Sample 3300009589

3300009589: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B SIP RNA (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300009589 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118679 \| Gp0138710 \| Ga0116233
Sample Name	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B SIP RNA (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	194439235
Sequencing Scaffolds	40
Novel Protein Genes	47
Associated Families	38

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	2
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin139	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	1
All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium ADurb.Bin276	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Anaerobic Biogas Reactor Microbial Communites From Washington, Usa
Type	Engineered
Taxonomy	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor → Anaerobic Biogas Reactor Microbial Communites From Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline)

Location Information
Location	USA: Washington
Coordinates	Lat. (^o)	47.6525	Long. (^o)	-122.3049	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003987	Metagenome / Metatranscriptome	458	Y
F004383	Metagenome / Metatranscriptome	440	Y
F005744	Metagenome / Metatranscriptome	391	Y
F009968	Metagenome / Metatranscriptome	310	Y
F014935	Metagenome / Metatranscriptome	258	Y
F018746	Metagenome / Metatranscriptome	233	Y
F018909	Metagenome / Metatranscriptome	232	Y
F021528	Metagenome / Metatranscriptome	218	N
F024821	Metagenome / Metatranscriptome	204	Y
F026908	Metagenome / Metatranscriptome	196	Y
F028541	Metagenome / Metatranscriptome	191	Y
F029085	Metagenome / Metatranscriptome	189	N
F030486	Metagenome / Metatranscriptome	185	Y
F031138	Metagenome / Metatranscriptome	183	Y
F034940	Metagenome / Metatranscriptome	173	Y
F036251	Metagenome / Metatranscriptome	170	Y
F040648	Metagenome / Metatranscriptome	161	Y
F042353	Metagenome / Metatranscriptome	158	Y
F051061	Metagenome / Metatranscriptome	144	N
F051165	Metagenome / Metatranscriptome	144	Y
F051235	Metagenome / Metatranscriptome	144	Y
F059692	Metagenome / Metatranscriptome	133	N
F065813	Metagenome / Metatranscriptome	127	N
F073596	Metagenome / Metatranscriptome	120	N
F076128	Metagenome / Metatranscriptome	118	N
F078674	Metagenome / Metatranscriptome	116	Y
F089495	Metagenome / Metatranscriptome	109	N
F092293	Metagenome / Metatranscriptome	107	N
F092294	Metagenome / Metatranscriptome	107	N
F094051	Metagenome / Metatranscriptome	106	N
F094052	Metagenome / Metatranscriptome	106	N
F095421	Metagenome / Metatranscriptome	105	Y
F095525	Metagenome / Metatranscriptome	105	Y
F103319	Metagenome / Metatranscriptome	101	N
F103320	Metagenome / Metatranscriptome	101	N
F103497	Metagenome / Metatranscriptome	101	N
F103505	Metagenome / Metatranscriptome	101	Y
F105193	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0116233_1001863	Not Available	704	Open in IMG/M
Ga0116233_1003315	Not Available	803	Open in IMG/M
Ga0116233_1007352	Not Available	710	Open in IMG/M
Ga0116233_1008691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1040	Open in IMG/M
Ga0116233_1015886	Not Available	572	Open in IMG/M
Ga0116233_1034016	Not Available	525	Open in IMG/M
Ga0116233_1058040	Not Available	1026	Open in IMG/M
Ga0116233_1062749	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	778	Open in IMG/M
Ga0116233_1084668	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1020	Open in IMG/M
Ga0116233_1085068	Not Available	506	Open in IMG/M
Ga0116233_1108100	Not Available	541	Open in IMG/M
Ga0116233_1112485	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	591	Open in IMG/M
Ga0116233_1114004	All Organisms → Viruses → Predicted Viral	1727	Open in IMG/M
Ga0116233_1127542	Not Available	2274	Open in IMG/M
Ga0116233_1132416	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	644	Open in IMG/M
Ga0116233_1133152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	811	Open in IMG/M
Ga0116233_1136727	Not Available	605	Open in IMG/M
Ga0116233_1138458	Not Available	858	Open in IMG/M
Ga0116233_1140134	Not Available	623	Open in IMG/M
Ga0116233_1142768	Not Available	864	Open in IMG/M
Ga0116233_1156613	Not Available	597	Open in IMG/M
Ga0116233_1160209	All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	714	Open in IMG/M
Ga0116233_1163099	Not Available	1044	Open in IMG/M
Ga0116233_1168420	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	501	Open in IMG/M
Ga0116233_1176529	All Organisms → cellular organisms → Archaea → Euryarchaeota	1350	Open in IMG/M
Ga0116233_1186626	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
Ga0116233_1197038	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	542	Open in IMG/M
Ga0116233_1201509	Not Available	503	Open in IMG/M
Ga0116233_1214277	Not Available	1267	Open in IMG/M
Ga0116233_1220006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	868	Open in IMG/M
Ga0116233_1230167	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin139	1344	Open in IMG/M
Ga0116233_1235472	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin028	516	Open in IMG/M
Ga0116233_1237255	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium ADurb.Bin276	592	Open in IMG/M
Ga0116233_1240311	Not Available	589	Open in IMG/M
Ga0116233_1242182	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	632	Open in IMG/M
Ga0116233_1250263	Not Available	693	Open in IMG/M
Ga0116233_1257327	Not Available	595	Open in IMG/M
Ga0116233_1258537	Not Available	619	Open in IMG/M
Ga0116233_1260464	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	852	Open in IMG/M
Ga0116233_1261214	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin112	2410	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0116233_1001863	Ga0116233_10018631	F036251	MTERQTVLFADTGVVEPIDSTERKALTNGVVFVAQRIEIRRSNKYSEYVIFDGEDLEGKAFHGYTTSSVILQQAKALLERYGGENGALSHDVLCAVKAVVSETTGRR
Ga0116233_1001863	Ga0116233_10018632	F040648	MTGQEETVINNDEVRLKIDPLLDTAREGVTALETATTLIHIPTREMAKIQTAITKMREAAVYIENRARNLPVRSNATTKSALKDALKGATQEQIDRAYAILSGQE*
Ga0116233_1003315	Ga0116233_10033151	F026908	VETRNKHHRRVFTWFASRWRNHQPKRAKKPHSILQRFPKGTLDGPATRPKTPFAAENSVGKLAAPPRRERQMPAREREH
Ga0116233_1007352	Ga0116233_10073522	F040648	VTALETATTKIHIPTREMAKIQTAMIKMRQAANYVENRAHNLSVKPDKITKTALKEALKDASQEQIERAYTILSGLDDAYETAKEDLGEGGAMTDEETHYFIQVKGDEE*
Ga0116233_1008691	Ga0116233_10086912	F024821	MRYQEQHGREKASAIQERFWKDRERVVSESAEEIDWFPSWKKNQVLESLLEKTYRDLIREMELEGLP*
Ga0116233_1015886	Ga0116233_10158862	F051061	MSLLDKLEERSKKRERKSLYIPELEETVYWYPMTAGERQRIMNAAGFKWARDAVQMDNAKYKASLIIEKLEDKDGKKIFSNTPEHKDLLINRIDDEFLSRIATAIDPPKSEEEQIEEAKND*
Ga0116233_1034016	Ga0116233_10340162	F018909	MKWIKVAIGALIAISVLPMIVNTIADLTGESGALAGTVGGTLLDLAPIVFIAGILSFLFLKTGSKD*
Ga0116233_1058040	Ga0116233_10580402	F073596	MNIFEKIKLWFTSISGIVNFLLKTFKDAGILADKKANFKTWTEFVIAFIQDALQYAEEIASLVKETAPIQTKGQVIKAVKKTKAEPISTKFRTKYFITKAEDFNK*
Ga0116233_1062749	Ga0116233_10627493	F031138	MTKRNNCVGPCATACKPGAGTDTQNGTFDRILVAATEHAAREVGLPGRADRMIACRSCGAPTAGSDGICRDCADAMRAERSEALSALCRVHRVRRVEDLPVSVLQEMQAEWGRC*
Ga0116233_1076773	Ga0116233_10767731	F095421	EIALAGPSSWRRFVRAAQAAENESLHRWIAVNQGTIETQFARRAFALHRVSDAPLTTAALDQITRPIVTALYPRRYALKNRERLNRLLMLLQLHVNGDDDVQAYTRAIRFHLEQNAGRPREDRRAVTDPRNSPSLR*
Ga0116233_1084668	Ga0116233_10846681	F092293	MTRPPALTDRQIQIIRENLDLFPADILKLPGFADADITRHTIRNYQRRLKNAAVIDEEEDLLARLKKHIDRHGLESQFHGPRGVTGFIRHLETKIHLRAIERDNSENTV
Ga0116233_1085068	Ga0116233_10850682	F065813	MTLLMKFFGWFDVIIATPFAIYLGYKIIKWIIGKLKKQPQEGEIDTPDVES*
Ga0116233_1108100	Ga0116233_11081001	F103320	FYPSLKVKNPAGDTITVNPVAAAFNERFRENESYPAFILKDPKSGRIDTLTWDVLDWDDDSVALYLGSGTGTTTDVWMAPTDSYCAEKTVRIDFLTGWTWYFPRLKIAAAPGGDGSAAGSINLQVVAKVQPLGELEPFQRIATPVLAAEPDPED*
Ga0116233_1112485	Ga0116233_11124851	F076128	LYLAYQFRSCGQQMVTLQVSNAVLSTDLKETRAENLKLIGDLQKTRADLALTRGELEKTRAALNSCTDAINGGS*
Ga0116233_1114004	Ga0116233_11140043	F042353	MTSNTLPATLTGDARRRLERIIRDDLEHATVSSAMVLVEEGGRIVINELVLRLDDGRMVTLMPLDVSAEVAVDLRLDIYDDHLPGGHGWREATVAEDYAEDLAESTAPPRSPEPDTLEEARL*
Ga0116233_1127542	Ga0116233_11275421	F103505	MDPTLLREYENKLAAWLAQGYQLLADDVDGELRLTVHFVSRDGAVGSEREQEFWPMTAEIVELLNDNGITISRALAGPRPWAGPHPEDL*
Ga0116233_1132416	Ga0116233_11324161	F003987	VIPSLPCGTFSDGDTPAGAFYVAAFEDGDQTHHVGEYRIETVLRALRALQACGYDDVEIGSIERGGKTHLLLIGLDGEARFGDRQTGCVAVAPVGV
Ga0116233_1132416	Ga0116233_11324162	F004383	REALAALQREFDERPDVIEIKRLIDRCEEERRTCIEQAKAAGISKQGSFLLKIRTRKQRTVIPKLFFAKHGAEAFVECATIAIGKAEALLGKAALDDCCEVEVKEIGVSVEYVRLEGSE*
Ga0116233_1133152	Ga0116233_11331521	F028541	REQQGAFMNERERLKLINRLKTARTSEERDEILWYLAGQDKAARGKVQRAEPTGTGKPAPVPAPEKHPLGLPAGKLGGMGSITSLLFLFYGLVTIAAAAAKIVQGQMEGDEIKQLIMGGIFLVVGVVLFVKAKRAQRKAAEEA*
Ga0116233_1136727	Ga0116233_11367271	F089495	LRKKHVTISLFDATATTPFTQTITGYADVPELPEPVIDAPAEGYAPQGAFNSIEEGDDTVNLPEFSITVDISDGDVASNKYALNEWFNNHKDSTGSTTLKSTNDGSAYLKKSIDGSTVSANLATDWFTIGMKVLFNNGGTSKAFGKQYKYVRPISATFSTSNKAQVTLRMQIVGAPTDITS*
Ga0116233_1137393	Ga0116233_11373932	F103497	MVEELTPKETRVTRGTKAEGEVSFQSSENAYTAPKITPETARNYFEQNIHLATQIVNLLPQVFPGAPDIYVEDRGLERVDDLSRWIARTAESVGVYPSMKASWIDTMSHGCSVKSVGYVFRNGRYEIDEIRDLPAITFRQPPRTLGMFQAPPNPLMPGVVWDVKEKRVRVFQTLDDTLALHELKNFTIIRDPSTPFPAGRAYCLPAYHIIGAIDHANKAADQQVHRVGAPLIFPQITETITADLKTWGDNFVRTWGKDTGFVIPPGVAFPDVKIRENQTAADRLKLLVSWLEVYFNPTTVLRSGAGTVIGASDSGAMRVWNNFIGG
Ga0116233_1138458	Ga0116233_11384582	F009968	MNTCLGCRSHYRERHWWIFEIDFCGLDGDVVGFECPIGCIDTEGCPAYERRPAWPEGAVA
Ga0116233_1140134	Ga0116233_11401341	F078674	EVSMEALRKAVENRKAPFEFGGKTGTRGRVISLRVSERMEQLLEEQAQEWNMSISDTLRGILNFYFLPPVLYEAWEKKVQELIDLDTEQKGENRADMSAPTHAQRIEPVFCDSEEAEEYANFIHELWDKNLRYWEILREEAVTANRIAVKQLTETAEALKRCKYALPERAEVEP*
Ga0116233_1142768	Ga0116233_11427681	F034940	MGNNCWYYRAQYAGMTKVCMRQSIVECGRIVRFGLCAIPPDSEEWRRCGFAIGQHEIPARYEG*
Ga0116233_1142768	Ga0116233_11427682	F005744	MDEMFEIIKAGAPYGPPEQALYRIQHTYSDGSGSRLNVDWEGLLQLHELIHDRIALEGRVCETCDTKGCHRPATWEIECRGAGVSGRLIYSCDEHCPDPAILSPQDEIRRLVEER*
Ga0116233_1156613	Ga0116233_11566132	F029085	MKNIKDDKIKIDELLEENISEQLENGSSDLVSLIAISELTNLDKLKVITRIKEEQVPILTKLYMYAETFKIPFIKNMADNILQLQVSIRGLGRKELVNIVRESTPTEVK
Ga0116233_1160209	Ga0116233_11602091	F003987	IGMIPALPCGTYADSGVPAGAFYVAAFEDGDQPHHVGEYRIETILRALEALQACGYDDVEVGSIERDGKTHLLLIGLDGEARFGDRQLGCIAVAPVGVE*
Ga0116233_1163099	Ga0116233_11630992	F094052	WGDNFVRTWGKDTGFVIPPGVAFPDVKIRESQTAKDRLEQLRDWLEFYFNPTTVLRSGAGTVIGASDSGAMRVWNNFIGGTQAWIEEQYEAFLQPILTANGYDDLNVRIQLKRPELDRSTVIVEQLRVGIEGRALTRDDIRRNLSELDLGELTDEVRAELDATYAAAPATLFENLAGFTRKEGRRVSAAERKIIAANEASLRAIERILERGGE*
Ga0116233_1168420	Ga0116233_11684202	F018746	MRPTSETLNDFEAAVLAALEQTPEKTVLAADLVREFSTRAGRTSCISRLERMERRGLVRTSRFAGRILVHHPPAEE*
Ga0116233_1176529	Ga0116233_11765292	F094051	MANTGVLGKVQIEGNWTQKRLILPVIQAALERTSLASPAIGPTMTYAKLKGTIPLLGPVPVQSQLDEFEHAVGGGGKPSGFDIEVLKDRVVLYVSDEAEIESDVGNPMSLQQQAAAGALAANLNKLIAERLNTTPQVYGTGGDLGNWTSVKPTLAVGKMAAAMGVHRPTALVMGTLAGAYYVDAVGDKVAIANLAEWRGATSIHPTLNIPVFISTDVDKLDDTSGNRFVFGVCNATPGVVTVISKIKARQYDDPNLGAQVYQYDIWRSPFSNIQQTSGNLNLGVMRGIMKES*
Ga0116233_1186626	Ga0116233_11866261	F021528	MIDTLKLMLNEYEISDDSEIRVQPASYELGTGSKVEYPLFQTPSHGAHYGSKAYLNEDNWNLTLKPLAGGKATGAFLQLSVPKNYYGSNFYSVGEEGTKAVLRKVEGELKEKGVHTSLIEADMSRVDTFKNIEPEEPFSSYYSLFSLLKARKAIQRGYGTTFLLSNTQQEFCVYDKLEEMRKRKLETANLPNTMRFEHRLLNKQKVQNVYGFGKVEDLFRGGYAVVKEKQVESWKGSLFNFTAEELVVLGSKQLEQEMRRFKERSPSGWFSKFLKAYGAYYLASHAGKEVIVEALQNFEA
Ga0116233_1197038	Ga0116233_11970381	F030486	YVALAQSRGGACFCTRGAIQGYDAICLFSRWQKP*
Ga0116233_1198569	Ga0116233_11985691	F014935	MPVAFSDPMSIDFGGGAISLPRVSTGEHNSTYTSADGQTDLSASHAYGRRTRRVLRVDRSKITSDPFIPAQNREVSMSTYIVFDIPNVGYDATEAKAT
Ga0116233_1201509	Ga0116233_12015091	F089495	TTPFTQTITGYADVPELPEPVIDAPAEGYAPQGVFNSIEEGDDTINLPEFSITVDINDGDVDSNKYALNEWFNNHKDSTGSTTLKSTNDGSAYLKKSIDGSTVSANLATDWFTIGMKILFNNSGTSKAFGKQYKYVRPISATFSTSNKAQVTLRMQIVGAPTDITS*
Ga0116233_1214277	Ga0116233_12142771	F031138	VLEKYPDNRGAALALERNNYVGPCATACKPGAGTDTQNGTFDRILVAATEHADREAGLPGRVDRTMIYCHSCGAETANDRTCDACAEALREERADVLEERCRIHRVRYVDDLPVSAIEEMQAEWGRC*
Ga0116233_1220006	Ga0116233_12200061	F051235	MELSEGGVVTIYKKKWSRQFLGFIAVTMRWPMLLLLSLGRFLKINCIFTVYPGSQRDVDGYFPKGLKWFLKPVASGKPFVAGVITTGNGLGRGLVLAVPNTVDQFRQDRELVGTIMKNLKLTRTLTGARTIAIAGQGPRFFRSHFPYEQPFVYGLKGRVFSVVETVERVTEKHGLRKEQTTVAILGVGEIGAAIISNLEEKGYRAVGIEIRIADGRVEIGREGMERLKGADLVVVQTPRGDDVVPYYGNLKDTA
Ga0116233_1230167	Ga0116233_12301671	F065813	LDVIIATPFAIYLGYKIIKWIIGKLKNKQPQEGEIDTPDVES*
Ga0116233_1231894	Ga0116233_12318941	F105193	MTPLTISLNYDRPTALLQPDARGQPRHISLVIDWVQATITAETRDPSDNGIPETRWRGMEDAYPLPPLVDATELREWVAEEVLPRAAPLADAYETVWEDIEQFGRFPGREQEKGDFDAWMDRAEPPTHDGGLWTVTDWLAGGVEEVLETTSD
Ga0116233_1235472	Ga0116233_12354722	F051165	QTMTTSFQKALAIMASVASVLAGVVTIASYLSGEDVTLPPSSATVPSESRPVIIQARAVFVDDDKIYILDYDNNLIEWNESLDVEVL*
Ga0116233_1237255	Ga0116233_12372551	F059692	MDKETKELILKKLQLDYLSLHAILTDIEKIVSALAVDLDPRVNEIQRIQDQIRVYLREP*
Ga0116233_1240311	Ga0116233_12403112	F018909	EGLIYMKWIKVAIGALIAVSVLPMLVNTIADLTGESGALAGTVGGTLLDLAPIVFIAGILSYLFLKTGSRD*
Ga0116233_1242182	Ga0116233_12421821	F092294	VYHRNNGGYVFYDAKHFAPTVDRWNAVPVIYVETGPGEPAEHPQFKDVITRTLPAKFRTVGSVSAAHLTETGEKVLKGAIAFSDPAIAAKANAGELSLSTGLASPEAPDPRLPGATRIAGPVTPNHVLVFDRGACPNCYPNDSGAMFHNL
Ga0116233_1250263	Ga0116233_12502632	F040648	VRLKIDPLLDTAREGVTALETATTLIHIPTRQMAKIQTAIKKMREAAVYIDNRARNLPVRSNATTKSALKEALKGATQEQIERAYTILSGQDAAYEVPAGGEEE*
Ga0116233_1257327	Ga0116233_12573271	F078674	KNMEELKKAVENRNAPFEFGGKTGTRGRVISLRVSERMEQLLEEQAQEWDMSISDTLRSILNFYFLPPLLLEAWESKVEELVELDTKQRGKNRADLNAQTQAQRIEHVLVDSEEAEEYALFIHELWEKSLKYFETLREEASTMNKIAEERLLKTAKAFRKASKKLEEAEVQQ*
Ga0116233_1258537	Ga0116233_12585372	F065813	KFFGWFDVIIATPFAIYLGYKIIKWIIGKLKNKQPQEGEIETPDVES*
Ga0116233_1260464	Ga0116233_12604642	F095525	MKELTDIGLVAFGVVVGVVLGQLLQYNKHRIENFINKLKKK*
Ga0116233_1261214	Ga0116233_12612143	F103319	MADQYNSIGHHPKSTYMTSEGHALHNISGLDLIIDIAGVYFPLRSINYAANHNVTDEHGTGTHDPVALTNQEHTYTGTFTYASFLVTGENVLTQKDVLTLTQLLQDQADEGVSKYFDIYIIEVQGKRTPGTGTTFEEQVEAALQNESMVGYIEALVDCKVTKVNRDIPEKNTVVSSREFKYSYKIPR*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009589: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B SIP RNA (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences