Sample 3300012784

Basic Information
IMG/M Taxon OID	3300012784 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0126301 \| Gp0177762 \| Ga0157523
Sample Name	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES001 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES001 metaT (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	36164620
Sequencing Scaffolds	37
Novel Protein Genes	43
Associated Families	34

Dataset Contents

Total Genome Size

36164620

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	20
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	3
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	1
All Organisms → cellular organisms → Eukaryota	4
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Cucurbitales → Cucurbitaceae → Benincaseae → Cucumis → Cucumis melo → Cucumis melo subsp. agrestis → Cucumis melo var. makuwa	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Cucurbitales → Cucurbitaceae → Benincaseae → Cucumis → Cucumis melo → Cucumis melo subsp. agrestis → Cucumis melo var. makuwa

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Eukaryota → Sar

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa

Ecosystem Assignment (GOLD)

Name

Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → oligotrophic lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater lake biome → oligotrophic lake → lake water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Wisconsin
Coordinates	Lat. (^o)	46.008	Long. (^o)	-89.701	Alt. (m)	N/A	Depth (m)	4
Location on Map

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Location Information

Location

USA: Wisconsin

Coordinates

Lat. (^o)

46.008

Long. (^o)

-89.701

Alt. (m)

N/A

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000237	Metagenome / Metatranscriptome	1498	Y
F001926	Metagenome / Metatranscriptome	616	Y
F004760	Metagenome / Metatranscriptome	424	N
F004777	Metagenome / Metatranscriptome	423	Y
F006495	Metagenome / Metatranscriptome	371	Y
F007736	Metagenome / Metatranscriptome	345	Y
F007746	Metagenome / Metatranscriptome	345	Y
F007922	Metagenome / Metatranscriptome	342	Y
F008473	Metagenome / Metatranscriptome	332	Y
F008512	Metagenome / Metatranscriptome	332	Y
F009395	Metagenome / Metatranscriptome	318	N
F014475	Metagenome / Metatranscriptome	262	Y
F015066	Metagenome / Metatranscriptome	257	Y
F016362	Metagenome / Metatranscriptome	247	Y
F016926	Metagenome / Metatranscriptome	243	Y
F018379	Metagenome / Metatranscriptome	235	Y
F023359	Metagenome / Metatranscriptome	210	N
F027998	Metagenome / Metatranscriptome	193	Y
F032134	Metagenome / Metatranscriptome	180	Y
F037232	Metagenome / Metatranscriptome	168	Y
F039008	Metagenome / Metatranscriptome	164	N
F039655	Metagenome / Metatranscriptome	163	Y
F043744	Metagenome / Metatranscriptome	155	Y
F047041	Metagenome / Metatranscriptome	150	Y
F058728	Metagenome / Metatranscriptome	134	N
F065812	Metagenome / Metatranscriptome	127	Y
F066724	Metagenome / Metatranscriptome	126	N
F073598	Metagenome / Metatranscriptome	120	N
F077376	Metagenome / Metatranscriptome	117	Y
F079587	Metagenome / Metatranscriptome	115	N
F083748	Metagenome / Metatranscriptome	112	N
F091401	Metagenome / Metatranscriptome	107	N
F098503	Metagenome / Metatranscriptome	103	Y
F102393	Metagenome / Metatranscriptome	101	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0157523_104617	Not Available	526	Open in IMG/M
Ga0157523_105373	Not Available	700	Open in IMG/M
Ga0157523_105752	Not Available	594	Open in IMG/M
Ga0157523_108391	Not Available	709	Open in IMG/M
Ga0157523_110557	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	765	Open in IMG/M
Ga0157523_112564	Not Available	534	Open in IMG/M
Ga0157523_119381	Not Available	590	Open in IMG/M
Ga0157523_120589	Not Available	532	Open in IMG/M
Ga0157523_121559	Not Available	592	Open in IMG/M
Ga0157523_122336	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	584	Open in IMG/M
Ga0157523_122546	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	983	Open in IMG/M
Ga0157523_125772	Not Available	1648	Open in IMG/M
Ga0157523_128398	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → unclassified Perkinsus → Perkinsus sp. BL_2016	596	Open in IMG/M
Ga0157523_128767	All Organisms → cellular organisms → Eukaryota	1010	Open in IMG/M
Ga0157523_129210	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Cucurbitales → Cucurbitaceae → Benincaseae → Cucumis → Cucumis melo → Cucumis melo subsp. agrestis → Cucumis melo var. makuwa	755	Open in IMG/M
Ga0157523_130518	All Organisms → cellular organisms → Eukaryota	598	Open in IMG/M
Ga0157523_131209	Not Available	613	Open in IMG/M
Ga0157523_133433	Not Available	892	Open in IMG/M
Ga0157523_134240	Not Available	804	Open in IMG/M
Ga0157523_137790	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
Ga0157523_144115	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1209	Open in IMG/M
Ga0157523_144316	All Organisms → cellular organisms → Eukaryota	557	Open in IMG/M
Ga0157523_144553	Not Available	505	Open in IMG/M
Ga0157523_147839	Not Available	1091	Open in IMG/M
Ga0157523_149803	Not Available	626	Open in IMG/M
Ga0157523_149982	All Organisms → cellular organisms → Eukaryota → Sar	1134	Open in IMG/M
Ga0157523_152112	All Organisms → cellular organisms → Eukaryota	608	Open in IMG/M
Ga0157523_152264	Not Available	1245	Open in IMG/M
Ga0157523_152473	Not Available	558	Open in IMG/M
Ga0157523_153307	Not Available	857	Open in IMG/M
Ga0157523_153497	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales	714	Open in IMG/M
Ga0157523_158212	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	795	Open in IMG/M
Ga0157523_160119	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Coccolithales → Coccolithaceae → Coccolithus → Coccolithus braarudii	576	Open in IMG/M
Ga0157523_160417	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	502	Open in IMG/M
Ga0157523_165070	Not Available	613	Open in IMG/M
Ga0157523_167823	Not Available	792	Open in IMG/M
Ga0157523_169238	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	738	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0157523_100033	Ga0157523_1000331	F000237	MVLHYFTPYYLYLVKLHVMFCHESDSDSGENVYEDKSGSYVSFYDAFLKEIQDAYTLYVFLYFFIHHFDGGPVNYYFFERNISELDEIRFYGVAPHYFRPLMGLLVVSPSHYEGLMMGLFVLLASLPIIYNLYNSNNSYLPIIPMQSSMLQTIFFILFMLSMYCTASMLPCGRYYYAPEGGYVGNPVKFSYQYAYLYMA*IV
Ga0157523_104617	Ga0157523_1046171	F018379	HNRVLPRSYGTKREKEMKTCLIAIVGTASIVASADAGFLGFVASVRTVGANTVIDLYAGVDNASDKFLNVYNANISTTLAGGFVQKAGLATKTWKPDTAGFTSTRNTIDDSFMTAGTFGGGVYGGEFYASSNTNGDPNFTGTSWNATPASPAATTVPANAGWYTGDPTSVDNRAE
Ga0157523_105373	Ga0157523_1053732	F004760	MPVYQYEDSRNGKVVELEKAVAERDSVPRYLKRFTVPQRLSLVGVGEPLDNPLGVNQTNLLKGYYRQEQKLGSRFKSNFTPDSIKRAAIRRKIK*
Ga0157523_105752	Ga0157523_1057521	F083748	CKAAESEVQSLAAALAQMSSPSKLVYHVGKELLVNGKDILALVEGAVTQYKAGAYEGFGKDLGAIVADLVGKPIAPPSVGATVGDDAEAKLIFQGVLEGFVSKELPDVMACVHDSTTTVADFKAAVADFETKTIDGIAKGLRETADGLTALKAAMADCKAAESEVQSLAAALAQMSSPSKLVYHVGKELLVNGKDIL
Ga0157523_108391	Ga0157523_1083911	F016926	PPANISSMMLVPLALVVIVGTASAQNYGNNVPARNYGEKYNQFGSVPSQWTHENGFSNYWILPAGSVWQCKGDTNGPYGIVAGAREFANCVRGVQDWPDLWNKMNSNSHSMDFDDWRTICDCWGDTLDDPTFSSPDKRHFADCFLDAVGGCGDGSAAARQRLENQERAFLGIVLRTMGQADATNPTVLTTRTTLLINLLATPAPVDVPGKSCRYTEPSCVTVPPTPSPTQPPSTCT
Ga0157523_110557	Ga0157523_1105571	F008473	KLAFEYMKQRVEMLSKRGLTDGFRRIDDDHKGSLTAEELKRFFMEEAHCPWFINDRTLWCLCDFADLNNDDEIGFLELSQVLLCQDIIQFAALVPNKKKEAQAEKDNSMKIGSRGCTVAQVREAQRECCNALINRGSGDLRQNNVRSVLAYLDVREDGMITRDEFFEKMKLLKVLKHMTSEKKVKGTIEKAALETMLDIVDEVARKIEEQMPGDQGGAVAAGYLNLAAFAKGCFSTDGFGGFVDVMTIAGIQ*
Ga0157523_112564	Ga0157523_1125641	F039655	FRAILLVAAVGLASAYTCVNDPSTLFVNTTCIVSAPGGFSPGKTISIELAGTTTKQLLAGVFKYQVYEDYVPSFVASGNIAYFNCTQNGCNLNQPIALTLANINAVPTGFTASIPVTIPQPQKTGSYKITYWGEDQDHYPYDITGTLSLVQSCVTTADCPPNSYCKNGPGQSPPYSC
Ga0157523_119381	Ga0157523_1193812	F091401	LFVAHTLYFFDGFRNKILFFIGITALRTILIISLLVVVVAETIAFLAFLGISDKIAKDSPNCLSGPCQKFADTVTTQLGQNDLAISGGNVAVSLQQIATWGPTAGWYLVLATIPLTVLATIIVVINRFPIPVDSLGTGEAL*
Ga0157523_120589	Ga0157523_1205891	F009395	KPKLFFKNIGKYAATSTYIHVRIPFNFTTVFNTKQAIAGVYDQLLAQHDEPFKSITKSVTDVSLSIIEGSLEEFRDIIKALPQKTEISTPGRPKRFIAIGISIAAMAMSTFNTVRITQLNEEISTLKEKTDLILDVVHLHEKHLHHIEEKLEQTNKLLADLLEANVWFTSKVTDAI
Ga0157523_121014	Ga0157523_1210141	F066724	SNLFWEPQGDQSFYSTSGAGSTISSSSGQVGLPRKKIRIEEVIDSDPQPESVSSNQASQPNQTGKACATGVGSTQVRRDESFAKLSRKAQLYETAKDRFQRCLIHHNQHFHESLSEADFIKKAEGKPVSESGEVSKRKRKNLARLERRKAKALAEQLMTGSVETSVPTVQP
Ga0157523_121559	Ga0157523_1215591	F007922	GLYGFPLWEAEVHDLLHANFRELASIFRSYCKSVGEASSDDSSKTMDLEEFNDFVIDCMLETNFGQAYTFENMKEQFSRADKSGKGLAGPQANAELVLYEFLNVITRISFWRINPECGELEMDHQDTILPVPQCLEKTLRECILPKAHRDDAGQFRGTVMQMPEVQASLAEGRPRLQAWYATIPLDDNQKVGITQWV
Ga0157523_122336	Ga0157523_1223361	F098503	RISFLRANPKHGQYDNKAKLIELPGCLKKMLEEVLIPNAKQDMSSLFREEIAQDAEVQRVFDEYREKLTYYYNEVNQLTALKGKADNKLSMETWMDICRGYLHFAKRKGLKHMEKSKTSGKAGEGGGLGEGAFVGDCTVSRESDITGDERCKEKFTCRLSTLEAKFAFLNSQSLEQMTAGDSSDTDLMATLDFD
Ga0157523_122546	Ga0157523_1225461	F043744	HPLFKELQLIFLAYTRSISEDSAEDAMEMSMDEFHDFVVDVGLETKQYKFDVMCNQFIKANATNSAQVRAQRQDEKRDAQSRGNDEPQWKKKPAAKLKGTSSGEEAKKDQELVLYEFLNMLVRIAFWRANPTFGNFVDKDKDGKKDKEEPTPVAYALSNMLNEIILPRAKRENSAAFRQKEMQDSKLIAVLDSYKPKLKEWYDKKVSDDSEGPRNGIISDKLGFEEWNRVLDRQDIVGEWEIEQMSEITGDESTKGNIKVRLSIPTCKAAFMDSQNAEQLGVGQADSTSEQAVLDFDEWLECIARIACSKYSAIKQMDPAAKVKAFP
Ga0157523_125772	Ga0157523_1257721	F007746	GDKQINRFPRRVRIHGGEFGESARAIHRNESEESGSSRIGEIPRFD*
Ga0157523_127924	Ga0157523_1279241	F000237	YYLYLVQLHVMFCHESDSDSGESIYEDKSGSYISFYDAFLKEIQDAYTLFVFVYFLHHFNGSTVNYFFFERNISELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMALFFVLLTFLPIIYNYNVYNKHVPTIPMQNSLIQTFAFIIFMMSLYCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYMAFVHHLDLIDHYIFQFFQ
Ga0157523_128398	Ga0157523_1283982	F023359	IVLVVSFVLTVLLTLFQLDRVRNWFIFSIGMSFTRIAITILAGLVLLSAVIAFLSFLGLPSAFKEEIPNCVDGPCREFSNSLKSPDLIEVQNSVSYSLVNTRAWGPVEGWFIVLGIIPVSVVLLALIVLNKFPLPIDSEASSGEAL*
Ga0157523_128767	Ga0157523_1287671	F004777	LWTSATTLACRSNAVADIFWSATVTVASVTGTGRPIFSFDAAVLSEIDQNAPHSGYASLTVSGLNFGVSEHTATAGIENGGGGDLGVCFTSSWTSATTLACLSDPFGDIFRAASVTVAAVSGTGRPIFSFDAAVVSLIDQNAPPSGYASLTVSGLDFAVSDQTATAALERGGVGDRGVCFTSSWTSATTLACRSNPFGDVFQAASVTVASVSGT
Ga0157523_129210	Ga0157523_1292102	F073598	QGNSENIIFAIKESVPGCKGPGTKGKQPRSITKVLKKKLSEKKASFIVTAKRWAWKQPSLRESVIAHWSN*
Ga0157523_130518	Ga0157523_1305181	F065812	MGDKLLLKLNIYGKPIVSRYGEGKMKRNLKRGLKDLKALKRKQ*
Ga0157523_131209	Ga0157523_1312091	F016362	VSSAESSVRCSYSEVRQTVEISMQPVPPSFQPQQPLTLPGVPVTSAGIPITIPGQTTFEAGQPIVTPQQPLQIRLPDQQVPRQVAVQPQQLPQPVIVQVATTPVPIQSSGISSTNMGTDLSNLLNLPVQAVQMVAIATPAPSQVFTTVFDTVPGGFSYQPQPPITTQGAMITRVGAAQVLPGQPIITARDALTIPQQP
Ga0157523_133433	Ga0157523_1334331	F016926	MMLVPLALVVIVGTASAQVNYGNNERRDYSAKLLRDGIQTSLWTAETGNANYWALPQGSVWQCKGDNNGPYGILAGAREFAKCVSGVSDWTDFFNKLGSPTVTTDFDDWRAICDCWGDTTDDPLFNSPNKRHFADCFLDAVGGCGDGSATAKARLDAQERAFLTVVLRTIGQAGDTQAVLTQRQTLLINLLASQQQFDTVGVHCRFIEPACVTASPTIFTTPAPVQPMCPCESYAISCTNTPCPTNSCGDAGVASRTCVCQKSSGGRVVGQADCCYCSGQGESCGSTP
Ga0157523_134240	Ga0157523_1342401	F008512	LLLCISTVRTALAGANKIESAQRKTPKGGQKERTHREDHGNSAGSVKNFQAPAMLKTTPLDCEIKGNLREKRRDPWFGANAPPKAVADPEPVVKTRMKFAGVS*
Ga0157523_135804	Ga0157523_1358041	F032134	PGVQAETMFGNTYGHSSHMAIEGSHDRFQWREMPPEKRFESTQKFSYINFGHPAKIEDGHITYEHVYTNPANANYKQVKPPILGEHKSHIPGYGGFIPGVQAKNMYGSSQFETTKLALANHVEHMKEYSEKKPKTAPAGNPETVGLGMLQFKPNGFLYTKKMQGDWNNGMLGSRNYSAVRLSEGRHWKGNLYVTNNQ
Ga0157523_137790	Ga0157523_1377901	F027998	NFLDLYYPRRILSDELTNTKAAEIGITTIITARKTLLRNALNEGVI*
Ga0157523_144115	Ga0157523_1441151	F102393	MILCCKPSKFNVICWSFLTLLSACVILACAVTALDASKGFKDATMCILTNMVDLTNSDITGGNMTDVPVKLDPRVLNVASAVIDWWMYAMIAPGAAYFVILVIAVFFSCVAALCSKCCASVTSKAFIFLGWFVAVVTLAFFCVCAVLGIFTQIPMTEAFWIENVESPCNTSVVESTNQFNLANASAQDCVRLYGQSNCASSTQQLNDAAEQLTKFTLLCSCASAWLYKSKPLAAPGVVGALATLLAYFLSIGTCCTLVCCFSFTAAMEKNAPKKEKDKNFTGAKDMELVRH*
Ga0157523_144316	Ga0157523_1443161	F004777	VSSPASQVTTWVTVGSVAGTVNGAFSFDAAVVSDARLNAPLSGYASVTVSGLHFNLVDLTATAGLERGGLGDLGVCLTSSWTSATTLACRSNAAFVDVFRAASMTVASVTGTGKGVFSFDAAVVSNAQLNSPHSGYASLTVSGLDFGVVEQSATSGLEQGGSGYLGVCFTSSWTSATTLVCQSNA
Ga0157523_144553	Ga0157523_1445531	F016362	PPSFQPQQPLTSAGTPINIPGQTTFEAGQPIVTPQQPVAIPLPDRQVPRQVAVQPQQLPQPVIAQVATTPVPVQNTGIASTNLGTDLSNLFNLPVQAVQMVAVATPAPSQVYMTVFDTVPGGVSYQPQPPITSPGALITRVGAQQVLPGQPIISAGQPVLQQQAAVAI
Ga0157523_147839	Ga0157523_1478391	F058728	AMGERCFGLPLMVGARTYTTCGLLWVALSLVGIDRPQAHAHIAPSSTCTFHVMPQVESVPSSVRGRLTSYRRSDGCSDSALPASLRRSLHRPHTIITHLGGGVMTSSREGLFESPDKARLNQPSRRTNILRLALVHTFRRHERGRADACAIRAGRKPVAQSGDSHMSARPQFGLNFIVFISHLRVPFLALPDGRVPAAAHTKLPQGWSYSPAGPSDRVTPWLADAGLLSNGDLTTRLARPPSAVPLFSSKLNKLYAAVAFLNPEVSWLVVVLSPLLHSPLEPALLTQFAGAGVSLATSGPIPRSADCANVLSNVYKFFLQLPPGLTFRDCASLRHLRVPVKLGWPRPGPPSGRGGG*
Ga0157523_149803	Ga0157523_1498031	F016362	RDEVYTVTDTSLQPVPPSFQPQQPLTSAGIPITIPGQPTFEAGQPIVTPQQPLQIPLQPRTEFRPVTVQQQTPQPVFVQASTPVPLQNTGVASTNMGLDLSNLANLPIQVATPAPSQLFTMEAYTVPGGFSFQPQPPITTAGAMITRVGAAQVLPGQPIITARDALTIPQQPIAVQVPRQATRQVPACQTITEPCVRPVCITYSCDCQ
Ga0157523_149982	Ga0157523_1499821	F001926	VRHEDIPEINNPKIRFPVLEGDKLMKEVLNGGYNVHPVPPPNSEIIERIRRRYERKRIKIEKLLTLGYTTS
Ga0157523_152112	Ga0157523_1521121	F014475	GTADGMVINGFTLGTNDGLDVGYTLGRSDESEVGTIDGASLGSSVSKTVGSRVGKVLGTIDG*
Ga0157523_152112	Ga0157523_1521122	F014475	MVTNGFTLGTNDGLDVGYTLGSSDESEVGTIDGAPLGSSVSKTVGSRVGKVLGTIDG*
Ga0157523_152264	Ga0157523_1522641	F077376	MTTYVLSLTGDEEKAANATHWARFRKAKLISVARRAGERAAGQDSIVITEQGAHDANPSERSPYTRDAGALAALLVRTLDIQDGTGVVLADFDSDEFAEDVVARIAALGRAVTCTSRVSRFSFAASVLPRLARA*
Ga0157523_152473	Ga0157523_1524731	F016362	ATGAMTPTDSSRCTRDEVYTVTDTSLQPVPPSFQPQQPLTSAGIPITIQGQTTFEAGQPIVTPQQPLQIQLPPTTAFRQVAVQQQLPQQQVIVQQAVTTPVPVSNTGAASTNMGIDFTNMNVVVQAVAMQPVVTPAPSQLFTTEAYTVPGGVSFQPQPPITSAGPMITRVGAAQVLPGQPIITAR
Ga0157523_153307	Ga0157523_1533072	F018379	MKTAAAIAIVGTASLVASADAGFLGFVASVRTVGANTVIDIFAGVENASDKFLNVYNANISTTLAGGFVQKAGLATKTWKPDTAGFTSTRNTLDDSFMTAGTFSGGSYGGEFYASSQTNGDPNFTGSSWNATPASPAATTVPANAGWYTGD
Ga0157523_153497	Ga0157523_1534971	F006495	TKASQQRPNMARVAYGATSAADDDDDIRFGSMGYTTELSEDYVTTAQYMARDLDDPYAYEKKPIHYIPGYTGHLPLNRERFGVNYREASAATIAMQKSKGVHHPVTDLSAPAPNYFGKTAIKKLNRSQKFIAADQVAQEEATTNQQKYGHPHAQAPFGVFPVGTAPGAMDYTATSSKVCPNNQADDPSSLASRIAHRRVARIKRNLNGGLFRPDPYDDSVVDDIASLDPRLKILQTR
Ga0157523_158212	Ga0157523_1582121	F015066	DTTVTFQEDDVVKFAGAGKLDLELVDRSDPSFLDLYLRELAASYAQKTDAYASKIAADGSADSSSSTIYKAIAKSIADSYAIMRQTPNNLLVATSGGNDDVDFAGLLGAVDTTGRPLYAAAASQNANGLITQGSTNGTVAGLNLVVDPNYAGGTSAIKVGLVYPTMAMRFHESGTLQIRANVVANGQLEIGIYGYVAVVNRYPTAFRAVQVA*
Ga0157523_159368	Ga0157523_1593681	F079587	HERAHAINPIVSQSTMLSTLALATMIPTAFISIDTSPFFYNDLMAVQAMMRPPPSSSWRCTDEECMMSYPVSHLEDASLRLVLGDDGKTITLSGERKIEGCQCQPRDDVIITLPFTPSAPEALSSSIDKGRLTITLSKHAKIPEAKTILIKRQEPKTADASQIRFVPQESASASVVEEKMLDAFDKFRAVAALARKDGQETPAQASNASETVNVTAQA*
Ga0157523_160119	Ga0157523_1601191	F037232	RGIMGAFKIFDVVSTVYGTGYISEVRSDCYLVLLTHWALAQGQSPKCFLQEDSIRLIPGALPGSTVKTFCGSAQIKQIRSTDAVHIARPINWKLANDSTATLYLAPEAVQLTQTAGFHEGDEVMTVYGQGFIESKREIQGDYVVKLRHWALAQGQSPTCYLQPSSLVKIPGFSVGAVAKTVWGLVRVLGIRR
Ga0157523_160417	Ga0157523_1604171	F047041	VPGNATTPNAPPFATPFANPPNATLHAKNPETLFAMLNAKSPTVKSNAPIRLVKLKTAPNVLPFADNPTVLLTARPPNPNVKLFVKNPDVTGNATNPNAPNLNVNWFVKTPPADPKLNAANVTVMELLWPMLCSSKKPNKI
Ga0157523_165070	Ga0157523_1650701	F039008	VPGPAMPGQTVTVNQLQPVNVPTPVYVPITQAPTMGFVPVTYGCVQAGTTACTAPSNCGSGFLTVTFQCRSSTGQDVPVQLCPGSCPAQQQTCQLAACPVVAAQPLFVPGQPNTNVCPFGSTRILDEATCRAAAVARGNTFQQVETQAQYPAGCQTFQNANQAPTVYLNLHPTGASDANSIPLCRAGVRRSQHSAPELPQGPST
Ga0157523_167823	Ga0157523_1678231	F016926	PPANISSMMLVPLALVVIVGTASAQVNYTYGNNDRRDYSAKFAQFFNVPSQWTHENGFSNYWALPLGSVWQCKGDLNGPFGIVAGAREFMKCVSGVSDWTDFFNKLASPTLYADYDDWRAVCDCWGDTLDDPTFTSPNKRHFADCFLDAVGGCGDGGFAARTKLDQQERNFLGLVLRTLGLADATNPTLYNQRQTLMINLLANPQPVDVPGMHCRFTEPACVVVVPTPSPTQPMCPCVEYRESCQTTPCSQQTATCGVSQARAG
Ga0157523_169238	Ga0157523_1692381	F007736	CTQGSDIVGDDRVGTEFKCRLSVPQAKAAFVNAQKETGGSVEDVSLDFDELLECIARCGVDKYRAVEQIKTGEKVAAMIANILGDLNEEQVITAATYITAERFSPGTSPPKGVAAENHKEWLTTWELLQLSTLPGFPLWEKEVYDLLALHLVELQSIFKAYASSSLQGSATDMDMEEFHDFVIEAGLITDLYGFDAMSGQFTKANAGSNDTVLELHEFLTMLVRISFFRANPQYGMRKGKDQKNA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300012784: Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES001 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences