	Open in IMG/M
Ga0116817_1004981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1219	Open in IMG/M
Ga0116817_1005258	All Organisms → Viruses → Predicted Viral	1193	Open in IMG/M
Ga0116817_1005448	All Organisms → Viruses → environmental samples → uncultured marine virus	1177	Open in IMG/M
Ga0116817_1006857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.	1077	Open in IMG/M
Ga0116817_1007182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1059	Open in IMG/M
Ga0116817_1008149	All Organisms → cellular organisms → Archaea → Euryarchaeota	1012	Open in IMG/M
Ga0116817_1008784	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	984	Open in IMG/M
Ga0116817_1010014	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	934	Open in IMG/M
Ga0116817_1012602	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
Ga0116817_1013832	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	826	Open in IMG/M
Ga0116817_1014517	Not Available	811	Open in IMG/M
Ga0116817_1014676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	808	Open in IMG/M
Ga0116817_1016161	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	779	Open in IMG/M
Ga0116817_1018620	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium TMED154	738	Open in IMG/M
Ga0116817_1018671	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	738	Open in IMG/M
Ga0116817_1020864	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	707	Open in IMG/M
Ga0116817_1021187	All Organisms → Viruses → environmental samples → uncultured marine virus	704	Open in IMG/M
Ga0116817_1021470	Not Available	700	Open in IMG/M
Ga0116817_1021492	Not Available	699	Open in IMG/M
Ga0116817_1024731	Not Available	666	Open in IMG/M
Ga0116817_1026177	Not Available	652	Open in IMG/M
Ga0116817_1026463	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
Ga0116817_1027244	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
Ga0116817_1027657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M01	640	Open in IMG/M
Ga0116817_1027922	Not Available	638	Open in IMG/M
Ga0116817_1029119	Not Available	628	Open in IMG/M
Ga0116817_1030053	Not Available	620	Open in IMG/M
Ga0116817_1030082	Not Available	620	Open in IMG/M
Ga0116817_1030525	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	616	Open in IMG/M
Ga0116817_1030958	Not Available	613	Open in IMG/M
Ga0116817_1033655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bacteriovoracales → Halobacteriovoraceae → Halobacteriovorax → unclassified Halobacteriovorax → Halobacteriovorax sp.	595	Open in IMG/M
Ga0116817_1033955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
Ga0116817_1034808	Not Available	588	Open in IMG/M
Ga0116817_1035046	Not Available	587	Open in IMG/M
Ga0116817_1036354	Not Available	579	Open in IMG/M
Ga0116817_1037032	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
Ga0116817_1039028	Not Available	564	Open in IMG/M
Ga0116817_1040829	All Organisms → Viruses → environmental samples → uncultured marine virus	555	Open in IMG/M
Ga0116817_1042134	Not Available	548	Open in IMG/M
Ga0116817_1043225	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	542	Open in IMG/M
Ga0116817_1044957	Not Available	535	Open in IMG/M
Ga0116817_1045716	Not Available	531	Open in IMG/M
Ga0116817_1046121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED202	529	Open in IMG/M
Ga0116817_1046655	Not Available	527	Open in IMG/M
Ga0116817_1046852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	526	Open in IMG/M
Ga0116817_1052978	Not Available	502	Open in IMG/M
Ga0116817_1053383	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0116817_1000388	Ga0116817_10003882	F095423	MRIHNLITKRALLAFSGIFFAFSISADPFLHNDSTEEDSIECHICSNDVTESSIDIDKISEVAKEIPKKITSASLLDPQLSTSYSTRAPPTI*
Ga0116817_1000740	Ga0116817_10007402	F032237	MSEENRFIDKTTSLKTVERVKFSLKNFSKGSKIEISWAFNPEDSSHVDQFLETDPEKNNILTALQGFKKLCEDNLGVKILEDE*
Ga0116817_1000740	Ga0116817_10007405	F053965	MGKLADAIKAYKIAPINSPAEREAKEIIIQITESQWRKDNVGREFKMPKKYDNKKQQAIFTEPQFVFIGNFIFGRHEFCENCRLYKGLLTYTNGQMVYAKPHVT*
Ga0116817_1000855	Ga0116817_10008552	F053965	MGKLADAIKEYKTAPINSPAERAAKETILQITESQWWKDNVGREFKMPKKYDNKKQQAIFTEPQFVFIGNFIFGRHEFCERCRLYKGLLTYTNGQMLYAKPYIT*
Ga0116817_1000855	Ga0116817_10008553	F077161	MRNLTLPEIQARFDRHAKLHRFEVDKLFEKIKHKPFTEMQYRYLEIGIRHQFIYDIETSDFDPEQNFIICYCGILRDIVTEEIEHVQDSITKSDIKKAVSQSTFDFDKRLLTTLSHNMKQAHHVVGHYSTKFDNPYFRSRCLLTKQTDLIPGYGYQFYGDTWRMMKSTMKAKRNTLKNFIRQTTGNDEKTFVDLKYWYIT
Ga0116817_1002646	Ga0116817_10026461	F054876	LGLIHGLVYGIVPVAPWFVALKRYLLEGKEKGQLAVAGTVVGQVSLLALTFFGWSQVLWVWYYFEPALIILGTMAVVRCALDCWVEQPSSLQATVVPLANKKEGFYYFLVNFGLMFCNPTHFEGSQTLISSIPGNRYFYLVAFTITYTAIIFAFWATVGHRIFGKACSGFGAQQTLNRYRMRRVAVAMVAALFIQFGNCTPEALVIYHFDSLLAYTPFEQLKHFKTRGYTWEPVNNNGSEFTRQSPRSTNKSGILAEQNPRSYIQNKSMWNTETRYDECNQTRERELSNEDWNNEATFHEFNGINQATLHARLIPFNLYMVPNWEKHENKEYLLTLRKIRNEMDEKLLSEGSILEKAALLPFSDNWEYEVDYLTSPRLLEKNAESKASFEDMRKLIRKTKWTSDHLNLGNGNDIEASYGKLHKLPAEVRIPWHYPAIKPSETLNSADEVETLNAQIQSNVNFLANEPDRIQPNVYKRLWEYRNLGKVTPREFDPNRQERLDFEDAMRKKAYLFEYNERS
Ga0116817_1002947	Ga0116817_10029472	F065664	LQSLIKRAEDIQTSYDKIVIHDYSEFKLNFPKNKVVLIFHGSKLRSMEQTEVEAVKQYPCFVTTSDLLEKLPFATHLPAPCDMELFKPDVQGYGWIAINRSYQRDIVEKRIREKYPDIQYYERNANSIIRYEDMPDFLSQYKDYVDWKFTTDAEPVSLPDPSCTGIQALSLGLTVHDKDGGTLSPHLLLIHDAKRVCERFIDQIT*
Ga0116817_1003070	Ga0116817_10030702	F055777	CDHAEWLCHTCEDSKDPAKFESYQGGGLSPGGVATLLKGVKNSKFIPSELEESDGRVRLLNGNKQDKNQCNLWAINADLYSSDALVNQIVQHNPVFLLPYDHKIKVEQKLDGICYPPIVSLNGRRQISARENHSVIPEEWRNSGPWEERNPTLLCSLLSLKTELFANNNKSNVVAMLVFGSGLCSDISWIPRALRVNGSPITDILFFHNDSNDFRDECLSFPTISDSVRKSYNNYGISRKR*
Ga0116817_1003260	Ga0116817_10032602	F083376	MIRIYTDKQTDNLAESVDLGRVSLGETTKYTMYMKNTDTQWSVHNIKVENTNPELRFEIPDTLKPNEVQEIFVYWTPKLDSREPLLTKFEFSGDVFVG*
Ga0116817_1003647	Ga0116817_10036472	F081298	MLLNKKSLFIPLVLIICSCNTGYQPIQSKSIFIANDVDVRFAELVHKRFFHEIKTEQKIDILDLKYYEKPFFSGIGTRPTNLEIYYDLSYRLGNENKIQNINVKDNVYVNEFNPIAQNNAVSQISYELM
Ga0116817_1004957	Ga0116817_10049572	F101314	YRTLSEKKSQDRKEDRTENPEGSQDQSGFLLFAVK*
Ga0116817_1004981	Ga0116817_10049812	F093745	MHLSKNKKTSFILNTLGIDMLSISEKLDNSVQTYVHCSLRDRILTLHSHSLDEYSERELELLSRIEASVSKENKKNKILELTWDDFLNNHELLNIEIILNFTNIKIDKKNELTPPNLALLIKKP
Ga0116817_1005258	Ga0116817_10052583	F004819	EFYPKEQDPRLDERSARFHARVLKEDLATLPFVLDTCNRDINVARASTYVTWDHDKEMWCEVDHLMMNFYIKARTSETREELEDKINRGVVELLKGPRYYEQAKVYCMIDMDYPEDESIYDIVKVPKNKRKKAGWCIAGNEGDIVYHVTLHVQECNAMDLAVYDEKNRGDFFDLSGNNLESPMADLERIVNGG*
Ga0116817_1005448	Ga0116817_10054481	F057364	ESFVTKLIFTDGNKGQEIQVYAWEADAIEASLKTLPLEAVLGFYNKSGKTTIKEW*
Ga0116817_1006857	Ga0116817_10068572	F045676	MSEREPYPELDCALAMSKARGNLDFLAKRIAEEWHETDTTAQAIQDAHKALVQAQKEYEKVLTLLNNSTNVDV*
Ga0116817_1006857	Ga0116817_10068573	F016795	MTEELETFMTEELGIIDRLGTDPLEGLDLFEDVGGNIWTLDQIIHEFNNK*
Ga0116817_1007182	Ga0116817_10071821	F076169	VKGPILSMPVSWAIKVVPQIKVHNKALNNDMDLLIFN*
Ga0116817_1008149	Ga0116817_10081492	F077772	MTEDSSGPQISGEPTVINFNSGPQVMGGQMQSTNAVAGLVLAILGLLTLLGGASALCCGPSLCFTIPAMFLVSTDKKNIGGTYHPDSGMINASNVINILSLIGALLGIGLYVVFFLLIGIDSGAF*
Ga0116817_1008784	Ga0116817_10087842	F003637	MAKVISEYTIEAPVVGDEPKMVEIKIMRTMKDGSGNDVEVVDYTETKPVDEAISQCEAHKANLQAQLTECDAELADYIAIRDA*
Ga0116817_1010014	Ga0116817_10100142	F040846	MERFGPAFFMRPAYCTDCNKKPIKVKDADLEKHVRAGMNPEDPICPECYWVMNVSSWERFRGGFLDGSFTVEQFEKWERKTYMNENFVSETLNQKN*
Ga0116817_1012602	Ga0116817_10126023	F008029	LNLVGLKELSELLDVSYDTLKVWKNRDRLPEPFQVISGTPVWDWDESEEDFRSIQKNENSGRPRKPKISIAGGLIEIDLNENKKDKEGNASIRVMGKSFVDIQTESAEPNSKSKNVSIRVLGKKVVDINTDDFIEVDGEDKSSENS*
Ga0116817_1013832	Ga0116817_10138322	F049683	MLLVNNVFIIFLLKFACEGTMYLIKKEELSGTALWLKENFEAIFLWFCVICIVVSALFILKLYLNRQK*
Ga0116817_1014517	Ga0116817_10145174	F063590	LKIDILQEITDWGDEKVANGIYHVNENGHLVQHNDKIFKNPLKGFSKARRKFKKIGERHG
Ga0116817_1014676	Ga0116817_10146761	F044326	MIKVAVILFILIGMAYAAMQLVDKIEEDEGKFQVAIDEATKQAIEKGEFQFPEEIIPIESKDCEGTQWIKQRECSLNGKPMDGTEGSCGPGKEIWILDPNHRDFKPATGDGKCEPQERDCSVECPKPCEGDTWKDTGRCVRKEYDTRGNVKEVVLDGTEGKCGEGITELNLDTTAPDYKPAVGKGECPMTKGGYCNVPCPKPEPPKCNSYTGWVENVGLGGVRSKDDDRKVRCGQKGGKMFLNVATEA
Ga0116817_1016161	Ga0116817_10161612	F003637	MAKVIAEKVQEQVQVDSPKMVEIKHTRTMKDASGNDVEVVDYTDVKSVDEAISQCEAHKANLEAQLTECEVELAEYIAIRDAE*
Ga0116817_1018620	Ga0116817_10186203	F052634	MKLVKNEGNLLMNFENAIDKVAEFHNVNKDDIEEYFDNELKEQLGE*
Ga0116817_1018671	Ga0116817_10186712	F032678	RLLDRDVLIDTIGDKTLEKLIKPHMGGYACHPFTYVQKDWIVAQFKKLGIMDLFNLTRSCEGDRDTYPEIFGDLDYKTYVPGSPVPVCGKCFWCKERQWGEDQCKD*
Ga0116817_1019873	Ga0116817_10198731	F003440	YKWTHKNTNMERLWIQREVGIDLFKTVEQNDWEWTLLRTGSRTLPSDVYCRCDIYVEIPDSKQGTFFAIKFPQAKAIPLAK*
Ga0116817_1020864	Ga0116817_10208643	F042385	MRKLVYKITEDTDTSQYISHIEFITDRTSEWTEEQYMRNRDPRITKMELVSNEETQEKEPTSRKAKLG*
Ga0116817_1021187	Ga0116817_10211871	F037175	MINFHTNDINERFVKSTVWNTLAHLKVYNIGRWLKKWDIHVWDLKDTNPQFFEHIKTTSGQKINPNMPSGVTGKFRMDLYLHDSRNVFKLRENSDRIQHEICHALLIGTPHFVSGVHDNIDNRFTVNYWYWDRFKYTKFTLSIIDIRKYL*
Ga0116817_1021470	Ga0116817_10214703	F034541	MNKAVEAMAWEELESMYNMYHANGNGGGMRVKDIQILHSVEDEMAWRREQGYVDLLPREIEIELLEQGKIRERYL*
Ga0116817_1021492	Ga0116817_10214922	F070146	YRTRDEEAFEKGKELVEKFVADLDFVPSDSEYYVIDDPMQITLGEYEDTGKFPGMNSLVLQLEKLGFYTKSASYRTAEYRPEFARAFNRAVSDEGNTNRDGSIDWNFVDADLYGAEHRPNCDKEYYAQYESLAIQYDLSNGVIA*
Ga0116817_1024731	Ga0116817_10247313	F065241	MNDMSYTFEQFEKDKETLLNLIADCEELEMKENGDEFFIQCDEFNQNNY
Ga0116817_1026177	Ga0116817_10261772	F031448	SGLELWGRKGWKKMLPDWESNYIVFTKNLKERMQ*
Ga0116817_1026463	Ga0116817_10264631	F030441	MNNRKDNMVEIDTKKLLSPFPQHLVRSAPAGKFGDYVPHANYVERLRDSGVLYSWTCEPVYGTHNGEKRIVGAKGTITIEGMGSYDGFG
Ga0116817_1027244	Ga0116817_10272442	F048843	MNSKNKKDKYFVFSVPTAFVYEIQAETEEEAREILVEEGGLSIFGEQCDMTSEDYAQADLEQVYEM*
Ga0116817_1027657	Ga0116817_10276572	F085235	AGIEIVEDKPVCRERGSKYAGFTFSIPSTQTIEIVICTEVLKEHFSGARAIMEINRTVDHEALHAAQFCKNDYSPGSVSDDYTTDNELEAQSYEDRPQAVGEKIIEFCF*
Ga0116817_1027922	Ga0116817_10279221	F091894	GLYAWRKSDGKLFMDEDNNLLNIPSKQFDLDKMAQITKAAAHYGEPEGKPVFIPGVQRTTEEDYTEQVERMKAGLLPTMNDFNAVTDAKKAAGIQDG*
Ga0116817_1029119	Ga0116817_10291191	F023489	EFVEGDTTSSRCGCGANATKIASATQHVLEGSSGDFPGRHMKWVREHEKAGQSKRES*
Ga0116817_1030053	Ga0116817_10300532	F057364	MLWTRGIMVKVEREDFEESFVTTLIFTDGNEGQEIQVYAWEADAIEASLKTLPLEAVL
Ga0116817_1030082	Ga0116817_10300822	F025320	VLTRSHPTDPNTERHYNGKKITAVTVDFAVNGTDFSSTELGAEGALNAAIKVLTQQANPIIQSDLEADGGGNAGQVFQLYYEGEFGTDTYDGTNSETFAAYLQTELRLLTSVGAGSVNLSSATVGAQAL*
Ga0116817_1030525	Ga0116817_10305252	F029710	VDHEDLWSAPIMWLDDESEYDLFPTQDLSIDWVEEMDKEGAPIIDGDSLGRDICIEVSSPSKGWNKRRAVAYNIDFDWT*
Ga0116817_1030958	Ga0116817_10309581	F046080	MTRSIALGMLSVGNTGDEILQILDVISADIESEKTMNEIAEILF
Ga0116817_1031218	Ga0116817_10312182	F093970	MKVFLSNLNSDLKFFNSNKTISGIMARKPTKNLTALNVKGPILSMPVSWAMKVVPQIKVHNKALNNDMDLLIFN*
Ga0116817_1033655	Ga0116817_10336552	F032304	MKHSESGKLKVFKQLRKCPEITEIKQTAKGHMILAENGEQFLVHLSARAFHPLRRWLKANTSLKSLKF*
Ga0116817_1033955	Ga0116817_10339551	F062791	VFVRDIDQNADAKVAKGIYMEMGYDFGPPSYHLKIDKVA*
Ga0116817_1034808	Ga0116817_10348081	F052625	PEVALLLDTWDTIKSFIPAKERLHVAEEVIRTFDDNVSISEVEDHLNEFDTVMKAAIVSHFDIGLDDGEDDEDWEY*
Ga0116817_1035046	Ga0116817_10350462	F026855	MRKESKMGNWNVEVEGRFTAVIEVEADGPTEAEENAIQVFEQDYDVVASMGAESWDYTGICGVEEAD*
Ga0116817_1036354	Ga0116817_10363541	F008747	MAPVDEFNESPAGSEGETDQEVTGPPLVVGVTVVIAVPLVKVNVFGL*
Ga0116817_1036354	Ga0116817_10363542	F008747	MAPVDESRERPAGSDGETAHEVMAPPLAVGVTVVIAVPLVRLKEFGL*
Ga0116817_1037032	Ga0116817_10370322	F043607	MEEKYIKFYKTFHKKFKNDKNLIHCFELLSDGGVEQNRELKKILYEQF*
Ga0116817_1039028	Ga0116817_10390282	F036279	YIITMKGTRHSLKTLFILFSFVGLQACSVPFANGVTGKDIIKIANAGKNIKNITKQGATEELITETKNILRDIQHGGKVQR*
Ga0116817_1040829	Ga0116817_10408292	F083376	TESLDLGRVLLGETKKYTMYMKNTDTEWAVHNIKFENTNPELRFEYPQSMEANEVKELNIYWTPKLDSRKPLRTEFKYSGDIYIG*
Ga0116817_1042134	Ga0116817_10421341	F012018	MRKLVVVTAIFFSGLAVAQGLPRFGTAKFGEAAFGVAEPALPVPFMPLWATITLAVALWVMAYLMRSKES*
Ga0116817_1043225	Ga0116817_10432251	F089019	ISAAPSLMSTSVNQIESYFDTKTLDINSVATDAVITGVSFTIENNVSRVGRAADGDAENYAFGIPSVNITGEISLMYDDNFNDGSDNVLQDFLDGDTATLTLKQSTDGTVSTAGEMSIIAEIYSTAVNYDLNADTGAIITIPFKVVQPTSSGEANGTAFEFIHCDGISNSSW*
Ga0116817_1044957	Ga0116817_10449573	F025996	RTVYDYATGDGLMTPQLEMNIGELDKSIIALSKRKLKLLQEVQQINMDIAFLRKQQEQLTNV*
Ga0116817_1045716	Ga0116817_10457161	F030122	MEFYPKDKDPRLDERSARFHARVLKEDLATLPFVLNTCNRDINVARASTYVTWDHDKEMWCEVDHLMMNFYIQART
Ga0116817_1046121	Ga0116817_10461212	F017831	ECKQTVPNSMLQYADLYVEFFDYENIDTAVRIGRCESRGKSSAYRKDNGDTGVMQFVSWTWNWVAEKYELPMWNEWVIMRFGRPYTEDKVYTNDIGFEQIKVQYTPYYNILFASILAEDIYGRTQWRDWSSSEWCWEDEKKWRNKWLNE*
Ga0116817_1046655	Ga0116817_10466552	F040645	LKNIGIRTKIIIITLIILSGGFFIAPEILEEVAETRYRGTLEDGRQKLVERLEKDYEKINLRNTPRIGDYFVFVYDRESGKLIREYSFFPPRLIDDFDAKKNKFSINNNEFDFVKTESLDGKVSIVVGFNESTPRNIVEGISRFF
Ga0116817_1046852	Ga0116817_10468521	F095423	MRINNFTSNKALLVFSGLFFAFSISADPFLHDDSAEENSIECHICSNDVTESTIEINKIDGITKELSRNISATSLL
Ga0116817_1052978	Ga0116817_10529783	F028516	IIMNLYQKLKPEIKHRLHRNSNKYAVSVNGIIDRLKTTRYYNELTIGDIKQIRAFGDVTSTDILWPDTMFNSKI*
Ga0116817_1053383	Ga0116817_10533832	F030000	RVVVAGEHPLGVESVEHVSIENRQILRRAWDEAPELASHFADRHGLDYDDAVICLVDSLVKEAFQARDRVEEARFVFEFIAQAVYRLVIADSDSSESS*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300013252: Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station6_GOM_Metagenome

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences