Sample 3300008940

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300008940

3300008940: Final time point T34 (2) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum DE NOVO (2)

Overview

Basic Information
IMG/M Taxon OID	3300008940 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117890 \| Gp0125720 \| Ga0115997
Sample Name	Final time point T34 (2) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum DE NOVO (2)
Sequencing Status	Permanent Draft
Sequencing Center	Shell Corporation
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	68049203
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Methanogenic Incubations Using Athabaskan Oil Sands From Alberta Canada
Type	Environmental
Taxonomy	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands → Methanogenic Incubations Using Athabaskan Oil Sands From Alberta Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → oil reservoir → sand
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Canada: Alberta
Coordinates	Lat. (^o)	57.02	Long. (^o)	-111.65	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F103105	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0115997_1000432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	6848	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0115997_1000432	Ga0115997_100043210	F103105	MSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*

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