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Sample 3300009326
3300009326: Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 900m, 2.7-0.2um, replicate a
Overview
Basic Information
IMG/M Taxon OID 3300009326 Open in IMG/M GOLD Reference Gs0118094 | Gp0137036 | Ga0117911 Sample Name Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 900m, 2.7-0.2um, replicate a Sequencing Status Permanent Draft Sequencing Center Georgia Genomics Facility Published? N Use Policy Open
Dataset Contents
Total Genome Size 392104434 Sequencing Scaffolds 3 Novel Protein Genes 3 Associated Families 3
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia 1 All Organisms → cellular organisms → Bacteria 1 Not Available 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Marine Water Column Microbial Communities Of The Permanently Stratified Cariaco Basin, Venezuela Type Environmental Taxonomy Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Marine Water Column Microbial Communities Of The Permanently Stratified Cariaco Basin, Venezuela
Location Information
Location Cariaco Basin, Venezuela Coordinates Lat. (o ) 10.5 Long. (o ) -64.66 Alt. (m) N/A Depth (m) 900 Location on Map
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Associated Families
Family Category Number of Sequences 3D Structure?
F013484 Metagenome / Metatranscriptome 271 Y F052014 Metagenome 143 Y F088317 Metagenome / Metatranscriptome 109 Y
Sequences
Scaffold ID Protein ID Family Sequence
Ga0117911_1008906 Ga0117911_10089061 F088317 MPGPEDHVKYPPPPKITQEETSKNLPKSKRDHYEGVKVPPLPPLEKSQVLRVIESGFKEKEDIGRYVMTPPPELPYRILPLQTKFVSTNTRHLKEIGAFRTLMPELFGEAGYKAVDDAYASFAYSEFAAAQRRGQLKNAPNCTAREIGTYIATAYDIQNFPIVVAEATDDRVRIQLYKGLPVYCPYDVRRGDYRLCSATAAYEREITKMCNPKYRAYLSRTKAIGDDC Ga0117911_1032306 Ga0117911_10323062 F052014 MNRVPTTLYLWISRAAGFVGIAFLFVAFITRVTDLRAMASPATYVLLAIAAFLVAIWAVLYELRDQGIKTR* Ga0117911_1042736 Ga0117911_10427361 F013484 VNVQIDLSGCTLSIENQAVVDAINKFLVLLPDDADHKAALRLAMVILEAADVAPQADLARAADFAQSRSLRDYKQRLREEGLSGLWDHPIPGRPAITTRTPVEKALFQVILSAVIEEHALPDDVTLADRVNQALSEAQVPEAGRVTAPMVETIRLRWEIRRPTLTQQLQATRQPVAAETDLARLGQTRVGGAFILAMLLVETGWLKLAHLLPMAANYAVTATQWLLTAIFAVIYGVRRAFHLDDVRDIGFALLTGRPRPLTHGTFQHLLRAIPAEDAEKFYQASAHLEVQALGEGTRRISLDGHNLPRYTRVVDLVKGKIGNTGRVLKAEELVLAYDLDGHLWLGLRAYHGTKKLSKGLVEIVRELLNHRGSLKGLLRLFFDKGGYSGQIFLALSEESQVHFYTPAVRYPNNVAQWEQLQESDFDADTFVFDKHADLPVEQRPVYRLADTEMTINVRERNKVVGTVTLRAVVLHDPQGEKPAERWPIVLLTDDYEIDARALLNEFGDHWGQEVAHRIGKHDLHLDILPPGYILKTRRDDQGQLHREVEYDQTAFFLSAWLRCLVFNLMSRFAQAMGGEYIKMWAGTLLRKFIRRP
