Sample 3300007342

3300007342: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S2 Surf_A metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007342 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119792 \| Ga0079227
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S2 Surf_A metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	154884649
Sequencing Scaffolds	68
Novel Protein Genes	79
Associated Families	60

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	35
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	1
All Organisms → cellular organisms → Eukaryota	5
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	1
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
All Organisms → cellular organisms → Eukaryota → Sar	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	1
All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001145	Metagenome / Metatranscriptome	765	Y
F001219	Metagenome / Metatranscriptome	744	Y
F001419	Metagenome / Metatranscriptome	698	Y
F001504	Metagenome / Metatranscriptome	681	Y
F001583	Metagenome / Metatranscriptome	668	Y
F003068	Metagenome / Metatranscriptome	509	Y
F005343	Metatranscriptome	403	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007173	Metagenome / Metatranscriptome	356	Y
F007527	Metagenome / Metatranscriptome	349	Y
F008121	Metatranscriptome	338	Y
F012228	Metagenome / Metatranscriptome	282	Y
F012353	Metagenome / Metatranscriptome	281	N
F013897	Metagenome / Metatranscriptome	267	Y
F014026	Metagenome / Metatranscriptome	266	Y
F019484	Metagenome / Metatranscriptome	229	Y
F019552	Metagenome / Metatranscriptome	229	Y
F021052	Metatranscriptome	220	Y
F021321	Metagenome / Metatranscriptome	219	Y
F022752	Metagenome / Metatranscriptome	213	Y
F022892	Metagenome / Metatranscriptome	212	Y
F023135	Metagenome / Metatranscriptome	211	Y
F023529	Metatranscriptome	209	Y
F028188	Metagenome / Metatranscriptome	192	N
F028201	Metagenome / Metatranscriptome	192	Y
F029472	Metagenome / Metatranscriptome	188	N
F029784	Metagenome / Metatranscriptome	187	N
F030135	Metagenome / Metatranscriptome	186	Y
F032308	Metagenome / Metatranscriptome	180	N
F034581	Metagenome / Metatranscriptome	174	Y
F034958	Metagenome / Metatranscriptome	173	Y
F036277	Metagenome / Metatranscriptome	170	Y
F040127	Metagenome / Metatranscriptome	162	Y
F041790	Metagenome / Metatranscriptome	159	N
F041824	Metagenome / Metatranscriptome	159	N
F045809	Metagenome / Metatranscriptome	152	N
F047729	Metagenome / Metatranscriptome	149	Y
F049026	Metagenome / Metatranscriptome	147	Y
F049683	Metagenome / Metatranscriptome	146	N
F052644	Metagenome / Metatranscriptome	142	Y
F052657	Metagenome / Metatranscriptome	142	N
F055779	Metagenome / Metatranscriptome	138	N
F057435	Metagenome / Metatranscriptome	136	N
F059069	Metagenome / Metatranscriptome	134	N
F059997	Metagenome / Metatranscriptome	133	N
F063769	Metagenome / Metatranscriptome	129	N
F065812	Metagenome / Metatranscriptome	127	Y
F066123	Metagenome / Metatranscriptome	127	N
F068484	Metagenome / Metatranscriptome	124	Y
F070901	Metagenome / Metatranscriptome	122	Y
F070902	Metatranscriptome	122	N
F077347	Metatranscriptome	117	N
F077350	Metagenome / Metatranscriptome	117	Y
F092118	Metagenome / Metatranscriptome	107	Y
F092181	Metagenome / Metatranscriptome	107	Y
F093970	Metagenome / Metatranscriptome	106	Y
F093978	Metagenome / Metatranscriptome	106	N
F099350	Metagenome / Metatranscriptome	103	N
F101201	Metagenome / Metatranscriptome	102	Y
F103879	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0079227_1001624	Not Available	756	Open in IMG/M
Ga0079227_1002369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	651	Open in IMG/M
Ga0079227_1003220	All Organisms → cellular organisms → Eukaryota	590	Open in IMG/M
Ga0079227_1005264	Not Available	1248	Open in IMG/M
Ga0079227_1009391	Not Available	793	Open in IMG/M
Ga0079227_1013764	Not Available	609	Open in IMG/M
Ga0079227_1026048	Not Available	816	Open in IMG/M
Ga0079227_1028043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	928	Open in IMG/M
Ga0079227_1035058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	745	Open in IMG/M
Ga0079227_1037947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	536	Open in IMG/M
Ga0079227_1038670	All Organisms → Viruses → Predicted Viral	2144	Open in IMG/M
Ga0079227_1041973	Not Available	782	Open in IMG/M
Ga0079227_1087659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	694	Open in IMG/M
Ga0079227_1091739	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos	1229	Open in IMG/M
Ga0079227_1136776	Not Available	542	Open in IMG/M
Ga0079227_1140874	Not Available	508	Open in IMG/M
Ga0079227_1157385	All Organisms → cellular organisms → Eukaryota	570	Open in IMG/M
Ga0079227_1159959	Not Available	785	Open in IMG/M
Ga0079227_1160673	All Organisms → cellular organisms → Eukaryota	505	Open in IMG/M
Ga0079227_1183528	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
Ga0079227_1183771	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	698	Open in IMG/M
Ga0079227_1187729	Not Available	561	Open in IMG/M
Ga0079227_1201785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
Ga0079227_1215121	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	739	Open in IMG/M
Ga0079227_1215517	Not Available	917	Open in IMG/M
Ga0079227_1225556	All Organisms → cellular organisms → Eukaryota → Sar	687	Open in IMG/M
Ga0079227_1227261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Haifavirus → Haifavirus tim68	717	Open in IMG/M
Ga0079227_1230335	All Organisms → cellular organisms → Eukaryota	567	Open in IMG/M
Ga0079227_1249252	Not Available	874	Open in IMG/M
Ga0079227_1253802	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	728	Open in IMG/M
Ga0079227_1256303	Not Available	704	Open in IMG/M
Ga0079227_1262623	Not Available	574	Open in IMG/M
Ga0079227_1263001	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	514	Open in IMG/M
Ga0079227_1276767	Not Available	728	Open in IMG/M
Ga0079227_1276948	All Organisms → cellular organisms → Eukaryota	925	Open in IMG/M
Ga0079227_1278670	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
Ga0079227_1298127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	884	Open in IMG/M
Ga0079227_1301137	Not Available	607	Open in IMG/M
Ga0079227_1303746	Not Available	609	Open in IMG/M
Ga0079227_1310672	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	527	Open in IMG/M
Ga0079227_1310674	Not Available	707	Open in IMG/M
Ga0079227_1311054	Not Available	713	Open in IMG/M
Ga0079227_1318497	Not Available	677	Open in IMG/M
Ga0079227_1318895	All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	1451	Open in IMG/M
Ga0079227_1320775	Not Available	653	Open in IMG/M
Ga0079227_1326917	Not Available	709	Open in IMG/M
Ga0079227_1334145	Not Available	925	Open in IMG/M
Ga0079227_1336954	Not Available	524	Open in IMG/M
Ga0079227_1337407	All Organisms → cellular organisms → Eukaryota → Sar	821	Open in IMG/M
Ga0079227_1343566	Not Available	1251	Open in IMG/M
Ga0079227_1344789	Not Available	521	Open in IMG/M
Ga0079227_1346010	Not Available	595	Open in IMG/M
Ga0079227_1349068	Not Available	552	Open in IMG/M
Ga0079227_1353467	Not Available	796	Open in IMG/M
Ga0079227_1354816	Not Available	668	Open in IMG/M
Ga0079227_1357715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	587	Open in IMG/M
Ga0079227_1360092	All Organisms → Viruses → Predicted Viral	1543	Open in IMG/M
Ga0079227_1362853	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	602	Open in IMG/M
Ga0079227_1369491	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	765	Open in IMG/M
Ga0079227_1369506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	543	Open in IMG/M
Ga0079227_1369696	Not Available	976	Open in IMG/M
Ga0079227_1369775	Not Available	717	Open in IMG/M
Ga0079227_1370018	Not Available	1502	Open in IMG/M
Ga0079227_1371213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	939	Open in IMG/M
Ga0079227_1373143	Not Available	831	Open in IMG/M
Ga0079227_1389854	All Organisms → Viruses → Predicted Viral	1336	Open in IMG/M
Ga0079227_1389886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
Ga0079227_1394087	Not Available	523	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079227_1001624	Ga0079227_10016243	F041824	LIDRSTTQAIGRGLEQAQELHHGKHVFQWQVIRILQEARR*
Ga0079227_1002369	Ga0079227_10023693	F032308	VIVIPSFFYSGDVSIKEGATLTVCVPIGAINNSDDLNLEINLVDV
Ga0079227_1003220	Ga0079227_10032201	F068484	DITKLSTNELMDNNDIAVNDRVSIRTSNEHTYETRTVDYVNLEGLGTTTDNFFTVSQPFTAAHEEKHIYLNFKGTTSSAACSGRGLCDGSTAECQCFKGYTGQACQIQNALAA*
Ga0079227_1005264	Ga0079227_10052641	F092181	SDSYHILRVPAAPDPIATAKREMQADVKSTLIGAINKPTIHVNRTRDITLGFIKLKNELRSNAKPSLEFLDFILIWLNLLYFR*
Ga0079227_1009391	Ga0079227_10093911	F029784	VRLMCSQIYAHPVEGYKCFANANKSQGTYYTCCDLDTREIRYVTYIYDGYFMGYYLVQSATKVTENFANSQQKIFLSSASNKWPYYKGNDDEYTIDRQYPMQYDIPSLDEVEYSYLDSLLTAGTSK*
Ga0079227_1009391	Ga0079227_10093912	F013897	MNLNKDQLLALMNTIDFATDNDASYEEYTIIKSGTSDLDPIREILYNEYIHQTQ*
Ga0079227_1013764	Ga0079227_10137641	F052657	LELRSALQAHGDQLDTELRLLRELPQVYLTEKCVFDRGNGRIAKKRVAICSLRCCGEQLDQKSKCNDFSGERACPTVVDAVRFLRAKVENCHGVIGRSRCISFDFFCD*
Ga0079227_1019802	Ga0079227_10198021	F034581	DMPRHPAEMNITCRPGFNTSSWGPNFYRTSTTDGEWSGSMPLCLGVPLAALYEKEVFVKDGTLEVVPVKELTPVFVSGRGGAMPILEARDECGDDQLWCDLVAPSAGHMLVWETTKSYTQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNVTCRPGFNTSSWGPNYYR
Ga0079227_1026048	Ga0079227_10260481	F013897	KDQLLALMNTIDFATDNDASYEEYTIIKSGTSDLEPIKEILYNEYIHQTQ*
Ga0079227_1028043	Ga0079227_10280434	F034958	DNLEFCIETIGLNDEQTGEILAATNEIGVNVEYFCNEFMETSSKEVHESDYLNIALFNAMYWEW*
Ga0079227_1035058	Ga0079227_10350581	F041824	QNRPIYHLIDRSKTQAIGRGLEQIQELHHGKHVF*
Ga0079227_1037947	Ga0079227_10379471	F036277	LCSNPFVDKSTQYELRSPNKNKIDLIYLGSASLKQY*
Ga0079227_1038670	Ga0079227_10386705	F021321	MNRDYMANMLFDINDVVETIQSHSINNDIIEEYDKSQFEEEPKTLMDIPKDWEGSSISIGDCLLDLQTHINELYNYFSKEAE*
Ga0079227_1041973	Ga0079227_10419731	F077350	VTDSALANQIQKTEADPNQADIQALLEELESKLRGALDVLKPSVNAMCDNLKAAASEIRKDKDATKLWGTLNDLQVFLSLVQQICTSVGSQGPKVVEFDNALGDSLGTLETVVVDADDPEEVASFIEQNLIRSFDKWADAEAELRSMANL*
Ga0079227_1087659	Ga0079227_10876592	F041824	LIDRSTTQAKGRGLEQVQELHHGKHVFQWKVIRIL*
Ga0079227_1091739	Ga0079227_10917392	F103879	NPLPFTKETVYYASADALVTWGVFDLLSEFAFFSQMNRKLQGTQNFVIDSQTCYDTYAHEFAEQLGDRLSPYGHHTHLERIDSGLEQHKPESRLMTHFRRVVQKDKTTVGIGKSWVSTTRSGLSRIVDSRGALKHKREKETRLSLRNWSYRQELALDRRTTYWRERKKMRLYSIEYNLKNVTDTDHNQNSRVTRLYFRDALIESRQKRQLRVSLEPSTYDTFATRKLVVRARKPVAEPSELLAGDIISVWFDWAKTA*
Ga0079227_1132464	Ga0079227_11324641	F066123	SKSSDYNIGMFDNDDVSDVSGPMYPVNNIGDTTNASKPGMRVSMHVPKSSLRTRDNLSHKGWIKRRGGYGIFGKWKRQFLSLWRNSILYFHRDDASSDKFYNGNKSKNNAKGEINLRDIVGVRMVTKKGLPGDGRGIELVSSSGKVTTICPEGGGNIFMDWYNKLRNIIGNLNRGRYQRTGDPEYRKDVSEINPRQFGKGTMNDIQSSLNDVDSYNVDVWDLDESKSSDY
Ga0079227_1136776	Ga0079227_11367761	F055779	CAEGGRGGITYCSTNSSFYCCYRANGFCVTKTDNNQCGIICNQCNGAWVACAYGGEINKPGLNSCVSAFGCYPSCICMFNHHIPTPAGQGSKEGRMIVYTNDDGNGFAQWSGQGHHQHRANLGSGRFPTGGIPWSSCWGFSGACGCYNNDGCVPVLPVGTGGRGPNPCPGVRDHAIRGGH
Ga0079227_1140874	Ga0079227_11408741	F008121	PMLCILFVATRMRALQMTQNRGAPQGWVQDGMYLASWSVLIQFMMCLLMPIFTGRKFTPDTLDGSQKTTDEDINAMPGGKAGAIAVTVVRYVALVALLGGVATVITGAITMTPDTANGRGSIPVITDGTLPVDLAAPPPGVNDIPGAKSTMKGVGKTVGGGVDTVNSAG
Ga0079227_1157385	Ga0079227_11573851	F070902	GNDDANVGPRAVIKTFVDLGRFIEAGEQQSAVIGFFAVDEENGIIGRNDTKSSYGVFREASTKNKDASFGIVKDKAIAAKCGIPRLPMVLTFHYDEDGKQYEIRKTQFFEDMTIYYSDDKTRRVGLLKKGETEEDFKFVSLAPKRPGKKAAAEPQV*
Ga0079227_1159959	Ga0079227_11599592	F101201	MGSLGGLDVAFGSQMQLVRTNVLVIETDGTTTKAMAEMVHSIAAQKYPAALRPDFTAFVASGALTEGYATVLTDQVEGNVLKDITAVPTAGSTYGSSSDSRGMSWEAILNVGMAQIGAGDTLTADDLFTDASPAGIESDEMQGFSHALQA
Ga0079227_1160673	Ga0079227_11606731	F021052	WDGGKLFIKELDGVPATEAGTGSLLQSKSKSRQPADVDFGKEDAEFADSQSGSGNKVIDMLNFIAGETAEEKKTAIDTEDSDQSTFDDEMKTAKEAEQGMMTAIDGFKLDLANTEKSLQEASAELATTTDEHDATVQYLADIEPGCTFIQQNYDGRKAAREAEKAALE
Ga0079227_1179164	Ga0079227_11791641	F093970	MKVFLSNLNSDLKFFNSNKIISGIMARKPTKNLTALNVKGPILSMPVSWAIKVVPQMKVHNKALNNDMDLLIFN*
Ga0079227_1183528	Ga0079227_11835281	F049683	MNLIKIEELSELSGSALWIKENFEAIFLWFSVLCIVASALFILKLYLNRQK*
Ga0079227_1183771	Ga0079227_11837711	F012228	MINVDSNNSSLWQHILKIFKIFLINFQKFFSNFNPNLLQIIQLTFIYFFAVVDLLYAILNNVFSLGYLPEMLLPFFPIIKSILQSPIFQIWGSPEKVFFLSYVVIEFMIVRAVFKFSKLVKYNILLIFAMLMVQGLAISYWDVLFHREIASPVAKWAYDEGTLIHTDKGLAIVFFFNTFVIFMLAYIYLYIRAIQGKFATIPGMEWLTDSVAFWL
Ga0079227_1187729	Ga0079227_11877291	F001219	MNFPITFLLNAGGLFDFDLTFLIEAVLFITLAFVVTNVFLSPISKQLNERSEFINYTLRKATILLTFGYEKLIGCVGLLTEEIGEMNRQIKLTKDYTNASFESEVSSVQQANSQLLSKLKGDLSIKSAFVFSNITADLISLTDKFFVKKFKEQS*
Ga0079227_1201785	Ga0079227_12017851	F059997	FTDEADNVLITINNFIDRAKELTSLRLDKGKTLSKSAQESLMQIQDRIQEVYNDLDNILGLGEEEAEQPKDSIDALWLNTQEVLARSQGVVNEGDKVE*
Ga0079227_1215121	Ga0079227_12151211	F063769	YFRGCQPNCNCRNVPVIKFPPGMISTCGGEVHYTLDSDNGRSQWSGMGGWMNASHGFNLATRSPTQGGPYTACWTGNRSCGCYEHNGCIPFMPAGIGGQGPRPCDGVRDHAHRGGHGMIRIKFVSSTNDYDLDSAP*
Ga0079227_1215517	Ga0079227_12155171	F005911	NKPKYKKKGGRKTMSLKTRLLTMLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSGTEADIESPVSELFHNGNFISLKEMVKKAVIIVSDDPTATARSGVDTAYDADNSGVLIKFADADGTVIADGTGGDTIVADVHLFVNLAGTADAVTNTPYTAGEPFYYILMDDATAGFNDATTRTIDLTQFPTGILATNDGGPQAEVSVILPQD*
Ga0079227_1225556	Ga0079227_12255561	F092118	MEWHLSSFFLNNEEAFIQLNPNILESNVQNLVILIGILIYANNVSFSVSLENRQKEIIQTIENAQKDVLNASNYYYLAEKGFTQSLFWLQSWKVLYEKDKVDLVTNKY
Ga0079227_1227261	Ga0079227_12272612	F047729	MSELSALKDAQYHLSKLEGLIKNNKWYSHLYSHLAAVEGELQRQVAILEKDKSEDIPDTEKLYDVLEVSTNGMNPPDASYTSLTRVVAAQKYESLLSEGISPDDIKIKRVK*
Ga0079227_1230335	Ga0079227_12303351	F005343	DEKMGPNMNFSEVSTTMKCIISLTIQYMVVYTALGICRSYLDFTKTAYADSQVQKALKSASETMFYAPMVCLMFVGFRMRVLQLTKGTGNPQDWVRMSMQAVTYSILANTLMVMLIPIVTAKEVKTDDEGMMDNEGANPFENSSLAIVFNVIRYVVFLGLYVGFGAVCVGVFLFKPPAGVWDGPIPPVS
Ga0079227_1249252	Ga0079227_12492522	F007527	VFNNGISIGLKTSIPFGGQIEPISITGAKAAAKKAQKKAKKNITSETMNKIIP*
Ga0079227_1253802	Ga0079227_12538021	F001583	VDTLMVLSYMHIMKKIYLKNYVTSESDGMLGAYAFLFHLIIALGISLSASHLSDLTLTIVANIFSLFNNIYKTYYIIFTNKHLNTDQLTRLMILHYFVPYYLYLVKLHILFCHESDTDSGETTYEDKSGSYISFYDAFLKEIQDAFYTLYVFVYFFLHHFNGATVNYFFFERNISELDEVRFYGVAPHYFRPLMGILVISPTHYEGLMMGLFFGLLSFMPVIYNCYNVFHKY
Ga0079227_1256303	Ga0079227_12563031	F040127	MKMKKILIAFTMLVFGTVSAHAIDRSIFSVTAGIAANQGVFGASATETNLTETNTAGHVKKESGVFTDSYGSRFIELGIGQWISLGYEHTPDSVSTPENKTRENRTQEAKVSVDFNDLNTTYLRVGLPFAPGVYLKAGTVSTDLDIKETMGSGSTYQNVSTDGSVLGVGYHKFFGDSKFGLRLEGSYLELDNVSTNNGVSATGGSIANGGRNTIDAKNLEGLQAKVALTITFGR
Ga0079227_1262623	Ga0079227_12626231	F001504	MTQDTEHFYAVQSFLEDDELHKIWNIIEIAMEREGYDVSNAELSMKLYDPELTQTIGFYNK*
Ga0079227_1262623	Ga0079227_12626232	F007173	MQTTTTKAIISRDKLMEYIHEERDLLMGLQDDLSDMLSATGKFSITLDEIVQKFMPFIPLCLIENEDEIKQAYPDRVTDDEYIFIYDRDMTPNEITLNVEWRD*
Ga0079227_1263001	Ga0079227_12630011	F099350	GLAAPAPYDDGSGSLLSIDFAPGSPARDGIEAYDSGDHSPSMWAADHSARGESTVRERFLRLWNFFPAAARVRMDVTRASPRRWSDADYHDLAKLFLCDLDERAVEVVNTEAHDGWYKNDVLVLDDGWASVGPEGNMQYPLGPERHNAGPQTKREQVHVGAADDDVPEPAV
Ga0079227_1276767	Ga0079227_12767671	F005911	MKLKILNYINSKRGNALLLATAGTIAATFGVYFFVSLTTLSEDSKQRVAHLYNAYQMGQAIKAKIDGADINQARLGGGTETEIESPIDDLFHNGNFVTLKEMVKKAIVISADDPTATARSGSDVGYDLDNSGALIKYADVDGNVIEANSGSTALVNDVQVFVNLAGTADATSNTPYDAGEPFYYILMETDNSALADSFITIDLTQFPTGILATNDGGPQAEVSVILPQDAE
Ga0079227_1276948	Ga0079227_12769481	F070901	GLRVLTAVFTICDDRSLNGVALDSLGFDHQNDIDIGLTYVETGPGCWLTLYDGPNFNGKTAVISPETSMHLKHVGARNWNDLTRSITTRSSTGDGVALYLSHRVALGSVNDHCVAMYNANPEIFPKADGLYLCGDKNAAKTWNFDLADIIEQGFNIDGSHFGIKYLMSGRKVKLSIFDGPTRNTVSHGPLEMSGHETLDLETVKYGDDHWDSKAKSFTLVEV*
Ga0079227_1278670	Ga0079227_12786702	F093978	KAQLLLDEPLMKEAFNYLKTRYREEIFNTSYNDHDQRQVLWMAYNMVEKIKGHLESVMNEGKLASKELDQLQNLTK*
Ga0079227_1297594	Ga0079227_12975941	F077347	VMFQVIFSVAIPIIMSGTVKKGSTEGDMVYEVSNKPIGMCLTACRYIIMLSIYIGFTAVVVSVFTLEHPDGAQYTPPISPTVQCVMNLTFQFFFIYLMVWACISLREWTNMEWPLLTNTMESCMGTVAFCPMLAILFVGTRMRALQMTNNKGAPQGWAQDGMYLATWSIFVQFFMVIIAGVATGEKVKTDADGNATWHPTNIYLWYGVQVVRWFAVLALWGGAITVIISVFTITPETANGRGAIPLVTDGTVPVVGDQLAGPPPGAQNLPGMEPGGAAGDVVAPAGSAGEVMKTAGDTATDPAGAVSF*
Ga0079227_1298127	Ga0079227_12981273	F023135	KFAAIKPIIIALSAAKIISINIIWIIIINSSINVID*
Ga0079227_1301137	Ga0079227_13011371	F003068	MRKILTVISVLSLISFNANALERGDISATIGVAANSAVYGASAKETNRDDSSNIRRTASESGVFTESHTSGFIELNVGEFVSLGYEHTPDSITTPQADRTTNTNAKTTVSVDFNDLNIAYLKLNTPFGVYLKAGLVETDLDIKESMASGSTYSNVSTEGTIMGIGYNKALGERLAVRVEGSYMELDDVTTSNGV
Ga0079227_1303746	Ga0079227_13037461	F022892	MKPLANSIGVVNTMLPPNIVAIQLNILIPVGTAMIIVAA
Ga0079227_1310672	Ga0079227_13106721	F001145	MDLNTLSFFLNEEPLVQLNSNILESNVQNIVILLGILIYANNVSFSVTLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKMLYEKDKADLVTNKYKIIKSGLEETFDTTENLIKNFESKAFISVQRYMIFITASRILRKFLLLSEAEQSKIVEITISKLGG
Ga0079227_1310674	Ga0079227_13106741	F023529	RDEPDRVYFVDTAHGSTQPAYSPVKQAVLTHPSAITAGDTIYIGEQRCDVISSDSDVTVGLATEDSTYENYHSASVVCAQALSENAHSTADAIVTHDPIEVSFEGSTQSCTSTDRPALRFIYDDADIATGANDCADQSACADILAYNGQNRLVRWASGLSIASTSAHDLMDKNDLSVNDRVSIRTLNDHTYETRTVDYINLDGVAGSDNYFTVSQPFVGELTEKRIFLNFKGTTT
Ga0079227_1311054	Ga0079227_13110542	F052644	MDKVATFKDFIKVREYITLKYEYYARLGRFKDLSPEEKIEQDACWKLIRELKGFMDNVEENFEDPDQYHDFLIDDKVIPFDILTTKDCE*
Ga0079227_1314606	Ga0079227_13146061	F034581	QSIPLDMPRHPSEMNITCRPGFNTSSWGPNFYRTSTTDGEWSGSMPLCLGMPMTLVYETSVMVRDGSLHVTSTVELTPEFVTGRGAAMPILEDRDECGDDQLWCDLIAPSAGHMLVWETTKSYAQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDLPRHPSEMNITCRPGFNTSSWGPNFYRTSTTDGEWSG
Ga0079227_1318497	Ga0079227_13184971	F030135	REELATLSSFTDILHSTFVGCQFPDAILPGREAIDLVAGPLN*
Ga0079227_1318895	Ga0079227_13188951	F028188	KMNLYSVLLNDSFALYDAVCATPLEQFQILPLSAQVYPSSAGISSLEMSNLFPQVGGSSEFVYFTSGAGLGASAASLTS*
Ga0079227_1320775	Ga0079227_13207751	F019552	AAFALLAAMVSDVSAQAYVSPDKRYTTVGGLPECHGNNGPLGINCVAPPCSGTNGPKDGPTGTPCLQDEPADIPHYNTDPVAGRPYATTGDRTRTEDGLGHYPSPPNHADYNNGNAVSPAPYEGGNMTPGSGKQPITAAYFPDNYPAVLVQFPEPQPIGTLMAQLSARSMENY*
Ga0079227_1324310	Ga0079227_13243101	F034581	TCRPGFNTSSWGPNYYRTSTTDGEWSGSMPVCLGMLMPALYETAVFVKDGSLEVTKVAELVPEFVTGRGAAMSILEDRDECGDDQLWCDLVAPSTGHMLRWETTKSYTQEVELHWTGSTTEYIVDIYNTNSNPSQSIPLDMPRFPAEMNITCRPGFNTSSWGPNYYRTSTTDGEWSGSMPVC
Ga0079227_1326917	Ga0079227_13269171	F005911	LTMSLKIKLLTLLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGGSTETELEAPIDDLFHNAQFVTLKDMVKKAVIIVSDDPTATTRVGTDTGYDLDNSGVLIKFADVDGTVIDDGTGGDTLVADVHLFVNLAGTADATTNDPYTAGEPFYYILMDDVTAGFNDASKRTIDLTQFPTGILATNDGGPQAEVSVILPQDSE
Ga0079227_1334145	Ga0079227_13341451	F057435	QILLFTEATGLTKRAEVVHGTLFVKFNNPQDKWFFRRALRNFCRIFINRDTGINANDVGDEYAYDIVPEKDEKNWNRTEPLASQVDTQLSMMEDK*
Ga0079227_1336954	Ga0079227_13369541	F012353	MTLYTSGDWKVDPNKDVTFPLVDWIVKLFPVIKDKEIEINQVDLDGEFAMGFCQDNDGEFLIHVHNGLDIREYVKTLIHEFTHVRQTVDGITDANAREDEAYYLEEQLSKAFWDSNISGT
Ga0079227_1337407	Ga0079227_13374072	F001219	MIFTTTLFINKLFDFDLTFVIELTLFIILALIVTFKFINPISKEIDDRAEFINYNLRKSTILLTFGYEKLSDCISLLTEEINELNRQTKLTRNYSNSNFEGEISSIQKENLKILSKLKGDLSIKSAFL
Ga0079227_1340091	Ga0079227_13400911	F034581	YTQEVELHWTGSTSEYIVEVYNTNSNPSQSISLDMPRFPAEMNVTCRPGYNTSSWGPNYYRTSTTDGEWSGSMPSCVGMPMAALYETAVFVKDGSLEVSSVGEMSSEFVSGRGAAIPILEDRDECGDDQLWCDLVAPSAGHMLAWETTKSYTQEVELHWTGSTSEYIVE
Ga0079227_1343566	Ga0079227_13435662	F007527	VFNKGTSIGSKTSIPFGGQMEPISITGARAAAKKAQKKAKKNITSETIKRIIP*
Ga0079227_1344789	Ga0079227_13447893	F014026	MNQIKETYINALVDSMSMEDLQQYVANDMADWLFNCSESEALNELFIKVKYTLDEQFYNK
Ga0079227_1346010	Ga0079227_13460102	F045809	VSVFSEGIVAFSLPASTDTRTSNVTNNTLGIKADDEISLNSGTVQKLNNERIILESGVANDQVYLKLDGTDSSSRDNNGFVVHEGGVGMPADLALSIDSNATMTVS*
Ga0079227_1346881	Ga0079227_13468811	F034581	YNTNSNPSQSIPLDMPRFPAEMNITCRPGYNTSSWGPNYYRTSTTDGEWSGSMPVCLGMSMPALFESAVFIEDSTLEVTKVDELSPEFVTGRNAAMPILEDRDECGDDQLWCDLVAPSAGHMLVWGTVKSYTQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDMPRFPAEMNITCRPGYNTS
Ga0079227_1349068	Ga0079227_13490681	F003068	AYAVDVSQFSVTAGIAHNSAVYGATAKETNRNESNVIKTVDKESGAFAESHQSFFMELNAGEFISLGYEHTPDSITTPENQRVTNTNATTKVKVDFNDLNVAYVKLNIPGGLYVKAGVVETDLDIKESMASGSTYANVSTEGTLMGVGYSRALGDSPFSLRVEGSYMELDDVTTSNGVSATGGS
Ga0079227_1353467	Ga0079227_13534672	F049026	EKSASADIDDVAEGDESNVDLSDAMAAYTNAISKTKDIKISK*
Ga0079227_1354816	Ga0079227_13548161	F029472	YNHPTIMLSRKSIDKLTQKIEDEVANYVTEDPRFTELLNELVPEAIDITLGHIDDRSAINLVTHIASKLRCSPNHSQIHYPRCPL*
Ga0079227_1357715	Ga0079227_13577151	F041824	IDRSKTQAIGRGLEQAKELHYGKNVFQWKVIRIL*
Ga0079227_1360092	Ga0079227_13600921	F022752	GSPWGAVCNSTTNYRFGILGDASFAYNMNDFGTDMGHQNLSSQTYDDWQKYWKSINQCDQYPYAQYYTSSRDGFYTMNSFHSYTDQFEYDNGWTKINHVLPEGVRPRRLFCNKRNSLREMNMGNNSCAAFDHYDYTSHKLDNSDEYAIGTGYNEKNKMLVMVHSSNTSSSTSKTIHIFESSKCLNHVTKIKEYFDNLTSTEYFTDTWTTDNNRDMTVAVGNNKWVGFGHKNGNSMRYAAFNCANGNSLGTTDTARIYVGWQDFQGSTTTSYGANQGPQYYTKFNTTWDGTWGMIYSPYYYYACGINGFCMSLENPRKFISVNQTKSDRANPYVAWGRTGFHGGWSDNTDDQQWRTYSWSFDPTDSDHTQDTTVYYGSTDNNDVIRDDNNLRGTTITQKTGNYSTENSRTGLHGGSHTTCYPAIMQIDWWGQYGNNSSSYGGVGHSGTDA*
Ga0079227_1360169	Ga0079227_13601691	F034581	LLSYSVVKAYSKEVELHWTGSTTELIVDVYNTNTNPSQAIPFDMPRFPAEMNVTCRPGFNTSSWGPNYYRTATTDGEWSGSMPVCLGVPMAPLYESAVFVQDGSLSVSEVAEVTPEFVANRGAAMPILEDRDECGDDQLWCDLIAPSAGHLLSYSVVKAYSKEVELHWTGST
Ga0079227_1362853	Ga0079227_13628531	F065812	MGDILLPRLNIDGKPIANKYCEGKVKRTLKRGLKDLKPLERKV*
Ga0079227_1369491	Ga0079227_13694911	F041790	MPTAAPTAAGALSLCARDDGSKMAVVSGSLTFGATRDDDDEEGCLMRSGDDRFSSSYATSSQKTDATISARVMSEGSIRRDYGLLLRVTDDWDDSFRYQPRAGYRCTVNTGRDGKADSTLSVEVLREDGSRSTVASYAPAFALEPGTWYTVSASAVGNRITCQIMRGDWVLGSAEAVDDTYGDGYFATWNYKDDSGPHWWGDLRIVDAPPPAARRLRGSR*
Ga0079227_1369506	Ga0079227_13695061	F041824	QNRPIYHLIDRSTTQAIGRGLEQAKELHHGKHVFQWKVIRIL*
Ga0079227_1369696	Ga0079227_13696961	F019484	YFLTILGGSLKKIAKKITTRVPISKKVYTNASII*
Ga0079227_1369775	Ga0079227_13697751	F040127	IKMKKIIIAMTMLVFGTVSSHAIDRSVFSITAGLAANQGVFGASAKETNLTDTNTTGHIKKESGVFTDSYSSQFIELGIGQFVSIGYEHTPDSVTTPTHTPREDGNTNLSSGSKVSVDFNDLNTTYLRVNLPFAAGVYVKAGTVSTDLDIKESLAGGRSYKNVSTDGSVIGVGYHKFINDSRIGVRLEGSYLELDNVSTDNGVSKTGATVANGGRNQVDASNLEGLQAKVAITITLGKD
Ga0079227_1370018	Ga0079227_13700182	F049026	FGKKESTSEIDDVAAESNAEQPQDLTNAMAAYSAAISKTKDIKLSN*
Ga0079227_1371213	Ga0079227_13712131	F059069	INQYVVYTSPVKIVSDFTEACKLADDYFNETGYIVAVEETNPVVYPEYEVA*
Ga0079227_1373143	Ga0079227_13731433	F028201	FNPLFKMTEYDQKQSKEIYNALLDSKVDLLEYFLGPDPKKTSYYKKHIKRYRVKSILNDY
Ga0079227_1389854	Ga0079227_13898542	F014026	MNQIKETYINTLVDSMSMEDLQQYVVNDMADFLYNCSESEVINEFLIKIEHTTNEQFYNKFVKQNKEILL*
Ga0079227_1389886	Ga0079227_13898861	F001419	EILNCYEGIDDIHASTSFEFGLMNDLYYQLFYNYDRD*
Ga0079227_1394087	Ga0079227_13940872	F036277	LCSNPFVDKSTQYELLRLNKNKIDLTYLGFRLLK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007342: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S2 Surf_A metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences