Sample 3300007769

3300007769: Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG

Overview

Basic Information
IMG/M Taxon OID	3300007769 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125948 \| Ga0102952
Sample Name	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	456622735
Sequencing Scaffolds	49
Novel Protein Genes	54
Associated Families	48

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	15
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
Not Available	12
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4965	Long. (^o)	-122.1329	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003187	Metagenome / Metatranscriptome	502	Y
F007437	Metagenome / Metatranscriptome	351	Y
F008098	Metagenome / Metatranscriptome	339	Y
F010527	Metagenome	302	Y
F012579	Metagenome / Metatranscriptome	279	N
F012695	Metagenome / Metatranscriptome	278	Y
F019205	Metagenome / Metatranscriptome	231	Y
F021102	Metagenome / Metatranscriptome	220	Y
F023884	Metagenome / Metatranscriptome	208	Y
F026377	Metagenome / Metatranscriptome	198	Y
F027211	Metagenome / Metatranscriptome	195	Y
F030395	Metagenome	185	Y
F032367	Metagenome / Metatranscriptome	180	Y
F036294	Metagenome / Metatranscriptome	170	Y
F037288	Metagenome / Metatranscriptome	168	Y
F038836	Metagenome / Metatranscriptome	165	Y
F039975	Metagenome / Metatranscriptome	162	Y
F040773	Metagenome	161	Y
F041403	Metagenome / Metatranscriptome	160	Y
F045062	Metagenome / Metatranscriptome	153	Y
F047069	Metagenome / Metatranscriptome	150	Y
F047517	Metagenome	149	Y
F048463	Metagenome	148	Y
F051351	Metagenome	144	Y
F052025	Metagenome / Metatranscriptome	143	Y
F054932	Metagenome / Metatranscriptome	139	N
F055517	Metagenome	138	Y
F056029	Metagenome	138	Y
F056659	Metagenome / Metatranscriptome	137	Y
F059048	Metagenome / Metatranscriptome	134	Y
F060093	Metagenome	133	Y
F061237	Metagenome / Metatranscriptome	132	Y
F062264	Metagenome / Metatranscriptome	131	Y
F063452	Metagenome	129	Y
F065159	Metagenome / Metatranscriptome	128	Y
F081809	Metagenome / Metatranscriptome	114	Y
F082563	Metagenome	113	Y
F082716	Metagenome	113	Y
F083203	Metagenome	113	Y
F084079	Metagenome / Metatranscriptome	112	Y
F087388	Metagenome	110	Y
F087446	Metagenome / Metatranscriptome	110	Y
F088485	Metagenome	109	Y
F090930	Metagenome / Metatranscriptome	108	Y
F093897	Metagenome	106	Y
F097083	Metagenome / Metatranscriptome	104	Y
F103749	Metagenome	101	Y
F105828	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0102952_1000569	All Organisms → cellular organisms → Bacteria	13539	Open in IMG/M
Ga0102952_1000972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	9893	Open in IMG/M
Ga0102952_1002571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5888	Open in IMG/M
Ga0102952_1007844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3323	Open in IMG/M
Ga0102952_1010173	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2891	Open in IMG/M
Ga0102952_1010645	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
Ga0102952_1013011	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
Ga0102952_1017350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2191	Open in IMG/M
Ga0102952_1020304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2014	Open in IMG/M
Ga0102952_1023394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1869	Open in IMG/M
Ga0102952_1031406	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
Ga0102952_1032605	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
Ga0102952_1032809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
Ga0102952_1034197	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon	1532	Open in IMG/M
Ga0102952_1042023	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
Ga0102952_1045399	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
Ga0102952_1053755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
Ga0102952_1054655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1201	Open in IMG/M
Ga0102952_1055294	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
Ga0102952_1058880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
Ga0102952_1064990	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
Ga0102952_1071739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
Ga0102952_1075004	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
Ga0102952_1075221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
Ga0102952_1095423	Not Available	908	Open in IMG/M
Ga0102952_1101114	Not Available	882	Open in IMG/M
Ga0102952_1102186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
Ga0102952_1104432	Not Available	868	Open in IMG/M
Ga0102952_1105791	Not Available	862	Open in IMG/M
Ga0102952_1127582	Not Available	787	Open in IMG/M
Ga0102952_1133933	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
Ga0102952_1150242	Not Available	726	Open in IMG/M
Ga0102952_1152503	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
Ga0102952_1157769	All Organisms → cellular organisms → Archaea	709	Open in IMG/M
Ga0102952_1164534	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
Ga0102952_1168921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
Ga0102952_1184726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	656	Open in IMG/M
Ga0102952_1195043	Not Available	640	Open in IMG/M
Ga0102952_1197063	Not Available	637	Open in IMG/M
Ga0102952_1202539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	628	Open in IMG/M
Ga0102952_1217784	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
Ga0102952_1228462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
Ga0102952_1231855	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
Ga0102952_1235535	Not Available	586	Open in IMG/M
Ga0102952_1242745	Not Available	578	Open in IMG/M
Ga0102952_1290817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	532	Open in IMG/M
Ga0102952_1315181	Not Available	513	Open in IMG/M
Ga0102952_1325352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
Ga0102952_1325990	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0102952_1000569	Ga0102952_10005699	F047069	SQCVVPPVQRLGLLTSVGTPAACDGKFAQDLNALWCPTCPKPAKNPGAGATVQIQLWYRDPQNTSNQSTSFSEGLEFLTCP*
Ga0102952_1000972	Ga0102952_10009723	F047069	VAPPVKRGGLLPGSGTVGLCDGTFQQDLNALWCPLCTRPNANPGAGAVVQAQLWYRDPQNTSNQTTSLSDAIEFPVGP*
Ga0102952_1002571	Ga0102952_10025712	F060093	MANESYIGNGTALSINGEAGADYAFSVEGLADGAGRVSAQIDLGAAPRPSIYQWSCEAQFQATPTQYGTLDLYIAEAPDGDSTQISGDVGSSDAALGDVDMLRNLKPIGSVVSENAAASEKCVTSRELMTLARYISIVAYNDSGASVNATDSNFRFDLQPKYWQGQ*
Ga0102952_1007844	Ga0102952_10078442	F003187	MGGVIMKKILVIVCSAILAIGVAGCAGKAPVGKGKAPVVHTKG*
Ga0102952_1010173	Ga0102952_10101732	F047069	RQANSWGNGTSFQCVAPPVLRGGLLTGTGTSGACDGAFAQDLNARWCPSCPKPNQTPLPGVPLQIQLWYRDPLNTSNQSTSLSDALEVEVCP*
Ga0102952_1010645	Ga0102952_10106452	F047069	VERAGILAATGTGEPCSGAFAQDLNALWCPTCPKPTKNPGTGAVVQAQLWYRDPFSTSNQTTSLSDALEFTVAP*
Ga0102952_1013011	Ga0102952_10130112	F036294	MGRGSSEEAIVGVKPIADEDAVTYLRVKLSESDREVGAEGRNM*
Ga0102952_1017350	Ga0102952_10173503	F008098	MQFILGVIVGAALMVGSAYLHDTGRLKAGPAQPFVNWDTVAGMWR*
Ga0102952_1020304	Ga0102952_10203043	F081809	TSQQELSVKSLRARVAFVVALSSIALITLAAPATAAPSISGTAVLADQRFKWFYWLGVVLVAGLVLWLLATLVGYYVRVIRPKHRGREIS*
Ga0102952_1023394	Ga0102952_10233943	F026377	MNQQELTQVVDDALERFRGRDLVASAEVVDVLLDLRLLLLEVESLEQLLDEPAATPAG*
Ga0102952_1031406	Ga0102952_10314063	F047069	SFQCVTPPVNRLGLQPGNGTVGLCDGTKSRDLNALWNAKPAKNPGSGTVVQVQLWYRDPQNTSNQTTSLSDAIEFTVGL*
Ga0102952_1032605	Ga0102952_10326052	F065159	VSDDFEPTTEYPPTNWESDAVFVAPGPLSRPLANYLAMCAPRSPRSSSANRFRGRSDLVLAGVASVN*
Ga0102952_1032809	Ga0102952_10328093	F010527	MSQNAKRKEATKQAVLVELENLRQGRHARYQTLVGRFARCPKLIRAAALFAAAVDANARAYSRTPLDAPPGSLPPIS*
Ga0102952_1034197	Ga0102952_10341971	F093897	MKLGFYISIGVAIGALVVGFVLLNDIQQEKDAKTVWIQKIPTQCNDVWNAEYSEYYEINPEMKEISGEESKAILETILKNHYENQGISILDLNLEVDYYDGARCEACSCLGWDRLSIQISQNDLDGIPVSEGWEVLN*
Ga0102952_1042023	Ga0102952_10420232	F041403	MAIREQKIRGRWRLLVGSVTLGVAALGLSSCGFPSTTASTNEAPSGTNIVECRSGTITNGDVQTSSLFVAKVPAGVHPDLPGDCTVQTG*
Ga0102952_1045399	Ga0102952_10453992	F061237	MDTPEQHPPVEDGSTEEGPLVDRRAVARGALFGLCVLIAASVVEAILDRNVDNFKDTGWIYPLFVAILFGYGLGGWQAGRAAPEGGLTNGTLAGLGAFGLWIPVRIVIWLVRDEHKGLFTGHSPALRPGQLFGQIVIAAGLGMLGGFVGSRAAARARGTTP*
Ga0102952_1053755	Ga0102952_10537551	F056659	MNDETLQVFAGSAIDPEELLVLAEFAAPSHFVSDEHLRDAAENLADWTDHHPTTIHDARRLATRRDVRSSVVELLEEAAAVSGGGIRGLRLARAS*
Ga0102952_1054655	Ga0102952_10546552	F037288	MAIGLLTLALLGTLALAATAFAGYRVPGDPSFVRQHFLLALGATTLLVMAHSFIMFFLIATGVELKNMEKERGWGDSFRRRTVAMKGRVFPAMTLAIALVMANFILGAAAHTKALPAWFHELLAWSTLLACVVTLYREYRVLGENNRLIAEAARKRRAPTRSQG*
Ga0102952_1055294	Ga0102952_10552942	F087388	MARTTREIAREIMERLDRGEPLEQALTIALSGDDIDEQTRLELEVAGLRDAVVHEAFHELLEWHGNFGGLAEFLEIDEAIHRTADRIGHDFDEPTGHDDEAAPRLVH*
Ga0102952_1058880	Ga0102952_10588802	F027211	MVRTYWLVPVFYEASGNLDLRPFARTDQIEACRPRAMWLPIVRGQVG*
Ga0102952_1064988	Ga0102952_10649883	F084079	YDGIPYEKGDRVEVHPSTDLWIRGARYARVIGTSITPDDRVRVRFDVLPQRIFGGSADTFRKIR*
Ga0102952_1064990	Ga0102952_10649902	F019205	MASEGDRRVELMFDSKKSFSHKAADAADLVIDFATLGEYGLEPVEQPSRACEGRSRIGSPRSTGAWSAAIARFATQA*
Ga0102952_1071739	Ga0102952_10717391	F082563	MKAFVDIGANREFKLSEAVLVYQSGGDGAFASLHKVEQNQDGAAYLAAGEPLTTAFVRTLAEGLG
Ga0102952_1075004	Ga0102952_10750044	F032367	MSRKRDIKQFRQACKGAGLTAQERREASEALHAEKQGGHVQRDMSYGELLDWLRQWRG*
Ga0102952_1075221	Ga0102952_10752212	F045062	ILFVTLSVPLKQLAARWAEVCNEIIIRRCPICEQDSIVGHGRRRKQAHDEFHEWIWIRRGRCLLCGTTFTFLPLFSLPYTHFSLLARSRALWRRFQEQCSWEKAMPQLKSADRVPDGSTVRRWGTGLDGSQLADSFLRQMMNRVAGWLQHGKQDDRNALPLPWMVSALEGLWPLRL*
Ga0102952_1095423	Ga0102952_10954232	F038836	MEDGWTIDIDAAGDPADVDEHFDDRVAEFEHALEPWSGAVEASSDHFGARFSYDTDAVNPVQVLEEGLDIFHDAAVAAGLPPWQVVRCEILTYAEDDARGGEDDEE
Ga0102952_1099802	Ga0102952_10998021	F084079	MPKTYDTVYGYDGSGYTVGDRVELHPATDLGMRGVRYGTVTRLSLTPNDRVHVELDKRPGRTFAGSADTFRRVEG*
Ga0102952_1101114	Ga0102952_11011141	F048463	DGWPYPDALSLDPGASTVGGPVPDADDGVDLDLLELRADPHAYADLTELEYFAVSWRYGVGDGAAPHSMKELAAELGCTHAEARDVLGGALDKLRRRLLTE*
Ga0102952_1102186	Ga0102952_11021861	F083203	MSTEVAIPEAQSERFEASLEAEHAAERDLMMSLIKSIAISMPIMIAIFVLMTAIAISDKADWWVWLGLGVGLGAVAALLL
Ga0102952_1104432	Ga0102952_11044321	F052025	FGVIDPDVPAADEAARNNDRPETQAWAARLLEIVDGPPEYHHYDELYRTDR*
Ga0102952_1105791	Ga0102952_11057911	F047517	MLKALRQHPVLIGTAEVLSDAIRYVAIVLVVLVVLGQVVAALGS*
Ga0102952_1127582	Ga0102952_11275822	F090930	RDLGGAGGADVNVVVLVATDATAAPLGETARALETDDTRAAVFVGDVTTAEGRTALQEFVAELFDPGPS*
Ga0102952_1133933	Ga0102952_11339331	F023884	GTTKVCWHSHWRKLQTIPFVGNARRRNLGRIAYCESAPHRLWVTLSRVRTTTGKWEIWYLISNHSRPAKATAAEYARRFGCEEGFRDVKWELGFAQARITDIHAWARLFALFALALLAVVSLAMKLLVPGGARAVALLRRVASRRQGRWDLSWVSAMVALLKEDKSLFGYLSACIKFQLNARLAYVS*
Ga0102952_1150242	Ga0102952_11502421	F040773	MYIGLGVFAVLAAVCVFAGAVAMKRRREYGDSEGEGEMGEAEFRKYEGFDE*
Ga0102952_1152503	Ga0102952_11525031	F055517	MSAMQARLKPEHTLRYPRLSPHMWYEVSPIFPGVTTRRVDIFGRRITRIRTTRDYETVQAAHFEFRAKPVAEEQAALA*
Ga0102952_1157769	Ga0102952_11577691	F082716	DIKHMPVTFIIAPVVLISLVYIVFITSNDMIEEKEFIVSLSCPELREYTQSQIIDSKLYFGHEVFLSYAEERYDTSC*
Ga0102952_1164534	Ga0102952_11645342	F039975	AQVALTLRTVAGLETPEIARGYPYAIVTGMRAEYDPYMSPGPGGQAAAQAGQFVTFIVASWIRETGFRATTKIDAPRAEREHLAVAAGLGKLNGDGKLTAPKYGAKIYIADIIFTDLPMAADG*
Ga0102952_1168921	Ga0102952_11689211	F012579	MQTMQTPETTKVIYGVNELDLDLAGRSVRGIWKTLEQVFNIPRDAVVTVNGTRADDEYVVRPGDEIEFQKAAGVKGMPA*
Ga0102952_1184726	Ga0102952_11847261	F012695	IGHIQLVGVSPAMQAKVDLLASRQAGISFDTENTAIGLQHVFEDLYRQEGYVAVKVDVARVNPLIVSDQSIHVPYTVTIKEGGIYKLGSIDLPAGALVTRREVKKILSKEHASGRPLDLFLLAACSAYRANGYLDCSVVPHPVFNQAAHIVNYNLEITAGSQYRLAAVQFDGAPDAMAARLHAVWKMAPGAIFDESYCSNFAALAKKKDRHLAKWMRT
Ga0102952_1195043	Ga0102952_11950431	F007437	MEGSAMGSSNPRLDLYGPKTLEALGQAFDSSWVVLQARDPFRDFERDLDLKTALSLKLTALAADGVIDPVELREWALESLPLR*
Ga0102952_1197063	Ga0102952_11970632	F090930	LPDRVVVLVGTDAVALGEVARGLASSGLRTAVFVGDVTDPDGRAALEEFVAELFPAEHG*
Ga0102952_1202539	Ga0102952_12025392	F063452	VNVDPIPQNLIAVHDLLSETFTIANEDAARFGWGVAIFPRTGRFDAPVFGVVTCGGESTTLTYRLLQTLMELPVFVSGRVPATIRDGMAFGPRRSTPPPALLDQPVLHIMLTCCIGLTREDLDRTMPLESTVFAGDLKAPIILLTENRPDGWPR*
Ga0102952_1217784	Ga0102952_12177842	F056029	MSVLMSWARSTLANVENAFDRSDRWFDRMLVGTLVLLAVAIVLLFVAT*
Ga0102952_1228462	Ga0102952_12284622	F051351	VGLNPFRSQVNRRSDIVIVAVALVVVLALVLWGLFG*
Ga0102952_1231855	Ga0102952_12318551	F088485	TGAAEERGSRIADALEVPVADLRHAWEHGLPRALGLEDDA*
Ga0102952_1235535	Ga0102952_12355352	F059048	MTVWVVVVVLGIGAAAAAYAARRHTDEVEPSVREFTEFRDAISRQVDGVHGDTRTLRQHLDRQPVGPPTTAVPPRNHDRSSPTGPGTERRGR*
Ga0102952_1242745	Ga0102952_12427452	F087446	MGGGGSAVVDTYDIAVDFMDMTDEQRLWVRAEDARAGFVVEVGRYAVVGDDDADPKVARIVEISSDGNLLLEVLPGPVEAHRDVLARA*
Ga0102952_1267211	Ga0102952_12672111	F054932	QVHQALLYVELTGMVKWVMVGHDALAAAEAEAPEAQRLEVARDAWAGQEQRLQDIQQYLQRDGHGDISKPWQKLAEVAPAVLDGYIRMRESFVKPDPLSPLPKKIMELAIIAADIVQAHPWGAVRHTQRFIKDGGTVPELIEAVALAMVEDGVQGYATSGRAVIEAAENTGRTGMMASSASQGS
Ga0102952_1290817	Ga0102952_12908172	F030395	SILESATPLWARDALSTAQDNPIWEHDTEAPVVNREEEFIGVISYADLRRAYRQLTRADGADSTGELAEVTELIAIGAGSLWQSIGDLIGAERRRR*
Ga0102952_1305772	Ga0102952_13057721	F021102	VRRESPVKRRNPSGEIVWVARYTGRDGKHHIAKPAWNRGKGTFERKADAQRAIEEAYGLADRPDTLGEYAKTWTERHPRSERTNATNDHRIGRVLDVQIEGIALADWPLRELRRRHALSLVDHMLRAEGRATTGVVGILRALSVMAEDAITDEV
Ga0102952_1315181	Ga0102952_13151811	F105828	MVAYILLVALIALAVLAAVSFLGSQMTGKFNTEGSIISSAGS*
Ga0102952_1325352	Ga0102952_13253521	F103749	MPTNLVVDADGHCQEPDTGLAEWLPEKFKHLAPNRVTDSSGYSHLMIESRLAARRRWGGGPDRGAVFADHIETSRPGMTDAT
Ga0102952_1325990	Ga0102952_13259901	F097083	ENCSKLPTEIPPATIRGTITYQAPPAPASMLYFIGAEHMYPLEVPAGSPMATFELQVAPDTYQLVAFPIGSENLTNRTAAAYTTGSGIGVLTVSAGQVVEGIHLQNINSDRCVNYAFPASPDGRFPAIEENCSKLISETAPATVRGTITYQAPPSPASMLYFISGEQW
Ga0102952_1330737	Ga0102952_13307371	F062264	PKVLSDFYQVYFGFEECKVFPSGSRMVIDPRFNLAFLQSRGDVAGAVVGTHRADGAEVQRDPGIHHYGFLVDDLNQAVAKLPSSLSRGASPQVSAGVGGPEGARPAEMRFIDPWGNNVDLSSRGFLGRDETRLPGVRLLAVQVPDPDEACEFYQKQFGLNVETKLFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007769: Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences