| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300007197 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123891 | Ga0099780 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_5L (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 68761870 |
| Sequencing Scaffolds | 10 |
| Novel Protein Genes | 12 |
| Associated Families | 12 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 4 |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 2 |
| All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C | 1 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1 |
| All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Klosterneuburg, Austria | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F001758 | Metagenome / Metatranscriptome | 640 | Y |
| F004408 | Metagenome / Metatranscriptome | 439 | Y |
| F014988 | Metagenome / Metatranscriptome | 258 | Y |
| F017318 | Metagenome / Metatranscriptome | 241 | Y |
| F025291 | Metagenome / Metatranscriptome | 202 | N |
| F045132 | Metagenome / Metatranscriptome | 153 | Y |
| F051952 | Metatranscriptome | 143 | N |
| F052619 | Metagenome / Metatranscriptome | 142 | Y |
| F056350 | Metagenome / Metatranscriptome | 137 | Y |
| F067727 | Metagenome / Metatranscriptome | 125 | Y |
| F070166 | Metatranscriptome | 123 | N |
| F105419 | Metagenome / Metatranscriptome | 100 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099780_1000138 | Not Available | 858 | Open in IMG/M |
| Ga0099780_1008123 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 2106 | Open in IMG/M |
| Ga0099780_1009174 | Not Available | 794 | Open in IMG/M |
| Ga0099780_1027857 | Not Available | 726 | Open in IMG/M |
| Ga0099780_1072160 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 538 | Open in IMG/M |
| Ga0099780_1120246 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C | 580 | Open in IMG/M |
| Ga0099780_1202413 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 885 | Open in IMG/M |
| Ga0099780_1217889 | All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 2259 | Open in IMG/M |
| Ga0099780_1218502 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea | 894 | Open in IMG/M |
| Ga0099780_1220280 | Not Available | 820 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099780_1000138 | Ga0099780_10001381 | F070166 | ITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGSPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVTERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP* |
| Ga0099780_1008123 | Ga0099780_10081232 | F004408 | ENSDLNFLKFLNKSQVDSFYSLDNNEQETVKLYINEKSYYSTKDVLNLISEALSARNETLEDRVIRLMPENIKPIWNQLNESSRKSILSQARLYPEDVMQSESQLDHFWLTRNLKKNESVTKKLVSHESLIQEDKISDNELTAIMERFKNL* |
| Ga0099780_1009174 | Ga0099780_10091741 | F045132 | VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSHHSSSPSSLFAYTDSVRTLPEELVNPASAAKYISTRLQRGLVNQPDLAFPRSPGRILETAADQ |
| Ga0099780_1027857 | Ga0099780_10278571 | F051952 | FTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN* |
| Ga0099780_1065064 | Ga0099780_10650641 | F001758 | SQVTGERSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER* |
| Ga0099780_1072160 | Ga0099780_10721601 | F067727 | LSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYES |
| Ga0099780_1120246 | Ga0099780_11202461 | F017318 | SKCRGDPSGISFNQLWLSPRVGSHYLLTKSQNKRAVKRRASRNKSPLPNMGIPLQGAPLKFQRTVEDAFNIVCDGINPSVGTFNFSLNDLPNYTEFTALFDMYKIDKIEIEFYPEYTVLSDGGVTSPAIDVQLNTAVDPTGQSVTAVSDVLQYSTLVATGISKNHKRTFVSSYLMDGILPCACYISTASPSSN |
| Ga0099780_1197547 | Ga0099780_11975471 | F052619 | MNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNE |
| Ga0099780_1202413 | Ga0099780_12024131 | F105419 | MRKLFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGERGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFGGFVHPKARAGYGGDGTPERQ |
| Ga0099780_1217889 | Ga0099780_12178892 | F014988 | MSFNPASPIIGAAVPGFTNPTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL* |
| Ga0099780_1218502 | Ga0099780_12185021 | F056350 | KNLLSYFAVLTVSFHEIQSLWGFFALIIVFSQIVSGIMLSFSLIPDSMLIPMARDEEDCEDLVTDDFFWVHERGVDLVFIFTYLHLFRKFYLNLIEYEHEVT* |
| Ga0099780_1220280 | Ga0099780_12202801 | F025291 | HMVNLRKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |