Basic Information | |
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IMG/M Taxon OID | 3300006957 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0117909 | Gp0125682 | Ga0102533 |
Sample Name | Freshwater lake microbial communities from Singapore - a non-axenic P13C2 culture |
Sequencing Status | Permanent Draft |
Sequencing Center | The Singapore Centre on Environmental Life Sciences Engineering |
Published? | N |
Use Policy | Open |
Dataset Contents | |
---|---|
Total Genome Size | 28770076 |
Sequencing Scaffolds | 1 |
Novel Protein Genes | 1 |
Associated Families | 1 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Freshwater Lake Microbial Communities From Singapore - A Non-Axenic P13C2 Culture |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake → Freshwater Lake Microbial Communities From Singapore - A Non-Axenic P13C2 Culture |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | Unclassified |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
Location Information | ||||||||
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Location | Singapore | |||||||
Coordinates | Lat. (o) | 1.376759 | Long. (o) | 103.898487 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F082218 | Metagenome | 113 | N |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
Ga0102533_10753 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales | 9512 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
---|---|---|---|
Ga0102533_10753 | Ga0102533_1075310 | F082218 | MSGTLPLREAALAAIAERIITGLPDVALDRARRAPVDVEAETLPRLVLRGEEIEADDTEEPGRTHYRIGFVVSGFAAAASDLAAEQALSTLHARLVSLLAGWTPAAPGLGDVVEQGAEFRMYDTEESALPAGEFLARFSILAIGPNGGPWSA* |
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