Basic Information | |
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IMG/M Taxon OID | 3300008803 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117972 | Gp0126359 | Ga0103770 |
Sample Name | Planktonic communities from eutrophic pond at the campus Essen of the University Duisburg-Essen, Germany - sample NP-2 |
Sequencing Status | Permanent Draft |
Sequencing Center | University of Duisburg-Essen |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 153856357 |
Sequencing Scaffolds | 18 |
Novel Protein Genes | 27 |
Associated Families | 23 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 5 |
All Organisms → cellular organisms → Eukaryota → Sar | 3 |
Not Available | 2 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis | 2 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium monilatum | 1 |
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata | 1 |
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Eutrophic Pond → Planktonic Communities From Eutrophic Pond At The Campus Essen Of The University Duisburg-essen, Germany |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | freshwater biome → eutrophic pond → planktonic material |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
Location Information | ||||||||
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Location | University Duisburg-Essen, Germany | |||||||
Coordinates | Lat. (o) | 51.46 | Long. (o) | 7.0 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000020 | Metagenome / Metatranscriptome | 6197 | Y |
F000023 | Metagenome / Metatranscriptome | 5736 | Y |
F000044 | Metagenome / Metatranscriptome | 3572 | Y |
F000070 | Metagenome / Metatranscriptome | 2710 | N |
F000073 | Metagenome / Metatranscriptome | 2639 | Y |
F000076 | Metatranscriptome | 2620 | Y |
F000241 | Metagenome / Metatranscriptome | 1481 | Y |
F000371 | Metagenome / Metatranscriptome | 1220 | Y |
F000606 | Metagenome / Metatranscriptome | 993 | Y |
F000631 | Metagenome / Metatranscriptome | 971 | Y |
F001300 | Metagenome / Metatranscriptome | 727 | Y |
F003455 | Metatranscriptome | 485 | Y |
F003495 | Metagenome / Metatranscriptome | 483 | Y |
F004094 | Metagenome / Metatranscriptome | 453 | Y |
F004725 | Metagenome / Metatranscriptome | 426 | Y |
F004726 | Metagenome / Metatranscriptome | 426 | Y |
F004781 | Metagenome / Metatranscriptome | 423 | Y |
F009877 | Metagenome / Metatranscriptome | 311 | Y |
F014616 | Metatranscriptome | 261 | Y |
F016241 | Metatranscriptome | 248 | Y |
F017489 | Metagenome / Metatranscriptome | 240 | Y |
F022887 | Metagenome / Metatranscriptome | 212 | Y |
F057415 | Metatranscriptome | 136 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
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Ga0103770_1012639 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans | 964 | Open in IMG/M |
Ga0103770_1013769 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 923 | Open in IMG/M |
Ga0103770_1015170 | All Organisms → cellular organisms → Eukaryota → Sar | 876 | Open in IMG/M |
Ga0103770_1016853 | Not Available | 828 | Open in IMG/M |
Ga0103770_1017137 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria | 820 | Open in IMG/M |
Ga0103770_1017207 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis | 818 | Open in IMG/M |
Ga0103770_1018342 | All Organisms → cellular organisms → Eukaryota → Sar | 790 | Open in IMG/M |
Ga0103770_1027529 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 633 | Open in IMG/M |
Ga0103770_1027556 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 633 | Open in IMG/M |
Ga0103770_1028899 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 616 | Open in IMG/M |
Ga0103770_1029407 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae | 610 | Open in IMG/M |
Ga0103770_1029462 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales | 609 | Open in IMG/M |
Ga0103770_1029706 | All Organisms → cellular organisms → Eukaryota → Sar | 606 | Open in IMG/M |
Ga0103770_1031485 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium monilatum | 588 | Open in IMG/M |
Ga0103770_1039854 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata | 516 | Open in IMG/M |
Ga0103770_1040493 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis | 512 | Open in IMG/M |
Ga0103770_1041584 | Not Available | 504 | Open in IMG/M |
Ga0103770_1041776 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis | 503 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
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Ga0103770_1007882 | Ga0103770_10078821 | F000044 | KHTTNKMKAFILFALIAAASADKAPLQIGQNGRKELRKGRQNGIEVQGGVDFSACQNDPDTGLCCVEKEETVKTIQKDPILECTHKNVEKCHYTYVTQFSPAQEEVCEENFEKTCQITFKQQAFNETVKKCYKPLEKVCNGQGPEQCRTVYESSCTTKYIEKQPGKFVGDTHCEKLPVEICGAGCVTEEGAEECHDKVITSLVDVPEETCDLNPQKTCRFQTKLVPRLKPTAECTTIPKEVCNLKFTQPQEVDKPLKTKWCLDPTPAEPGDKYEEGDALGAPLGAAASTNVQIVAQPEAGFDSQAQFQDEALPSYNENLPQYNNNFRQ* |
Ga0103770_1012639 | Ga0103770_10126391 | F014616 | GNTGPDWGFEEFILQKSRYMKKCMDAGVPMAPTIFAEKSERSPESLLTQIKERGWNTFVMKQSESGFCLGFLKLKVEDCEKDPSILTTYFADYENCPEFIVQEAVEGFTRNWETRCFWYNGKFLYAIANMAAVSSGDGAERIITGDDIPQEFLENAKRIGEQALKCLPDIKVQGGGSVPMILVCTDIGCSDGQMYDKDCKWNPAEKTFFLNEIEPSSTTYFVRHLKFDCIPIYGKLYTETARKAKEQMDIAEAARKAREQTDSSAAAKLEKKRAVENADDEAYAKKARCGA* |
Ga0103770_1013769 | Ga0103770_10137692 | F003495 | LVTNCDEISKLIKAFPKDIAALDKRIVLAKVNSQGSGR* |
Ga0103770_1015170 | Ga0103770_10151701 | F004726 | MTEQQRKPSSFLARLGTFAVAAGAASWALSAPSAFVGALSPSSRSTSTQMKGYRLDWMLEKKDGTSDLQVQDGFFIGERGFEKSQNAQGLRYRMRPTPEEYKKGIEVEGYMVQIGPFKMKLGEAFGGTGNNDKLREIKRKIAKEGITDPAKIAENEYWLKRYGHKRWSEYYVDQSGVRANKGFLRGLAAWSGLDPLKEEKGKTWFEADYGKPWLKKYSDSTIKEKPSKAQFEKEYNSGRLLNK* |
Ga0103770_1016853 | Ga0103770_10168531 | F000606 | HRYLFKFQNLLKKMKAALALIFFACVAGSMATDARNPMIEALVQQGQGIAQSVLGQLQQQILGFVQQTVGQLTSLFGSFGRFDFNAIIEQFKPLVNQLINQALGSVAGSLQGLIGGRAGIDLGAIFSEFLAGVTKPLTEIGQHFLNQGLSAVLGSLAGSRGISDLFAGLQQQIGTAVGAAQGALSGALSNLAALGSNLLDASKPHWEQLQEQLIGHGLNALGSLSETINNLHGSITGGR* |
Ga0103770_1017137 | Ga0103770_10171371 | F022887 | MEKKLNKWFAMTLDSNNDGLVNWTDFEKAIEAIVPTEDAKKNARLKILRKRVEQNFQKYFWDLCAAGDANGDGNIDLDEWLDVMNEIIKHVKDTNNFPEWYEGLHKSVFRAHEFFGTFIILLKSKILAFLTVDSFFYLDDRNILKTEFADMMATWNVGEAEAEKAFDFITDLGKKKMDYNLFSELMKKFILNETQGHPLNFGLDK* |
Ga0103770_1017177 | Ga0103770_10171771 | F000241 | MTRRTLLPVVFAGAAVTYVFSTTMSFVGSFRPAHCRGDLVPARVSAEYLERCGPKDSDVPFQSSAVTGPGADVTFKKRPFGILRYQPGQGGKGAMAMEIIPTSRYPGDPQGQAFSSGVKSGWVVKSINGVDVLNEDFGKIMDLLDDEVADPRFSKSTALALEKQGGRLAPAADTPLSISFASIPGYVYKGKELRQDGQDGFH* |
Ga0103770_1017207 | Ga0103770_10172071 | F004094 | VSGEELGHTEGTDAVASENLSHLLVGGEELLVLGVLEVVLLDVGPELLDALGAGGLLLADDVSEVGGELHGLGES* |
Ga0103770_1018342 | Ga0103770_10183421 | F004781 | TVWIQGRYLPTPATSGLSVTKILAVGGPFLQGHKVHVAPTWTTWDDQRVLEAFPSDYSVPGLIEMHYNNVGEVLQAGREGKALHVVHIKIADGTPEGLLIQVNQWTEPTEGDYINVKITMHQQPGQDGHCGNFNGDPVDDDRLQVRVRMGKNGVDPPELLFKTKTPVVEANRPNINDCPAAALENAHVVCKQREKKFIPSMACLVDVCFGGAAFAKEG* |
Ga0103770_1020499 | Ga0103770_10204991 | F000070 | VNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLGALDLRMSGVQGGLGEHKRDILKLREEVNGLTLKSASHEVDIQKNSDAARKMEKQRNMDEQNWKAQMDAVHDVLDTKVNEKPFEDLKHCVASLTKGVVKFAQVVGVFP |
Ga0103770_1022706 | Ga0103770_10227061 | F000023 | CILELATMEYPYSECKNAAQILKKVSTRLQDFEAQITAQLGNLQTDFDKKLSHVNRGASATKPLDAAGGAAGLDTMAEDLDQLKYDVGELKDLLANNKGEVNHVRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVR |
Ga0103770_1024371 | Ga0103770_10243711 | F000020 | ENEITIKDAQEAQTAVAQALTVLKEFYAKAGEATALLQQEPPAIFDSPYKGMQSENGGVIGMLEVIESDFARLEADTKAAEATAQKEYDTFMTDSKVDKAAKTTDIEHKTAKKQDESQGLIVKKEDLEGTQKELDAALAYFDKLKPSCVDAGVSYETRVEHRQQEIQSLQEALRILNGEDIAL* |
Ga0103770_1025502 | Ga0103770_10255021 | F000073 | VEEHANFRTICEEGKGKLQWERDIPQDSLDNLQSLANTDFHKNLGKIVHDIYLTAHNLFMDMPQGDHKKRAKYRFASKTLMRILPDGLKNEVEGLIAKNTITLDLYEILGQCTWGQRSL* |
Ga0103770_1027529 | Ga0103770_10275291 | F004725 | PATAGKRSGYSRASIFYGADEYIEELKRKYEQDQEIATMKQILPDEGDPNAGQHAESKDKMLRVEKNNENRSHKTGRLFPTPNKPDPMPQHLAFLFTKITPEQMMYMWRILTLIFVSQCLMVVAYCAALAMFPDYWWTCTLCFGVPFAYIAIQNIYIDHDVMHGATFPPYEWQNYITHPFADFISLPWQEFVLEHNRHHASTVDLLQQGE |
Ga0103770_1027556 | Ga0103770_10275561 | F001300 | YILLSVLLHVFVGLKRTWDMKLALAKSQGIGVLNLAISGLMLLTFMTIHLFQFRFGDTDQFGPYYVRPPPYLINFWGIPSLNLFWTDDPSVEPVGVRDIYALEFQIFKNQFWSMFYVFAVFVFMAHACWGWQKVTPVLGIPKGHVFKVEIVGYLIMIAMGAVYISFPVYVMLTEPFTGYQPAIQVPSDRVGV* |
Ga0103770_1028733 | Ga0103770_10287331 | F000070 | KVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLGALDLRMSGVQGGLGEHKRDILKLREEVNGLTVKSASHEVDIQKNSDAVRKMEKQRNMDEQNWKAQMDAVHDVLDTKVNEKPFE |
Ga0103770_1028899 | Ga0103770_10288991 | F016241 | NATALGGGWYSGGDKIWGSGEGIENVHADNVGYYNAGMAAAHAQCLDPGCALIVNPPGHRTVEVFHIHTVHFGSYGANLKKKLESATCASPGWHGGAPCAGKAAFFPGFPAVFSSAMGGGDIHSASVIAWPASCGGRGTIVQLSFGCSIEHQIRGDFNPKLR* |
Ga0103770_1029071 | Ga0103770_10290711 | F000076 | VFLCFSLSPQGPQNMAEEEAQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI* |
Ga0103770_1029407 | Ga0103770_10294071 | F016241 | PGNVGYYNSGFAAAHARCGDAGCALIVNPPGHRTVNHFHIHFVHYSSYGANLKKALESKVCRSGGWHGGGLPCGGKATCVDGFPGVMSTAMRGGSVHDASVIAWPGACGGRGTIVELAFGCSIEHQIRGDFDPRFR* |
Ga0103770_1029462 | Ga0103770_10294621 | F017489 | RVKHNAFVLSLWACIWLLGTWPLGRPLSEGWRFMFTVSFFARLGFSAAWMFITNFTHSLPWNRFLANDPARTWPLLHDIMALVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWKKVHDAAVDVLHNGLWLPNGDEETEMQKQQRKRSVLMKSSMNK* |
Ga0103770_1029706 | Ga0103770_10297061 | F004726 | RMRPSNQEYAEGKEVDGLLYQFGPFKFKLGETFGGTGNNAKLRALKKQVAEEGITDQSKIEENEYWIKRYGHKRWVAPYVDQSQGTAKTFFRGLAAWSGLDPKKEERGVTWFEADYGKPWLSKYIGTKEKGWVSEEQVQKEYDTGKLLKK* |
Ga0103770_1031485 | Ga0103770_10314851 | F004781 | AVWIQGRYLPLPSTSGLGVTKVIVVGGPFLKGHRLRVETRSAFWDGQAVLTGFPSDYTVPGFVDMHYNAVGELMQNGREGKALHIVHIRLEDGTPEGLQIQVNRWMEAAEGDYINVKITMHKQPDQDGHCGNFNGDPADDDRLQVRARVGKTGVDPSMLMFGTKTPVVEANRPNINDCPAQKLEEAKATCKAREN |
Ga0103770_1032381 | Ga0103770_10323811 | F003455 | YATGAASMVQAASQQPAMPEKFEKATGAGTSIIGILEVVESDFATSLSKEETQEADAQSEYDTITQENKVTKTIKDTDLKYKNEELKSLAKAIAELSGDKETTGAELSAVNEYYAKLRERCIAKPETYEERKIRRESEIKGLKEALTILENETAFVQRKTRHGHIRGSLTAH* |
Ga0103770_1039854 | Ga0103770_10398541 | F000631 | MQPSTASLVAFLALISAHGAEGSVLRARRAAQEPDTACGKGFENLVKGSQDYYATASVELWTHPYHTMDNATFGQEFQCWFASMCTTKCGGLPSQAAARKSELAKMCKSVEADWLKIWKMFSQEEVVWFKKSYPSSEVQGEQESTVFYKQAMETAKEV |
Ga0103770_1040493 | Ga0103770_10404931 | F000371 | SAEKKSTEGLSKPQTLDEANAMFASVNDFDQSCLKHLKILNDAATAANKMTTHKEADTEVKELNDRYLKVKAVSDEWVKKVDTLVKEWKLLDSTVNDLNSWVAKDRGTEGEQQFSLEKMESTLGELKNIFKQKEKLVENL* |
Ga0103770_1041584 | Ga0103770_10415841 | F009877 | VVGKNVLRSRLINLLKLIVKAVGQRRDLLEQQNEAANALFEALLKTFNENMTRVDKLLERLSHEKNLLSKRGLALNDSLRRAQRITKLSVKAASTKNRQCHQIKVRNARLHVATQKIRNVVAQIEEILQERFGALKTFFIERKMKFEDKQ* |
Ga0103770_1041776 | Ga0103770_10417761 | F057415 | GVMSEDEVCPWTLFLTMALTLLKGVLPHVPRMLPVLISDPEMRERVSETFTSEEFINNIESYFVQNIKNDIQAPINRQIIKSSETIMYFIDVFEGLAKSFFAANDDSGNDLGTTDNKPRSDSGLFSGSALGQVLNFAKVVYNLTK* |
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