Sample 3300007628

3300007628: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D1_MG

Overview

Basic Information
IMG/M Taxon OID	3300007628 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125926 \| Ga0102937
Sample Name	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D1_MG
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	652101080
Sequencing Scaffolds	54
Novel Protein Genes	59
Associated Families	38

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → Prevotella copri	1
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-30	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
Not Available	38
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	1
All Organisms → Viruses → Predicted Viral	5
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halobellus → unclassified Halobellus → Halobellus sp. Atlit-38R	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	1
All Organisms → Viruses → environmental samples → uncultured virus	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4961	Long. (^o)	-122.1331	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002502	Metagenome / Metatranscriptome	553	Y
F005874	Metagenome	387	Y
F008719	Metagenome / Metatranscriptome	329	Y
F009454	Metagenome	317	Y
F015277	Metagenome / Metatranscriptome	256	Y
F018106	Metagenome / Metatranscriptome	237	Y
F022817	Metagenome / Metatranscriptome	212	Y
F022892	Metagenome / Metatranscriptome	212	Y
F029285	Metagenome / Metatranscriptome	189	Y
F034100	Metagenome / Metatranscriptome	175	Y
F036102	Metagenome / Metatranscriptome	170	Y
F038111	Metagenome	166	N
F042291	Metagenome	158	Y
F044910	Metagenome	153	Y
F050177	Metagenome	145	N
F050310	Metagenome	145	Y
F056354	Metagenome	137	N
F056622	Metagenome / Metatranscriptome	137	Y
F062297	Metagenome	131	N
F062484	Metagenome	130	Y
F062489	Metagenome	130	Y
F063375	Metagenome	129	N
F066493	Metagenome	126	Y
F073153	Metagenome	120	N
F075129	Metagenome / Metatranscriptome	119	Y
F075754	Metagenome	118	N
F086685	Metagenome	110	N
F087231	Metagenome / Metatranscriptome	110	Y
F088354	Metagenome	109	Y
F089905	Metagenome	108	N
F091892	Metagenome	107	Y
F097996	Metagenome	104	N
F099239	Metagenome / Metatranscriptome	103	Y
F099972	Metagenome	103	Y
F101262	Metagenome / Metatranscriptome	102	Y
F104073	Metagenome / Metatranscriptome	101	Y
F104108	Metagenome	101	N
F104555	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0102937_1022503	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → Prevotella copri	2587	Open in IMG/M
Ga0102937_1024675	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-30	2464	Open in IMG/M
Ga0102937_1025566	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2417	Open in IMG/M
Ga0102937_1027159	Not Available	2340	Open in IMG/M
Ga0102937_1030784	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	2187	Open in IMG/M
Ga0102937_1041093	Not Available	1865	Open in IMG/M
Ga0102937_1044973	Not Available	1776	Open in IMG/M
Ga0102937_1052904	Not Available	1624	Open in IMG/M
Ga0102937_1055037	All Organisms → Viruses → Predicted Viral	1587	Open in IMG/M
Ga0102937_1067027	All Organisms → Viruses → Predicted Viral	1423	Open in IMG/M
Ga0102937_1099702	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
Ga0102937_1114861	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
Ga0102937_1115456	Not Available	1055	Open in IMG/M
Ga0102937_1123107	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
Ga0102937_1137227	Not Available	961	Open in IMG/M
Ga0102937_1144736	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	933	Open in IMG/M
Ga0102937_1145774	Not Available	930	Open in IMG/M
Ga0102937_1150752	Not Available	913	Open in IMG/M
Ga0102937_1160267	Not Available	884	Open in IMG/M
Ga0102937_1186392	Not Available	816	Open in IMG/M
Ga0102937_1187955	Not Available	812	Open in IMG/M
Ga0102937_1190587	Not Available	806	Open in IMG/M
Ga0102937_1198749	Not Available	788	Open in IMG/M
Ga0102937_1199196	Not Available	787	Open in IMG/M
Ga0102937_1252008	Not Available	695	Open in IMG/M
Ga0102937_1261413	Not Available	681	Open in IMG/M
Ga0102937_1266693	Not Available	674	Open in IMG/M
Ga0102937_1267047	Not Available	673	Open in IMG/M
Ga0102937_1274621	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halobellus → unclassified Halobellus → Halobellus sp. Atlit-38R	663	Open in IMG/M
Ga0102937_1280641	Not Available	656	Open in IMG/M
Ga0102937_1283446	Not Available	653	Open in IMG/M
Ga0102937_1284333	Not Available	651	Open in IMG/M
Ga0102937_1291427	Not Available	643	Open in IMG/M
Ga0102937_1294865	Not Available	639	Open in IMG/M
Ga0102937_1307535	Not Available	625	Open in IMG/M
Ga0102937_1313177	Not Available	619	Open in IMG/M
Ga0102937_1318413	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W	614	Open in IMG/M
Ga0102937_1319822	Not Available	612	Open in IMG/M
Ga0102937_1369717	Not Available	568	Open in IMG/M
Ga0102937_1372086	Not Available	566	Open in IMG/M
Ga0102937_1377979	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	562	Open in IMG/M
Ga0102937_1389547	All Organisms → Viruses → environmental samples → uncultured virus	553	Open in IMG/M
Ga0102937_1420603	Not Available	532	Open in IMG/M
Ga0102937_1429775	Not Available	526	Open in IMG/M
Ga0102937_1432315	Not Available	525	Open in IMG/M
Ga0102937_1440755	Not Available	520	Open in IMG/M
Ga0102937_1441708	Not Available	519	Open in IMG/M
Ga0102937_1448731	Not Available	515	Open in IMG/M
Ga0102937_1455271	Not Available	511	Open in IMG/M
Ga0102937_1456712	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	511	Open in IMG/M
Ga0102937_1460921	Not Available	508	Open in IMG/M
Ga0102937_1462561	All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-30	507	Open in IMG/M
Ga0102937_1472970	Not Available	502	Open in IMG/M
Ga0102937_1476093	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0102937_1022503	Ga0102937_10225031	F022817	MVKKKYYLPSGKMYKGATHRMNGKVHSGAKHTASSKVLSSKKPKK
Ga0102937_1024675	Ga0102937_10246755	F062484	LIGSKSKVEQYIAKVDKHEGFTGNVTKTWAEPRKHPDKELYACPKNNSVEPDTNLTEKEELPSDWSPDDETI*
Ga0102937_1025566	Ga0102937_10255668	F099972	MMPKANTGKRLLNLPQAAEYSAKSYERGFEEGRRQMLVQMLNALESLSAEIKEDIERKINENN*
Ga0102937_1027159	Ga0102937_10271596	F056354	MILSVFIALSITAVVITGLAIRGDIPELLGAAVAAIMSIVAGINALDLFVITNSGNVKDIEPQTDIALILLVIFVINLIFI
Ga0102937_1030784	Ga0102937_10307844	F066493	VSQSREWTDGVIDVADELVQEHSAEGAIERLQRRKESTRSDDLEARCREAIDWIESEVQGDD*
Ga0102937_1041093	Ga0102937_10410935	F073153	MSEQDMPVRDEIARIDGNIEGILTRLSQQGESVARLDLLVEEMKEMNQQLEHIEIRLNTLEGRIE*
Ga0102937_1044973	Ga0102937_10449733	F042291	MPVYQAYNGRIKAWVKYHFVKDGRVEILNVKQREPKKPFKGIPKKGKKK*
Ga0102937_1052904	Ga0102937_10529044	F086685	MIELTSIPLVLWAVACAAFVIVGHELTHYIAWLPVATSIEYHFEEQYIEAEYPDTPFARKWAAVAGISPIIVAIGLVLALIAIGWDPAASWHHITASAAVVLYGISGGKSDFVALFSLVQRLRSPAPRD*
Ga0102937_1055037	Ga0102937_10550371	F038111	SPQQHASIPSTELHYQGMIHRVPVVNKDNYTIWLENYKNIANFIHAEVYKYNKTTREDFGKDLDKLMGLHQNPLYVLVETDNKKLKKFMNIYGLTLDHKPLCDDGIEREVYRLDRRV*
Ga0102937_1067027	Ga0102937_10670271	F056622	KIDNMASCLLSILDSLKLYDEGSLYTEDETLSEMMFRKMKAHGIDLNKELGFTHLQPVRSKQSKK*
Ga0102937_1099702	Ga0102937_10997022	F009454	MPNFEEIEAAILEVQQPRSRFQLERFVIGQHKTEEMQFYQTCIELQDMIYKYQSAKLNVQKQELKIKRLRETGDELKELKAQELELGLKQTYIAMQGAEREMLALTEIFYSFPKRYTREEIEAAQPDYWDERLTGNAKAQLMGGSGVNPAHIEAMEQAGVLDKLIEEVQESKRELGL*
Ga0102937_1114861	Ga0102937_11148611	F038111	MIPSRVPVVNKNNYTIWLENYKNIANFIHAEVYKYNKTTREEFGKDLDKLMDLHQNSLYVLTESDNKKLKKFMNIYGLTLDHKPLCDDGIEREVYRLDRRV*
Ga0102937_1115456	Ga0102937_11154563	F005874	MAMIPNDPPDDELTPRQLYDRFEDAVNLDVDELRAFKTSEYNEAYNSMKSEAAQPGDEPLDDVIRLSETPASMWRDVYDGFNEVEEARELLDFQRRTQAQIKSQGLGENYLTEARNMQKREAASIRWGIDPDDEREWL*
Ga0102937_1123107	Ga0102937_11231071	F101262	RSADARANAQQTRQRDSDRTANQSDGEATLEGRNPQGEGRSSE*
Ga0102937_1123776	Ga0102937_11237762	F104555	MSNRLDEIMSDPLGGEHLAALPVTDDQTIRQAIRHSIATNGIHNAGEHWAAVLDTIGPVPKAHLDTIKVIFNQEVSACF*
Ga0102937_1137227	Ga0102937_11372273	F005874	MGYGIPDDPADRDLTPQQLHDRIDEVTNLSADELRAFKDSDFNEAYNMAKSDAAQPGDEPLDDVIRLLETPASEYRDVDDGFNEIEEGRELLSFQRRTQAQIESQGLGENYLTDLEVMQVREAASIRWGIDPDDEREWL*
Ga0102937_1144736	Ga0102937_11447363	F018106	MTKRLSKTEAQKILGVAGDNTQNGQIRSDEFLPELRG
Ga0102937_1145774	Ga0102937_11457741	F008719	FAWNNIPGANNLGVSVESFSDDALKRQQVAEHIQVKMSYDMKVVGADLGGFINSAIS*
Ga0102937_1145774	Ga0102937_11457742	F097996	MAINREGMHPRYLGFQVDWPVFVKIPFTADGKQWKKSEHFNWAERNIDTKDAASLYAQGFIYHNTELNKANKVGDRLSEMNAEDLRTVVTQLNAIVKDRTSSNQEFNNKKCKQSKIEDKQRGLIRRFLNHNPWITEKFYEIRDTILGE*
Ga0102937_1150752	Ga0102937_11507522	F086685	MIDITTIPLVLWVLGCITFVILGHELTHYIAWLPVASSIEYHFEEQYIEAEYPDTPFARKWAVVAGISPVIVATGLLLALIATGWQPTATWHHITASVAVLLYGISGGKSDFDALFNLVRTLRATS*
Ga0102937_1160267	Ga0102937_11602672	F005874	MRMRARKATMAMIPNMPPDDDLTPAELYDRVEDITNLTVEELQAFKGSEYNEIYNARKSDAAQRKDEPLDDVIRLLSTEPAEWQDVDDGFNEVDEAEELLNFQRRTQAQIASQGLGENYLTEEQDMTMREAASIRWGIDPDAQREWL*
Ga0102937_1186392	Ga0102937_11863923	F050310	VTLVIGIFISSEIADQMDTGSAEANAANDLVTALSGGSAWITILVVVGFATIVLSMLTSGLGGSSADVGPVY*
Ga0102937_1187955	Ga0102937_11879551	F002502	MENTLTVGSQFTTAKSGVTGTIQEVVKNNNGSSRVRLELANGDTRWTTVIKK*
Ga0102937_1190587	Ga0102937_11905871	F050177	PPDDALTPQQLADRVDDVVNLTVEELEAFRESEYNEEYLEYNSERAQRGNEPLDDVIRLLDTPRDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGTNTIAEYDDMTFREAASIRWGIDPDDEREWL*
Ga0102937_1198749	Ga0102937_11987492	F056354	MILSVFIALSITAVLITGLAIRGDIPELLGAAVAAIMSIVAGINALDLFVITNSGNVKDIVPQTDIALILLVIFVINLIFIFDRAFSPGS*
Ga0102937_1199196	Ga0102937_11991961	F005874	ELYNRVEETVNLSVDDLFAFKRSEYNEEYNARKSDQAQAKDEPLDDVIRLLSTPPEAGKDEDDGFNEVQEAEELLDFQRRTQAQIASQGLGMNFLGDDQDMTMREAASIRWGIDPDDDREWL*
Ga0102937_1252008	Ga0102937_12520082	F034100	MQLVKIEQQFEENPYLTVPIQENLLYDLPFKDFDKDGYEVPSPLEHLHYIENWVPLNREIQFHIAPVKPWYEDVEESEFGLVLDHCMLLSRWAFAGEARAKIEQAAKERPILNKLLSIRP
Ga0102937_1261413	Ga0102937_12614131	F066493	MSQSREWTDGVIDVADELVQEHSAEGAIEHLQRRRQASDDELQARCNEAIAWIRREVQSDE*
Ga0102937_1266693	Ga0102937_12666932	F056354	HGGVRSHTEAPIMILSVFIALSITAVVITGLAIRGDIPELLGAAVAAIMSIVAGINALDLFVITNSGNVKDIAPQTDIALILLVIFVINLIFIFDRAFSGGN*
Ga0102937_1267047	Ga0102937_12670472	F099972	MPKAINGKRLLNLPQAAEYSKWSYERGVEHGRREMQAEMMKALEALSTEAKEDLERHLNDL*
Ga0102937_1274621	Ga0102937_12746214	F066493	MSESREFDDGLIDVADELVSEYSAEGAIDRLQRRRESTRSDELADRCLEAIA
Ga0102937_1280641	Ga0102937_12806413	F089905	MRTVKEIEQDIREAEEAQAETEFSSVGWDFLNAEITGLHAELKRATYHWDRLKLCGMMGVDTYGR*
Ga0102937_1283446	Ga0102937_12834463	F022892	FANNIGVVIIIFPPNIVAIQLKIFTPVGIAITIVAAAK*
Ga0102937_1284333	Ga0102937_12843332	F029285	MHLVAVKLRQMKNKADYNKYECPYSHLEKESGHELHGPEGYQDVYGVWCACGFRAPVFYLDPDELGLKLKKKTDIATCA*
Ga0102937_1291427	Ga0102937_12914271	F063375	MTAVDISPRQLALIETVGGHLQTVIAYGGVFMGGVIIGFESSDYPMMWPITQSYTGKAVTYPYTQLLEMGIGILAVCVMMIILLEWVVYLHER*
Ga0102937_1294865	Ga0102937_12948651	F066493	MSQSREWTDGVIDVADELVQEHSAEGAIEHLQRRRQTSDDELQARCNEAIAWIRREVQSDD*
Ga0102937_1307535	Ga0102937_13075351	F104073	QIDLSEVSEDATNLRDMMEGILERVSSVFQSYNVELPARKYWAMGQPAIDCEQLVVYFEQMYLGAPGSQIGEPQRCNVPRSATVTVQISRETPIVGQNGRPPTPEKIQSASEMMAIDSWVLMESINQLDQWDETGYGVGVIATLESASPEGGFQTTNLTITMAVP*
Ga0102937_1313177	Ga0102937_13131771	F075129	MNSTVPSEFANFDALVRKVLAVPAETIKARVEEHRERAARNPNRPGPKPKKVKPSASGRASRDQD*
Ga0102937_1318413	Ga0102937_13184132	F062489	MGPEAIIIRERVADGPTRRLVYHPLTTGGYERREQLWRLSIEGWHTTGTEIVEERAIDAPEGER*
Ga0102937_1319822	Ga0102937_13198221	F099972	MPKANKGKRLLNLPEASQYSAWSYWRGVEHGRREGRAEVLKALESLSADIKKDVEN
Ga0102937_1359922	Ga0102937_13599221	F086685	MIDITAIPLVIWVIGCITFVIIGHELTHYLAWLPVATSIEYHFEDQYIEAEYPDTPFARRWAAVAGISPVIVAIGLVLALMATGWN
Ga0102937_1369717	Ga0102937_13697171	F075754	VISYQAGIRWHTPVNPWEPIHARVDDTSEWYAAQLERSEYLRDTEEDADMHHRKGGVVAEGLVKAIFAGMEWWDTHSFDTFLGGTRYDIISRGLNRGEPRQHYVHKIQAKKEERAKPSTHYYAVVRNHPDYWLIGHINSVRFWYLCDRSAPEFWDDEQFDGGFLSYEHFEQLPVAEPISPPP
Ga0102937_1372086	Ga0102937_13720861	F042291	MPVYQAYNGRIKAWVKYHFVKDGKTEILNVKQKEPKKPFKGIPKKGKKK*
Ga0102937_1377631	Ga0102937_13776311	F099239	MSLYNTYNNEDIISRAVIAGMLDVLNNNIKYNQVWSNEEIEEIEIPWFYNQSGDERFMQDFYTHYADCNFPKPVDGNFDRIPRGVITYSGSAIDANRITNRFVQGRYVKEID
Ga0102937_1377979	Ga0102937_13779792	F018106	MAKMLSESESKQILGVAGDNTRNGQIRADEFLPELRGKRAIKKFR
Ga0102937_1389547	Ga0102937_13895472	F088354	MTNTPRAELDVDRFETTTVNANGQIYLGRDLEGAKVHVAIEVVTDDDEN*
Ga0102937_1420603	Ga0102937_14206031	F036102	MERQEMMELFRATADINTKEGMAAYRAFAAALTTPILQKVELDSIMRNLFTVERLGPGAQAVYPVAEDFEIPVWVLPGLGYVAQNFIEGIGEEVYVPT
Ga0102937_1429775	Ga0102937_14297751	F097996	MAIIKDGMHPRYLGFQCDWPVFVKIPFSADGKNWKKREHFNWAERDLERKDVASLYAQGLIYHNTELAKENKVGDRLSEMNTEELKSLVTQINAIVKDRTTSSQEYNNKRCKQSKIEDKQRG
Ga0102937_1432315	Ga0102937_14323152	F044910	MLQDAHSKKTSKAVAAEVGTNIIVEAQDDAYIYVHELIGDLAADGNLTIMAGDRILGAFALEAGQGLTEQDEPGMDGVPRFECKPEEAFKLVVTGGTFKGSIDYSFRY*
Ga0102937_1436220	Ga0102937_14362202	F104555	MRDDNPDNMTAFERLDWILGSPFGGEDLAALPVSDDQTIRQAIRRSIEHNGIQATGEHWAAVLDTIGPVPQLYLDTVKVIFNQEVGATF*
Ga0102937_1440755	Ga0102937_14407551	F087231	LNPEALENVRNTSKELGEVIANLPFAFGEQAQKIRYSDVPPALQKLIEDMISRVEDKIGPEDADVATADLKNFMAGGDYYNQSEISSQMAKLLRLLT*
Ga0102937_1441708	Ga0102937_14417081	F104108	VLYLQKILIMGQTKEMALQLRAETFEKLNFAQDFSKKEAKEQGRKIAKDILDNGNANPVEMMATLVRLSEVINSFQSELKQRLNVQEEIKLNGVNFKNRQGYPIYDYAKDDMV
Ga0102937_1448731	Ga0102937_14487312	F062297	RVMSMDDLERCPRRYTVLAERVEDGRVVEQSVTGQSRAEELFERWDEGEQLCNLRVKAISAPMDDVTRHFEHDWPPTNNSPVSSDGGASGWETR*
Ga0102937_1455271	Ga0102937_14552712	F062489	EEVTAGPTRRYVYHPLAAGGYERKTQLWRQATDGWHTTGTVVVEPLASDCPEGRR*
Ga0102937_1456712	Ga0102937_14567122	F091892	MRIFCIIKLGTMVHGLTEILTLGNAYAVSYWIARLFGKEDCGCYQRELWLNGVTCKDDCDD*
Ga0102937_1460921	Ga0102937_14609211	F015277	MEKFLSIPVTDEQNQLIPATGVALVEQGSTTTVVVNYLSGAVLTLTHATAGSGDETERDAIQDAIVAALKTKWNEPTYQVDNLPYAVSGIAFALADQGTGA*
Ga0102937_1462561	Ga0102937_14625612	F062484	MTWLIGSKSKVEQYIAKVDKHEGFTGNVTKTWAEPKKHPTKSKYACPKKEGIKPDSDMEEVDELTDDWLPKDNVDD*
Ga0102937_1472970	Ga0102937_14729702	F066493	MSESREFGDGLIDVADELVKEYSADGAIDRLQRRRESTRSDDLEARCLEAIAYIRREVKDDES*
Ga0102937_1476093	Ga0102937_14760933	F099972	KRLLNLPQAAEYSAKSYERGLEEGRRQMQAEMMQALEALSAEAKKDIERKLNEKQNNN*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007628: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D1_MG

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences