NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007187

3300007187: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C6L_LD (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300007187 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0103597 | Gp0123880 | Ga0099788
Sample NameActive sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_C6L_LD (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size61924382
Sequencing Scaffolds9
Novel Protein Genes9
Associated Families6

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available7
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
TypeEngineered
TaxonomyEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationKlosterneuburg, Austria
CoordinatesLat. (o)48.3Long. (o)16.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F014988Metagenome / Metatranscriptome258Y
F025291Metagenome / Metatranscriptome202N
F037756Metagenome / Metatranscriptome167Y
F051952Metatranscriptome143N
F070166Metatranscriptome123N
F091427Metagenome / Metatranscriptome107Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0099788_1009690Not Available574Open in IMG/M
Ga0099788_1014552Not Available541Open in IMG/M
Ga0099788_1053899Not Available777Open in IMG/M
Ga0099788_1060739Not Available866Open in IMG/M
Ga0099788_1150402All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora557Open in IMG/M
Ga0099788_1202311Not Available629Open in IMG/M
Ga0099788_1204643Not Available614Open in IMG/M
Ga0099788_1205865Not Available621Open in IMG/M
Ga0099788_1209953All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum1632Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0099788_1009690Ga0099788_10096901F070166ALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATIKRMKAKALTLEGDFLIPKRNMPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQLVGSEFGNLERESTELILKLMKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGK
Ga0099788_1014552Ga0099788_10145521F051952LSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0099788_1053899Ga0099788_10538991F051952SWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGTEVFTFRAVFTSLEDVVSANPQDRLTRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN*
Ga0099788_1060739Ga0099788_10607391F051952MPKNPRQTIAPDHFTSTALSESSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFPPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGT
Ga0099788_1150402Ga0099788_11504021F091427MLVVGVYYAGISTTISITNLLVTRRTLTMPGMRNRRIIIPFITITVLLMLRALAVITPVLGSAMLMLILDRH*
Ga0099788_1202311Ga0099788_12023111F025291FRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTLLTTDEFQNMSVVYNEFKIHKAVFTSLPTSNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSSRIFAPKALNAQSCEWNLQGVGPNFNVWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099788_1204643Ga0099788_12046431F037756LFPVPTLGAHLAAAAGFPTPFSAANGVSGLVAGPSNLSRG*
Ga0099788_1205865Ga0099788_12058651F070166SKIAYGKDFSLIELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISNQEKLQGLRRSLEIKARIERIDPNWRNSQITEASKGRI
Ga0099788_1209953Ga0099788_12099533F014988PTYTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL*
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