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Sample 3300009452
3300009452: Marine sponge C. singaporensis. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', co31is 06june2016
Overview
| Basic Information |
| IMG/M Taxon OID | 3300009452 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0117787 | Gp0124749 | Ga0128062 |
| Sample Name | Marine sponge C. singaporensis. microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', co31is 06june2016 |
| Sequencing Status | Finished |
| Sequencing Center | University of New South Wales |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 12073252 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 2 |
| Associated Families | 2 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| All Organisms → Viruses → Predicted Viral | 1 |
| Not Available | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
| Location Information |
| Location | Upa-Upasina |
| Coordinates | Lat. (o) | -9.8241 | Long. (o) | 150.825833 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F001905 | Metagenome | 619 | Y |
| F090511 | Metagenome | 108 | N |
Sequences
| Scaffold ID | Protein ID | Family | Sequence |
|---|
| Ga0128062_101373 | Ga0128062_1013731 | F090511 | MLYPFKRKILQRMGLNHVAYHGNKNCNEDWLNGYFQAKKDLEMQLNQIRITTDDLD* |
| Ga0128062_102384 | Ga0128062_1023842 | F001905 | MFPFYIRMAILLCVGAFAPIIIHHIIMKLWDVSILRAAEYTFIACIPIAVWMAEKINERWNDEDQ* |
