| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300009203 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117969 | Gp0126338 | Ga0103749 |
| Sample Name | Microbial communities of wastewater sludge from Singapore - Sludge9_b2_February |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Singapore Centre on Environmental Life Sciences Engineering (SCELSE) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 298663318 |
| Sequencing Scaffolds | 24 |
| Novel Protein Genes | 25 |
| Associated Families | 22 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → Viruses | 1 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 5 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta | 1 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis | 1 |
| All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2 |
| Not Available | 6 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 1 |
| All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta | 2 |
| All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C | 2 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata | 1 |
| All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea | 1 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Microbial Communities Of Wastewater Sludge From Singapore |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge → Microbial Communities Of Wastewater Sludge From Singapore |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Singapore | |||||||
| Coordinates | Lat. (o) | 1.2 | Long. (o) | 103.45 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000203 | Metagenome / Metatranscriptome | 1619 | Y |
| F000606 | Metagenome / Metatranscriptome | 993 | Y |
| F001679 | Metagenome / Metatranscriptome | 653 | Y |
| F002636 | Metagenome / Metatranscriptome | 541 | Y |
| F007695 | Metagenome / Metatranscriptome | 346 | Y |
| F008498 | Metagenome / Metatranscriptome | 332 | Y |
| F011950 | Metagenome / Metatranscriptome | 285 | Y |
| F015326 | Metagenome / Metatranscriptome | 255 | Y |
| F017318 | Metagenome / Metatranscriptome | 241 | Y |
| F022887 | Metagenome / Metatranscriptome | 212 | Y |
| F023044 | Metagenome / Metatranscriptome | 211 | Y |
| F025660 | Metagenome / Metatranscriptome | 200 | Y |
| F026607 | Metagenome / Metatranscriptome | 197 | Y |
| F026814 | Metagenome / Metatranscriptome | 196 | Y |
| F030999 | Metagenome / Metatranscriptome | 183 | Y |
| F035116 | Metagenome / Metatranscriptome | 173 | Y |
| F039594 | Metagenome / Metatranscriptome | 163 | Y |
| F042359 | Metagenome / Metatranscriptome | 158 | Y |
| F052619 | Metagenome / Metatranscriptome | 142 | Y |
| F061786 | Metagenome / Metatranscriptome | 131 | Y |
| F098810 | Metagenome / Metatranscriptome | 103 | Y |
| F103024 | Metagenome / Metatranscriptome | 101 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0103749_10014633 | All Organisms → Viruses | 996 | Open in IMG/M |
| Ga0103749_10016834 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 935 | Open in IMG/M |
| Ga0103749_10017569 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 917 | Open in IMG/M |
| Ga0103749_10019085 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 885 | Open in IMG/M |
| Ga0103749_10021317 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis | 842 | Open in IMG/M |
| Ga0103749_10022086 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 829 | Open in IMG/M |
| Ga0103749_10022091 | Not Available | 829 | Open in IMG/M |
| Ga0103749_10022718 | Not Available | 819 | Open in IMG/M |
| Ga0103749_10025200 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 784 | Open in IMG/M |
| Ga0103749_10029930 | All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta | 726 | Open in IMG/M |
| Ga0103749_10032158 | Not Available | 702 | Open in IMG/M |
| Ga0103749_10032376 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 700 | Open in IMG/M |
| Ga0103749_10041281 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 628 | Open in IMG/M |
| Ga0103749_10042290 | Not Available | 621 | Open in IMG/M |
| Ga0103749_10043712 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea | 612 | Open in IMG/M |
| Ga0103749_10043930 | Not Available | 611 | Open in IMG/M |
| Ga0103749_10044658 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C | 606 | Open in IMG/M |
| Ga0103749_10047307 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Theileriidae → Theileria → Theileria annulata | 590 | Open in IMG/M |
| Ga0103749_10050433 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 574 | Open in IMG/M |
| Ga0103749_10051419 | All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea | 569 | Open in IMG/M |
| Ga0103749_10053425 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus | 559 | Open in IMG/M |
| Ga0103749_10063788 | Not Available | 516 | Open in IMG/M |
| Ga0103749_10067082 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C | 505 | Open in IMG/M |
| Ga0103749_10068363 | All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta | 501 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0103749_10014633 | Ga0103749_100146331 | F052619 | MKCPVYRPVYKFSRFVEARYDISTNGIAAELGAFTFSLDALPSYTDFTNLFDMYRITRIEVCFQPEYTELTDAALVSNAVNCYFNTAIDLVDASPPVNVDDLLQYQQLESTSITKQHVRKWNPTILMGGNIPCSCWLPTSNPSESHYALKYAIPPTGVAMTFRSRVRVHLEFANVN* |
| Ga0103749_10016834 | Ga0103749_100168341 | F000606 | MKAALALIFFACVAGSMAADARSQLIQQLVEQGQVIAQGVFGQLQQQVLALAQQAIGQLSTLIGSFGRFDFEAIIAQFKPLVNQYINQALAGVLGSLQGLIGGRASFDFGAIFNGLLEQVTKPLTEMGQHILNQGLAAVLGSFGSRGIADLFAGLQQQIGTAVSAAQGALTGALSNLASLGSSILDASKPHWEQLQEQLIGHGLNALGSISETIGNLHGTITGGR* |
| Ga0103749_10017569 | Ga0103749_100175691 | F030999 | TEKMNWSMIILGLVALTSVAIAENSYLVMVPKLLKVGYDNQLSVWIAAASQPVEVKFELSIYERRVERTATVKPGETRNVTMTLPAEFPVGPAELTIIGTGGVRFEEKRDIIVYDNRYVVLVQTSASTYRPGDKMEVRVVATNEELLPIEMGEVLIEIYDANLKLVGEFPRVPIRYGITEVFEFPIGEHCNIGTWLVSATMGNTTSSAEVLVARPATPSFDLKAIFQRFLLRTDKTLRGVIEIDSDINEPIFGRCLIAVGPIMEEDVVRMMKEQQDKLKTPTEEKKPMTEEWRKWKSQQIEIAGR |
| Ga0103749_10019085 | Ga0103749_100190851 | F000606 | MKAALALIFFACVAGSMAADARNEMIQQLIQQGQVLAQGVFGQLQQQILAFAQQAVGQLSTLFGSFGRFDFQSIVDQFKPLVNQLINQALGGVLGSLSGLIGGRASFDFGAIFNGLLEQVTKPLTEMGQHILNQGLAAVLGSFGSRGIADLFAGLQQQIGTAVSAAQGALTGALSNLASLGSSILDASKPHWEQLQEQLIGHGLNALGSISETIGNLHGTITGGR* |
| Ga0103749_10021317 | Ga0103749_100213172 | F001679 | VWGMSRRQETMKGVEDCEKPGEAVKRALIPGCPNCRMLNP* |
| Ga0103749_10022086 | Ga0103749_100220861 | F103024 | MRTSRKFTHALLALFALVVMSSFAMAADPGLLYPPQSEFSDQKAGSLLVYNYYTSGATSGNAQNTRINITNTSTSSAAFVHLYFVGETCLIADSYICLTTFQTASFLASDIDPGVSGYLVAVAVDAVNGCPAAFNWLIGDEYVKLTSGHAANLGAEAFSALWDGPGSTPGAAPVLPGCDANSTVATLNFTGAFGGYNLVP |
| Ga0103749_10022091 | Ga0103749_100220912 | F008498 | VQKKLWNDSIEDVLQGLFIGRTLHVCCGKSLLGDVRLDADAENNPDIICDASKMQDFVKDNEFETVICDPPYNGNFQWNHDLLAELSRVASKRIIFQHWFIPANPTGTYKKAQEKFLLSDVLVWQPKTYFGRVQVVSVFDAVS* |
| Ga0103749_10022559 | Ga0103749_100225592 | F000203 | GTKWGMGVRQALFPGLALGAKLAASFPTLFSTASGVIGLVAGPSSSLRALDFE* |
| Ga0103749_10022718 | Ga0103749_100227181 | F007695 | VNALPKAVAALGLNGQDADQNHRSVLIWFAGRWRNHQSKRAEKPHSKFSDGDALDGPATRPKTPLAVENSVGKLAAPEAPNASTGKRAWRTPIPHR |
| Ga0103749_10025200 | Ga0103749_100252002 | F001679 | VWGMPWRQEAMKGAEDCDKPGGLVKHELIPGFLNAVL* |
| Ga0103749_10029930 | Ga0103749_100299301 | F039594 | PLQATWVKEIWCDAAYFDRPWMCDIEIPTRASHPGDNAFFVAVYGKNATYSIAFWRGRENCHAFTGSGRDDGLNFCAGLVPYATWRWDNYDNLDKEARCLFEDLYNHFKCQPCWNGVSIECNATLQAFACYESFRKCDQYGFAVGTCRDSCEAVVYECANWFETVDLEHYNCSSSRYIDSSASECAGNENFSTFNSETQLFLEADPQLILFKSSPPVVSSSSASTIVISACLVVVALLLTLA |
| Ga0103749_10032158 | Ga0103749_100321582 | F098810 | MSVQHRFWWRVVRKYEGDEMWVPILRLAFVHSNGAISLKQGLPHQRKSYRVIQRGLRRYLGLKVSPTRAQQLANEALAHAVFAFYRRALPSNVDRSTVILRLTAVITEGRREKDKTRRVKEKGVHRVADEVHLWLPPKYAGDSADRPNPEPEPG |
| Ga0103749_10032376 | Ga0103749_100323761 | F011950 | MGLFGNKRDKTEKADKYEYQSSGKGGRSGYGPPALLGAGASPYFPGGGPFFDGFGQAAPQGKGSKYNKYSGPNKSLYGGDPMQQAMLLPPGSPAAMQAQAAAMLQMQQFMQGPGAGAQFGGILPPIQMPMGAAQQAGLIPPGGQPFFGFGGQAGTPFFDPSNPALQQPGAFAPYQQPNFYDPAAAAAFAGPYGYMPAAF* |
| Ga0103749_10041281 | Ga0103749_100412811 | F023044 | IGSFGRFDFEAIIAQFKPIVNQYINQALVGVLGSLQGLIGGRASFDFAGIFNGLLQELSKPLAEMGQHILNQGLAAVLGSFGSRGIADLFAGLQQQIGTAVTAAQGALTGALSNLAALGSNLLDASKPHWEQLQEQLIGHGLNALGSISETIGNLHGTITGGR* |
| Ga0103749_10042290 | Ga0103749_100422901 | F035116 | VSAPGSQAGGATTSPSELKSLTQTSALPQNGILDGPATRPVTPLAVENSVGKLAAPEAPNASKGKRAWRTPIP |
| Ga0103749_10043712 | Ga0103749_100437121 | F025660 | TMLKLAVLVLIVAEIFISSTNGFLLHSKEKCEVSVFKGGKDFSGEKIMAHKLFQPHLKTIGAVAKSCKVKVRVSESYKQLKTPNEFVLSSELPLALGHGIRFDLQDQKGGTLCNKLCMISRSWKTISDANCFITGVQKKGIKFTEPALLDDGYAAKLSSTDADAAKATVQKLCAPKTKAPKL* |
| Ga0103749_10043930 | Ga0103749_100439301 | F026607 | MMKKFVTTTVALALALSASVALAGTYVTGPLPSEFGGGFIPSDPAILKNVQKASKEGAKLAASVEKCYSKGAANYSKNKPTGVSTCLNDPAKGVLPKFTAKINGIAAKAPGLPPCHNYVADGNLIAGLVKGFNPSGYCQSPSGAFVDGTASF* |
| Ga0103749_10044658 | Ga0103749_100446581 | F052619 | KSAVNRRARQDKTPVNSQTGIVMRCPVYRPVYKFSRVVEGVYDIPTNGIAAAVGAFDFRLDVLPAYTDFTSLFDMYRITSIEVCYQPEYTELTDAALVSNAVNVYFNTAIDIADVSAPANVDEVLQYQQLASTPITKQHVRKWTPTILMGGNVPCSCWLPTSNPSERHYALKYGIPPTGVAMTFRSRVRLHLEFANVN* |
| Ga0103749_10047307 | Ga0103749_100473071 | F026814 | IAATPLHPQWPTSFSTTAVFNVRGARRPEFSRWFYSQSQNIDRLDGLSEWEGELYFAERFFNHNTNREYNVFYQRDASVQCFTRAIQNPLPQPNFVNFTYVGQALIDYQPAYHWILRGRDGAFFQFFDAQNTRQPLRFDAEFPGRPAIQINYMEFDAAPQSSQIFQIPSQILAICNNVNNKGNVF* |
| Ga0103749_10050433 | Ga0103749_100504331 | F042359 | NLGAVAFSRLNAETACNGASVTAAINFNGIDYNCSPAVVALDNVGSRADGNDTLVILNRVGGNLGIGASTLGTVFGLLYDDAENVLSFSVTGSCQLRNSLSNNFPRTTPRFETFIPAGRTGWVKFYNQTGAIGILGAAINFNANAASSAGAFNGGHNLHHLTLNCNQSYTVPVFPPSC* |
| Ga0103749_10051419 | Ga0103749_100514191 | F015326 | EHGGDWCMCLDFFKGNVECCEPCCGKPCNTNDGIYCCLSFFPGCFCVGPKMYAASQDQACAFVNHCIPFLALLVAIVPIVGGILAFILWCFIRTGIRFNLRKKHGIGDTSKWHMCDCCGIWFIVPAPCFGCQELRSCQKEHWDWYAAFNDKKFPAETQIDPCYMFCVE* |
| Ga0103749_10053425 | Ga0103749_100534251 | F022887 | MPRDQLGNKILQNKLKKFYALTLDTNNDGIVNWLDFEAAVETIVPKEDAERNSRLKILRKRLEQNFQKYFWDLCEVGDANKDGNIDLEEWLDVMNDIIIHLKENGKFPEWYEGLHKALFRSNEFYDDRNVLQDEFVIMMSAWSIDEAAAKRAYDYITEGGKKKLDYGLFSEFMKQFFTN |
| Ga0103749_10063788 | Ga0103749_100637881 | F002636 | RVVLAGASPDRVSVAAPGSRLQPGGEIRPSQAECRKPLKEKGANRRAATISERNSLVRLSAERCSGGPSRSYHGEGNRQHPGANRVLDLPGVSGGGTSGKNSAEQERPSLAAVSGKDRAYKAGRRKSQGARRESEGPVVPMKPCKRTRWREGALL* |
| Ga0103749_10067082 | Ga0103749_100670821 | F017318 | IIKNPELNQIVKFTRTVEGSFDVITTGLTANVGVFNFSLNDLPSYTEFTALFDLYKIERIEIEWTPEYTELTDAAPVSNAVNVFFNTAIDPAGNTPASVDEVLQYRSLHSTAITKTHKRSFIPAYLADGALPVSSYITCASPSLNLYGIVYGIPATGVAMTFRSRVK |
| Ga0103749_10068363 | Ga0103749_100683631 | F061786 | MGANNTKGLYYCETIYPPENGISCIPPEKLEKAIKKGLIPPKPADDEEDLDGDMDEIIDKCIKEVWTHYDPKAVGFINKKQTQKFFQDALDLVALRKGVKEKDLFQGRPKGPAFEAAFKKVNTSGDGKVNYEQFEEFINSYDLDEAVALVTGGDTEVSIDT |
| ⦗Top⦘ |
 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |