Sample 3300007615

3300007615: Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007615 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0125881 \| Ga0102773
Sample Name	Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	147792302
Sequencing Scaffolds	44
Novel Protein Genes	48
Associated Families	37

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	10
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2
Not Available	21
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium MedDCM-OCT-S08-C235	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Archaea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic Ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F001504	Metagenome / Metatranscriptome	681	Y
F002923	Metatranscriptome	520	Y
F003068	Metagenome / Metatranscriptome	509	Y
F003423	Metagenome / Metatranscriptome	487	Y
F005911	Metagenome / Metatranscriptome	386	Y
F006052	Metagenome / Metatranscriptome	382	Y
F013356	Metagenome / Metatranscriptome	272	Y
F017397	Metagenome / Metatranscriptome	241	N
F018182	Metagenome / Metatranscriptome	236	N
F021310	Metatranscriptome	219	N
F023212	Metagenome / Metatranscriptome	211	Y
F023863	Metagenome / Metatranscriptome	208	N
F024093	Metagenome / Metatranscriptome	207	Y
F028521	Metagenome / Metatranscriptome	191	N
F029471	Metagenome / Metatranscriptome	188	N
F035957	Metagenome / Metatranscriptome	171	Y
F037241	Metagenome / Metatranscriptome	168	N
F041790	Metagenome / Metatranscriptome	159	N
F042354	Metagenome / Metatranscriptome	158	Y
F045994	Metagenome / Metatranscriptome	152	Y
F048556	Metagenome / Metatranscriptome	148	Y
F049701	Metagenome / Metatranscriptome	146	N
F051160	Metagenome / Metatranscriptome	144	Y
F051931	Metagenome / Metatranscriptome	143	N
F052196	Metagenome / Metatranscriptome	143	Y
F052625	Metagenome / Metatranscriptome	142	Y
F060038	Metagenome / Metatranscriptome	133	Y
F063769	Metagenome / Metatranscriptome	129	N
F066695	Metagenome / Metatranscriptome	126	Y
F070193	Metagenome / Metatranscriptome	123	Y
F072425	Metagenome / Metatranscriptome	121	N
F090441	Metatranscriptome	108	N
F090442	Metagenome / Metatranscriptome	108	Y
F092219	Metagenome / Metatranscriptome	107	N
F093978	Metagenome / Metatranscriptome	106	N
F101265	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0102773_1002763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
Ga0102773_1003450	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	707	Open in IMG/M
Ga0102773_1007237	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	963	Open in IMG/M
Ga0102773_1008907	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	541	Open in IMG/M
Ga0102773_1008917	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	679	Open in IMG/M
Ga0102773_1015830	Not Available	962	Open in IMG/M
Ga0102773_1020929	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	711	Open in IMG/M
Ga0102773_1021654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
Ga0102773_1025084	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	703	Open in IMG/M
Ga0102773_1028215	Not Available	530	Open in IMG/M
Ga0102773_1034282	Not Available	959	Open in IMG/M
Ga0102773_1040332	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	560	Open in IMG/M
Ga0102773_1208026	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium MedDCM-OCT-S08-C235	541	Open in IMG/M
Ga0102773_1214812	Not Available	751	Open in IMG/M
Ga0102773_1238678	Not Available	684	Open in IMG/M
Ga0102773_1256108	All Organisms → cellular organisms → Eukaryota	927	Open in IMG/M
Ga0102773_1261152	Not Available	523	Open in IMG/M
Ga0102773_1279807	Not Available	980	Open in IMG/M
Ga0102773_1302630	Not Available	529	Open in IMG/M
Ga0102773_1304932	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
Ga0102773_1311670	Not Available	585	Open in IMG/M
Ga0102773_1316058	Not Available	1228	Open in IMG/M
Ga0102773_1321597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
Ga0102773_1322921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	879	Open in IMG/M
Ga0102773_1335416	Not Available	746	Open in IMG/M
Ga0102773_1339568	Not Available	570	Open in IMG/M
Ga0102773_1344659	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	505	Open in IMG/M
Ga0102773_1347666	Not Available	511	Open in IMG/M
Ga0102773_1356625	Not Available	801	Open in IMG/M
Ga0102773_1356847	Not Available	763	Open in IMG/M
Ga0102773_1360935	All Organisms → Viruses → Predicted Viral	1024	Open in IMG/M
Ga0102773_1365410	Not Available	651	Open in IMG/M
Ga0102773_1365819	Not Available	788	Open in IMG/M
Ga0102773_1373396	All Organisms → Viruses → Predicted Viral	1433	Open in IMG/M
Ga0102773_1378461	All Organisms → cellular organisms → Archaea	854	Open in IMG/M
Ga0102773_1409558	Not Available	704	Open in IMG/M
Ga0102773_1413904	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
Ga0102773_1415168	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	768	Open in IMG/M
Ga0102773_1425463	Not Available	2836	Open in IMG/M
Ga0102773_1428945	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	785	Open in IMG/M
Ga0102773_1429407	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	896	Open in IMG/M
Ga0102773_1433995	Not Available	748	Open in IMG/M
Ga0102773_1443133	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	586	Open in IMG/M
Ga0102773_1444097	Not Available	903	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0102773_1002763	Ga0102773_10027633	F005911	MSLKQRLLKLLKSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQALKAKIDGADINQARLGSGTEDDLEAPIDDVFHNGKFISLKVMVKKAIIIAADDPTATARAGSDMPYDLENSGVLIKYADADGNVIAATETGSGTDTIVADVQLFVNLAGTPDANSNSPYTDGDPFYYILMETANSGLAADDITVNLVQFPAGILATNDGGPQAEVSVILPQDDEE*
Ga0102773_1003450	Ga0102773_10034501	F021310	RTLLAKLVFAGSARLAECGLGIDELRAAFKRAHGEEASKGTLTYQLNENDEDALQLLDDADLALAKKHGSEPLKITSTEVDSRNVFDHASAELAKHGLDAPPTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAKGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVTAKGIKLDANTLHALLRMLHCRPARFVKLGLVEDVKAARQAYKLGGRAC
Ga0102773_1007237	Ga0102773_10072373	F013356	GEHIICNFGQIREEVDGEQKFVAYQLLYPLSLSLSEGDEGQFNVTYRRWNPYTPYEDHRINPTSVLSAMPPAEDILQNYVGKLAEANIDLSFLPNNGKDILGTTDGEPTQEPTGAATEGPVATGTGGGN*
Ga0102773_1008907	Ga0102773_10089071	F049701	RPWDKSEYTELYDLMDQAKRFEVIEDDEFKMTIDYQNMTSTFEVK*
Ga0102773_1008917	Ga0102773_10089171	F041790	AVVSGSLTFGATRDDDDEEGCLMRSGDDRFSSSYATSSQKTDATISARVMSEGSIRRDYGLLLRVTDDWDDSFRYQPRAGYRCTVNTGRDGKADSTLSVEVLREDGSRSTVASYAPAFALEPGTWYTVSASAVGNRITCQIMRGDWVLGSAEAVDDTYGDGYFATWNYKDDSGPHWWGDLRVVDAPPPAARRLRGWR*
Ga0102773_1015830	Ga0102773_10158302	F072425	MNIEFSKSSMLRSPIVIDSEANTATLTYNNGNAYTYNFNESFVGDLRETINKTESVGKFILAARADQRLTQVVNS*
Ga0102773_1020929	Ga0102773_10209291	F023863	MAVRRILTVLALAGLTSAQNPWVNRRKNKDKDAPVAADPAAGDTDFSKLNDMVKNLQQAGAAGGAGGEDMFAGMGDMWESLMDSPEMEEMLANPELLKATIKNNPLINAIPGASEQVEALLQSDAFNDPAQLKQAMRQGVDAMKAVGSEFGSQLGAQMKLAQQNPEAFKAQMEAMMSQLAGGPEQGRA
Ga0102773_1021654	Ga0102773_10216541	F092219	MKKFITALAATFATVVIGSAASAATPTFNVYHEEVLPALVETNAPATFSVYHEEVLPALVAANTPPTFNVVREEILPAMNRAVASMPVTFAEVYGDIVYHEEVVPVADADPFSEHVVGGLGPQLPYDPMRGVDYGFVQALLQQNADPFAEEIVGGLGPQGDIDPFAEEIVGGLGPQINFVAGN*
Ga0102773_1025084	Ga0102773_10250841	F021310	TMTSNNISMKDTRDGVVVQADGRTLLAKLVFAGSARLAECDLGIDELRAAFKRAHGEEASKGTLTYQLNEQDEDHLQLLDDADLALAKKHGSEPLKITSTEVDTRNVFDHASAELAKHGLDAPPTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAKGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVTAKGVKLDSNTLHALLRMLHCRPAR
Ga0102773_1028215	Ga0102773_10282151	F101265	EISGLKLATDLRLKRIYHCRVTDVGEDYVLRIIILKSIGGLIVKANFSEIAETN*
Ga0102773_1034282	Ga0102773_10342821	F090441	VWELATLSFPDSLALGALITRRVIVGCQLPDAASYRKNDCDTFRSHSGT*
Ga0102773_1040332	Ga0102773_10403321	F018182	HPFGQVETTKRKRKKKRTTKQATMNSSNISMKDTHDGVVVRADGRTLLAKLVFAGSARLAECGLGIDELRAAFKKAHGEEASKGTLTYQLNEQDEDHLQLINDADLALAKKHGSEPLKITSTEVDARNVFDHASSELAKHGLDAPSTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAKGDEAEEP
Ga0102773_1118345	Ga0102773_11183451	F070193	NGFAQIRSNFIRAVATQSGVGSSTASLAQFSQSVANLRSQNAPADVGGFYYAVVTPAQELALASELNGVGGIAGGAISSVSQDLANQALLEGLIGQAVGLRFVRSNNLPSGIASA*
Ga0102773_1208026	Ga0102773_12080261	F060038	MAYATSNPIKKISQMGDSNALWYYTDGDAIGTIDDADYFLTDYVLLSAG
Ga0102773_1214812	Ga0102773_12148121	F005911	MLKSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSLSEDDLEAPIDDVFHNGKFISLKVMVKKAVIIAADDPTATARGGVDTPYDIDNSGVLIKYADAAGAVIAATDTGSGTDTIVADVHLFVNLAGTADAGSGSNAPYTAGEPFYYILMDADTASLTADDNTVNLTQFPTGILATNDGGPQAE
Ga0102773_1238678	Ga0102773_12386781	F005911	MKVKTKLLKMLNTKKGNALLLATAGTIAATFGVYFFVTLTTLSEDSKQRVAHLYNAYQMGQAIKAKIDGADINQARLGSGTENDIEAPIDDLFHNGNFVTLAQMVKKAIVIIADDPTATARSGSDQAYDLINSGALIKYADAAGNVIEADSDDGSDSIPVVTDVQVFVNLAGTADATTNTPYTAGEPFYYILMDADTAGLTASDITVDATQFPTGIL
Ga0102773_1256108	Ga0102773_12561081	F090442	EATVFQALYASGKSGILLGIPAKPKKCIGKKQRLTPIKVVQKCICPRTSL*
Ga0102773_1261152	Ga0102773_12611521	F003068	SLVSFNAYAVDVSQLSVTAGVAHNSAVYGASAKETNRNESNVVKTVDKESGVFTESHQSFFMELNAGEFISLGFEHTPDSITTPENQRITNTNATTKVKVDFNDLNIAYVKLNVPGGLYVKAGVVETDLDIKESMASGSTYNNVSTEGTLLGVGYSRDLGDSPFSIRVEGSYME
Ga0102773_1279807	Ga0102773_12798072	F028521	MPTYTSGAINEVLIGTGVLYVADRTTSGLAFPGDDGSGNWQSVATASAAWRDIGYSEDGWTLEMDRTFEDILVAEEVDPIKTIKTAQEARLMGELSQASLANLSVAMGQIDSYVSENDGDFAAGYDVVKAPITDSFSEMAALLIAEGPAGADRHVQMPRTVSVGAFSMSHAKAPQKVVIATEFKLLVPDSTFNVGATGGKNHLFKIVDNTNDSQTFDVN*
Ga0102773_1302630	Ga0102773_13026301	F042354	TTAFSQASVNVGISYGSFNYEVARTTKYTVDGGVVSLDGQLSPAISYSLNISDGKRGVVFSDNQGSITYNIYPNIGVHFMGSQIKLASVQETDTSLGLSYNINASSIGIQFFAGSDIKNYGKFYTYGTQVELGVTSNSNLTLSYKTEDRKQKLTSMGLEYVYGLTSNLGLNFGYKS
Ga0102773_1304932	Ga0102773_13049322	F035957	NKPVYFDDLTLEEMFKYHDHTYMMSDDNRYYESGRRERDIIEDKVESQGGWTKELCEIYNKYAPEGFEKDWEWMQQYK*
Ga0102773_1311670	Ga0102773_13116702	F052625	MSPETALLYDTWDSIKSYVSSKERLHVAEELVRTFDDNVDISDVEEHLNSFDKVMKAALVSHFEFGFEKDEDEEEWEY*
Ga0102773_1316058	Ga0102773_13160583	F052196	MGRVFFDTKVNIVDVDAAKVLTNADSGTTFIINQASAYEITLPLMSTIDRGWNATFIIGTANTNAVTIANNTAEDTIVGGVAGADGGAATHAETAVDEVVFISGAVLGDRVTIVSNGVNYFVSGYAADVAHITVS*
Ga0102773_1321597	Ga0102773_13215971	F003423	MENEFDAPAENGVKQMRETIDRKDESIKKLEAELASYKEKEIDSVFGQLGLSTDKGFGKALKQVYDGPVNAEAISQFAKDEYGFEPATEVKEEPQPEQQQVVQDDARSRVAALDANSQSDVPLGVEEQLEQIIAKGSTKDSIRAPYSFFTQGLRAST*
Ga0102773_1322921	Ga0102773_13229212	F023212	TEEGWDVNDPGYYDEMDKRLKSSGLAYFTKSEENTTQTEKNVVQKNNRVQSPVAGVSRKKTSDSNRVKLTQDDLATARNFGIDINDEAALKRFAKEVKNFSTNT*
Ga0102773_1335416	Ga0102773_13354161	F005911	KKRGKITMCLKTQLLKMLKSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKAKIDGADTNQARLGAGTEDDIESPIDVVFHNGNFIDLKTMVKKAVIIASDDPTATARSGTDTPYDLLKSGVLIKYADADGAIIAPTTHGSGTSTVVSDVHLFVNLAGTPDATTNAPYGATDPFYYIVMETDNSGLTAGDITIDLTMFPAGILSTNDGGPQAEVSVILPQDTED*
Ga0102773_1339568	Ga0102773_13395681	F042354	GLSYGSFNYDISGTKYTGDGGVLSLDGQLSPSLSYSLSMSDGKFDDVVFSDSQGSLTYNVYPNIGIHFMGSQIKLSTVQETDTSLGVSYNINTSSLGLKVFAGSDINNYGKFYTYGTKINLGVAQGSSLVLGYKTEDRKQKVTTMDVSFVYDLTSSLGLNLGYKSTETKNAAGTAVVLKGNTTYAGITYR
Ga0102773_1343754	Ga0102773_13437543	F045994	MAELLTDDIIIEKLNEDGIMQEPDGPWLLEYIYENYGGQLDTTSDFVDDKWTLKIYSESTYDGYDIFWCTYEDRPYVSQDG
Ga0102773_1344659	Ga0102773_13446591	F037241	LYKMRRLLLPLLLASTTAAKSTYWKEVEAKKRRPAAAAYCPKRCFTTEASGDERREAADLTCCSSAQGTIFELAAFVAATTETAVRGFSLGFGYVLVKATLRAADRDEGPRSGHDFGPAYRFARMAGLGVACSFVGLSMFVPVGLRLGHRLA*
Ga0102773_1347666	Ga0102773_13476661	F001504	MSYDSEHYYAVQSFLEDDELHKIWNIIEIAMEREGYDVSNAELSMKLYDPELTQTIGFYNK*
Ga0102773_1356625	Ga0102773_13566251	F006052	INATEFVGYNDNHVAIFASDGSMESDHALNEHFAATPSIPNLADGRNHTVMIKYWPQLTDPGKEHDGVYNRTNKKLRGAIHTANIPTCGDCQDEKSGTKFATPDQCYPCERVNTRPGNLAIFVDDMKRPVLQTAMSLRKGSTQNCFDKDKDRCVLDAVGNAYIGFTAATGGERAQGRNTANVHSTTTGTNPTALENANKMLGAAQNHEIIDWKFCNTIGCVEV*
Ga0102773_1356847	Ga0102773_13568471	F048556	TGKTIHVFQSSKDLNKVTRIKEFFDNLTATEYFTGTWTTDNNRDMTVAVGNNGWVGFGHKNGNSMRYSAFNCNLGQSLGTTDTGRQYVGWQDFAGSTTTSYGANQGAQYYTKFHTTWDGTWGMIFSPYYYYGCGLNAFCMSIENPRKFISVNQTKSDRSNPYLAWGRTGFHGGWAENTDGEQWRTYAFAFDPTDSDHTVDTQVYYGGTDNNDVIRDDNNARADAITNKTGNYSINISRTGLHGGSHTTCYPAM
Ga0102773_1360935	Ga0102773_13609351	F063769	EVHYTMDENSGRSDWSGMGGWMNASHGYNLATRSPTRGGPYTACWTGNRSCGCYQANGRNPFMPAGLGGQGPTPCDGVRDHAHMGGPGMIRIKFISDTNDYDLPSAP*
Ga0102773_1365410	Ga0102773_13654101	F029471	MLASEVNSADYSDSRLDAMSDVLDSVDIKEGVKTLFRTMITPFAQEKDWAMIAEWNANSIIGCFERHLEQCNNSLDKTMKLMENALREDVGNEISKLNVDKLIFRRDAQQLNINRAETIVNELHLAYEVAFEKKFIPKSKQAGAVKDVSDEMKQ
Ga0102773_1365819	Ga0102773_13658191	F005911	MSLKNRLLKLLKSKKGNALLLATAGAIAATFSVYFFVSITTLSADSKQRVAHLYNAYQMGQSLKAKIDGADINESRLGNGTEADVEAPIDEVFHNGKFITLKQMVKKAIIIASKDPTATERSGTDTGYDIVNSGVLIKYADAAGAIIAPTDSPDDATDTLVSDVHLFVNLAGTPDVEFENKPYQTGEPFYYILMDNTSASLAADLLTISTTQYPAGILETKDGGPQAEVSVILPQDASQ*
Ga0102773_1373396	Ga0102773_13733962	F051160	MAKVISATTGEASESPKLVSIKHTRVMKNPNGNNVTVLDYEETKDVDIAIADAEAQKASLEASLAEVEAELVEYKAIKDAD*
Ga0102773_1378461	Ga0102773_13784612	F066695	MAELLTDDIITSALVDDGIMEEPDAPWLLEYIETEYGGKLDNTTDWLDDKYCLKIYSESTSDGYDIYWCTHDVKPHVCQDGYYYEDYTKWSEETIEQLTSGDKVWIEPHIWSDMEYEFNHELEQWWSDIYEDKFNDKKDELLDSDEYYYEE*
Ga0102773_1398560	Ga0102773_13985601	F000023	RQSGAQTDAQILKKVSTRLQDFEAQITAQLSNMQSDFDKKLSHLNRGSSGVKGMDTTTSVAGIETVVEDLDALKYDVGELKDLLNNNKGEINHVRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQE
Ga0102773_1409558	Ga0102773_14095581	F042354	MKKSNPFVILVALLLSATSAFSQASVSAGLSYGSFNYDISGTKYTGDGGVLNLEGQLSPSITYSLSMSDGKFDDQVLSNSEGSITYNVYPNIGVHFMGSQIKLATVQETDTSLGFSYNINTPTFGINVFAGSDINNYGKFYTYGTKINLGVTRGSSLILSYKTEDRKQKATTMDARFVYDLSSNLGLNLGYKSTETKNAAGTAVVLKGNTTYAGIIYRF*
Ga0102773_1413904	Ga0102773_14139042	F024093	MGAIKQIHIVAKEIAEDITKQINKQCDWQVDQFLPPNSEGKIIDEAHSYMARTVARHVANAFDVNTNKYYDE*
Ga0102773_1415168	Ga0102773_14151681	F051931	DGHFELRGWKYALHVLFVLMMTIMGTSAWVTFLPGTGVNKDPLPPTMREVEDHMELNAETQNPLCLVAFSISASEPRMMVLRNLVGKMMAWVVRRKFVFESQAMTQKVQLFEEESSLKHLHSPTRVRISEDTNMAYTERLKAFYAKYDPHKVDGVFALLKKYKGKEEELMEELKHKYGPEPPPRSQRELRRARKESSQTISAERRLDEYVEMIDIFQDEGHRVGAFALWAAFVNVVDHGDLRFLAKMAEKMKDMD
Ga0102773_1425463	Ga0102773_14254631	F093978	YLKTRYREEIFNTSYSDHNQRQVLWMAYNMVEKIKGHLESVMNEGKLAAKELDQLQDLTK
Ga0102773_1426090	Ga0102773_14260901	F002923	MKCVLFFALAAAVVQEVTPVQKVIQLLQGMAEKGKKEKHEEQVQFAAYKQFCDDTTVEKQRAIKEATAKMEQLVAAIQKAEADAATLAKEIAQLDEDISVYEGDKKAATEVREMENADYLTTHKDYSESVDALERAIATLKKQAYDRTQLLQVNQLQLIPEHA
Ga0102773_1428945	Ga0102773_14289451	F017397	MVLMSIASFNNPRIGANLIMFENITYFFSSQTAYFWLAIPCVMTMAPDPSALTYDAVTLTIGGLWVEVHMNYIYGHIAAWAPLENNQAPDKLGLLRAQQMFFVTAPLHTLAIFQGTQDSWKILFAAKDASRWASFDSINAITTAKLWVLTMMVMLSSSIVVGLVRIGTAKKPFDEIERWLGVVMSFVFLSLTAVPSAAMFFHKSVTKAKAKPSLMDRCTAGVFGKALVITPSLFYMFLYSAAIVVLLALRGRARNAGF*
Ga0102773_1429407	Ga0102773_14294071	F021310	KKQEEQQAITMTSNNIQMKDTTDGVVVKADGRTLLAKLVFAGSARLAECDLGIDELRAAFKKAHGEEASQGTLTYQLNENDEDALQLVDDADLALAKKHGAEPLKITSTEVDTRDVFDHAAAELAKHGLDAPPTELKKLLDVLQFRPRRLVKCGLAPPKALKNTLKGDEAEEPEDVYVVEMAEALAIEDEPKPVNSGLAALQKTANEAAAALDKEADATLDDAALAAKLQAEEYGNHDVVLEAVTGRGVKLDSNTLHALLRMLHCRPARFVRLGLVEDIKAARQAFKLGGKACANEWF
Ga0102773_1433995	Ga0102773_14339951	F024093	HIVAKEIAEDITKQINKQCDWQVDQFLPPNSEGTIIDETHSYMARTVARHVANAFDVNTNKYYDE*
Ga0102773_1443133	Ga0102773_14431331	F018182	DGVVVKADGRTLLAKLVFAGSARLAECDLGIDELRAAFKRAHGDEASKGTLTYQLNENDGDALQLVDDADVALAKKHGSEPLKITSTEVDTRDVFDHAAAELAKHGLDAPATELKKLLDVLQFAPRRLVKCGLAPPKALKNTLKGDEAEEPEDVYVVEMAEALAIEDEPKPVTAGLAALQKTANEAAAALDKEAD
Ga0102773_1444097	Ga0102773_14440971	F090441	KGEVWELATLSFLDSLALGAPITRRVIIGCQFPDAASYRKNDSDMFRSHSGT*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007615: Marine microbial communities from the Southern Atlantic ocean - KN S14 DCM2_A metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences