Sample 3300010912

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300010912

3300010912: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample LVWS6_30_TP1_13L

Overview

Basic Information
IMG/M Taxon OID	3300010912 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111355 \| Gp0156033 \| Ga0137523
Sample Name	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample LVWS6_30_TP1_13L
Sequencing Status	Permanent Draft
Sequencing Center	Marine Biological Laboratory
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	1510079
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Marker 33, Axial Seamount, Northeast Pacific Ocean
Coordinates	Lat. (^o)	45.9332	Long. (^o)	-129.982268	Alt. (m)	N/A	Depth (m)	1516
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F068773	Metagenome / Metatranscriptome	124	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0137523_11823	Not Available	514	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0137523_11823	Ga0137523_118231	F068773	MSNELNLNDLGLGDNSQSAINEKMPRRGAEGRGQSRESRKSLSEHDTARKPERVPMYAQRTMIDTTLIPEGFHGHWVSNNPAGRIDMLLRAGYDFVTKDQNVYSSHVTENGVDSRVSKSGSDGVTLYLMIIPLEL

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