| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300007588 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123882 | Ga0099778 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D4R_HD (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 40765399 |
| Sequencing Scaffolds | 4 |
| Novel Protein Genes | 5 |
| Associated Families | 4 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 3 |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F001758 | Metagenome / Metatranscriptome | 640 | Y |
| F033443 | Metagenome / Metatranscriptome | 177 | Y |
| F051952 | Metatranscriptome | 143 | N |
| F070166 | Metatranscriptome | 123 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099778_1005556 | Not Available | 851 | Open in IMG/M |
| Ga0099778_1017260 | Not Available | 538 | Open in IMG/M |
| Ga0099778_1040922 | Not Available | 536 | Open in IMG/M |
| Ga0099778_1091867 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 833 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099778_1005556 | Ga0099778_10055561 | F070166 | PVPVPNVVLSGVVMNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTRWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRMKF* |
| Ga0099778_1011768 | Ga0099778_10117681 | F001758 | QVTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER* |
| Ga0099778_1017260 | Ga0099778_10172601 | F051952 | ETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN* |
| Ga0099778_1040922 | Ga0099778_10409221 | F051952 | FTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEIVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSD |
| Ga0099778_1091867 | Ga0099778_10918671 | F033443 | SKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYESALELVNEVRNELNYDLTFFY |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |