Sample 3300006717

Basic Information
IMG/M Taxon OID	3300006717 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0053074 \| Gp0092399 \| Ga0031665
Sample Name	Metatranscriptome of deep ocean microbial communities from Atlantic Ocean - MP0548 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300006717 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0053074 | Gp0092399 | Ga0031665

Sample Name

Metatranscriptome of deep ocean microbial communities from Atlantic Ocean - MP0548 (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	109800272
Sequencing Scaffolds	31
Novel Protein Genes	34
Associated Families	33

Dataset Contents

Total Genome Size

109800272

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1
Not Available	12
All Organisms → cellular organisms → Eukaryota	9
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira yanagawae	1
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → DHVE2 group → Aciduliprofundum → unclassified Aciduliprofundum → Aciduliprofundum sp. MAR08-339	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Tunicata → Ascidiacea → Phlebobranchia → Cionidae → Ciona → Ciona intestinalis	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales → Debaryomycetaceae → Meyerozyma → Meyerozyma guilliermondii	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium

Not Available

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201

All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira yanagawae

All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → DHVE2 group → Aciduliprofundum → unclassified Aciduliprofundum → Aciduliprofundum sp. MAR08-339

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Tunicata → Ascidiacea → Phlebobranchia → Cionidae → Ciona → Ciona intestinalis

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales → Debaryomycetaceae → Meyerozyma → Meyerozyma guilliermondii

Ecosystem Assignment (GOLD)
Name	Deep Ocean Microbial Communities From The Global Malaspina Expedition
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition

Ecosystem Assignment (GOLD)

Name

Deep Ocean Microbial Communities From The Global Malaspina Expedition

Type

Environmental

Taxonomy

Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine biome → marine water body → sea water

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	South Atlantic Ocean
Coordinates	Lat. (^o)	-26.95	Long. (^o)	-21.4	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

South Atlantic Ocean

Coordinates

Lat. (^o)

-26.95

Long. (^o)

-21.4

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000183	Metagenome / Metatranscriptome	1709	Y
F001017	Metatranscriptome	804	N
F001271	Metatranscriptome	733	Y
F001583	Metagenome / Metatranscriptome	668	Y
F001707	Metatranscriptome	648	N
F002392	Metatranscriptome	564	Y
F002556	Metagenome / Metatranscriptome	548	Y
F003864	Metagenome / Metatranscriptome	464	Y
F006501	Metagenome / Metatranscriptome	371	N
F008743	Metatranscriptome	328	Y
F011659	Metatranscriptome	288	N
F014024	Metatranscriptome	266	N
F014836	Metagenome / Metatranscriptome	259	Y
F014853	Metatranscriptome	259	Y
F019837	Metagenome / Metatranscriptome	227	Y
F027881	Metagenome / Metatranscriptome	193	Y
F030135	Metagenome / Metatranscriptome	186	Y
F031929	Metagenome / Metatranscriptome	181	Y
F036277	Metagenome / Metatranscriptome	170	Y
F040662	Metatranscriptome	161	Y
F047103	Metagenome / Metatranscriptome	150	Y
F049010	Metatranscriptome	147	Y
F049565	Metatranscriptome	146	N
F057398	Metatranscriptome	136	N
F063613	Metatranscriptome	129	N
F067801	Metatranscriptome	125	Y
F067833	Metagenome / Metatranscriptome	125	Y
F070259	Metagenome / Metatranscriptome	123	Y
F073629	Metatranscriptome	120	Y
F076161	Metagenome / Metatranscriptome	118	N
F078792	Metatranscriptome	116	Y
F090441	Metatranscriptome	108	N
F091895	Metagenome / Metatranscriptome	107	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0031665_1003766	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	695	Open in IMG/M
Ga0031665_1004435	Not Available	1073	Open in IMG/M
Ga0031665_1005136	All Organisms → cellular organisms → Eukaryota	647	Open in IMG/M
Ga0031665_1009361	All Organisms → cellular organisms → Eukaryota	668	Open in IMG/M
Ga0031665_1025976	Not Available	526	Open in IMG/M
Ga0031665_1027417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	574	Open in IMG/M
Ga0031665_1209318	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira yanagawae	567	Open in IMG/M
Ga0031665_1262886	Not Available	642	Open in IMG/M
Ga0031665_1264936	All Organisms → cellular organisms → Eukaryota	599	Open in IMG/M
Ga0031665_1265651	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → DHVE2 group → Aciduliprofundum → unclassified Aciduliprofundum → Aciduliprofundum sp. MAR08-339	523	Open in IMG/M
Ga0031665_1269510	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Tunicata → Ascidiacea → Phlebobranchia → Cionidae → Ciona → Ciona intestinalis	581	Open in IMG/M
Ga0031665_1276531	All Organisms → cellular organisms → Eukaryota	820	Open in IMG/M
Ga0031665_1279036	Not Available	521	Open in IMG/M
Ga0031665_1286534	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	700	Open in IMG/M
Ga0031665_1288593	Not Available	547	Open in IMG/M
Ga0031665_1291889	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	684	Open in IMG/M
Ga0031665_1295576	Not Available	772	Open in IMG/M
Ga0031665_1298101	Not Available	503	Open in IMG/M
Ga0031665_1299433	Not Available	583	Open in IMG/M
Ga0031665_1300600	All Organisms → cellular organisms → Eukaryota	553	Open in IMG/M
Ga0031665_1304038	Not Available	711	Open in IMG/M
Ga0031665_1309187	Not Available	572	Open in IMG/M
Ga0031665_1311044	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	524	Open in IMG/M
Ga0031665_1311698	Not Available	559	Open in IMG/M
Ga0031665_1312488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha1_Bin1	966	Open in IMG/M
Ga0031665_1314163	All Organisms → cellular organisms → Eukaryota	844	Open in IMG/M
Ga0031665_1318927	Not Available	739	Open in IMG/M
Ga0031665_1323752	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Saccharomycotina → Saccharomycetes → Saccharomycetales → Debaryomycetaceae → Meyerozyma → Meyerozyma guilliermondii	634	Open in IMG/M
Ga0031665_1327226	All Organisms → cellular organisms → Eukaryota	601	Open in IMG/M
Ga0031665_1330014	All Organisms → cellular organisms → Eukaryota	689	Open in IMG/M
Ga0031665_1334353	All Organisms → cellular organisms → Eukaryota	1670	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0031665_1003766	Ga0031665_10037663	F067833	GIVAMANVFQHHMYVMAQVNSVTQVGVLTVPMVQMKA*
Ga0031665_1004435	Ga0031665_10044351	F027881	IMSLTVARSERVRSVLTHASCTEISINFSSVRVSNIKIVVNKIV*
Ga0031665_1005136	Ga0031665_10051361	F001707	DASKNPNSKAKRELYGFLTMAFGDVDVDKDGKINAQEFDFLCEKVASMPRRFGLAPSWQAEYGGSVEKRTAARKAMFDAIDAKAGTSRGWIGCAQFVDWAFTHVAGKAGTIGATEVDLYHVQNYSEGDLLKTLEVACSDKNSREYAGLYEFLLTLFVEVDEGCKGEISFNEFNGLIERAALVPRTFGLAPPDGTAEERKAIFASMDDTKTGLITF
Ga0031665_1009361	Ga0031665_10093611	F001707	AFAQWCTDASKNPNSKAKRELYGFLTMAFGDVDVDKDGKINAQEFDFLCEKVASMPRRFGLAPSWQAEYGGSVDKRTAARKAMFDAIDAKAGTSRGWIGCAQFVDWAFTHVAGKAGTIGASEVDLYHVQNYTEGDLLKTLEVACSDKNSREYAGLYEFLLTLFVEVDEGCKGEISFNEFNGLIERAALVPRTFGLAPPDGTHEERKAIFASMDDTKTGLITF
Ga0031665_1025976	Ga0031665_10259761	F090441	ATLSFPDSLALGALITRRVIVGCQFPDAVSYRKNDFDTFRSHSGT*
Ga0031665_1027417	Ga0031665_10274172	F036277	LCSNPFVDKTTQYELLSPNKNKIDLSYLGSASLDN*
Ga0031665_1209318	Ga0031665_12093181	F014853	FWFHGSGGNAAHCGSNSKLVEQAEQLGFAYVCGEAVDGQWDIPATITDQTGTPCESSDSSEVGYMQAVLKHLEQSGKYDTKRIFTSGCSMGSAFSGYMGNCLKQWDPTQISAFATHSTGLKYKGDGNRLPENWGECANCQWWPFAPIKYNDSPGLKACIFDNTGDGDFYKTSKYLAQKWPSLGNPSES
Ga0031665_1262886	Ga0031665_12628861	F006501	LAYGNTMIGYWCNKDDQMKACAAATDALAPVVKECNKKQTQFESEFCAMAIVYHAQCQDLNDVCYTETRAAYDSSVASTSKLLGKWKIEYQALKKINCFLDVWLSDGDANTVSSEKLAACKATEADASIMNIDFGTPVKEFVCADAGFGTLPDYPGTPEFVTKEYGAWPDLVQDVIHCHIEDPVAVSTTAGANTPAYR*
Ga0031665_1264936	Ga0031665_12649361	F001017	IHLKYFTMKAVLVLFVVASAFAAPDTRFLCSECVDEMHNLGFLVRAGAHDIRDYLAANYCPTVEANQQDFCIEKLARYYIGMLDAIVHHYFMDGAVHVCQTMGVCDAFRSGRYTCEECVQGLEWVENYIEDPIMIAEYVVYLEQNFCQDDWEGCKEHAIQDFPAMHNMAMEKFFIPTEICNQQEVCGAPPPTKPPQ*
Ga0031665_1265651	Ga0031665_12656511	F003864	LFGALEASKATLAFAPMLSILFVTTRMYALLITDKKGAPQGWVQDGMYMSTWAIAISFMSCLFTGLLMDEVKTDEDGNVINKFSSPAAGFGMQFVRYLSMFLMYGGILTVIYGLFVMTPETANGRGSLPGVGQTPLGDSPPGPGALAKGSF*
Ga0031665_1266006	Ga0031665_12660061	F000183	LMARSKPDELAANGCAPAPTPQQAPSFLQFKAPEDDLAQEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATINEFDTIARLETQAIDAYNDAHHYRAENPLTHLHEDEAPVETDKLKSFH*
Ga0031665_1269510	Ga0031665_12695101	F040662	ELTMEMNKNAYLFEELKITLNDQIQLLTNSKARFAMMLSEARSNLAADREEVNAKEQQKLDLEKAYLDFMKKCCERVKWIMFQDMCALIVVRNAVLESSTTCPGQEIVDCDVDNWVGQKCTVDCDDSCPAVPDPTEVYTCGGWQTINRKIVVDPPDECGLRCPALSRTKKCNQRKCPIDCVMSEWSGWSKCTA
Ga0031665_1274498	Ga0031665_12744981	F078792	NKADLEATIQKETSNSDALGAKIDDLSSDIAEDEAELKKATGIRKKENTAFVAQEKELKSVIDMLQRAIAILEKEMGGGASMMQLKSASNLAQALDIMVKASAISTADAGKLTALVQTQSDDADTGAPAAEVYESKSGGIVDTLNGLLEKAEGQLDAATKAETQAKNEYDMKKQALTDEIKYANK
Ga0031665_1276531	Ga0031665_12765311	F047103	AKNGNIWPEMTKNADLGPNLAVFGPKSLIFMGVSKSFGTNITENHLDNLSALFFGQALDQMGQKCRYLAQNASFGPNLAVFGPQIQFFGGRE*
Ga0031665_1279036	Ga0031665_12790361	F067801	CFANMRTLVATALAAYAANADETSLMQDLVKRSATNKLSADAQTSRQDSTAKLLDTAVNMIKNGVTPDVITFVDATNQDINEEVLVAIQSEHDIDQAYINSLCQDFLNAVQALEDQAAAIAVHDNNRLAASEAHHRCRADEAYTCAKSRRCEEQLRQKWITVKHEETVMREIH
Ga0031665_1286534	Ga0031665_12865341	F057398	QSTKLKEEVATLQKELAEIASTQAEMDSLRAEEKATYEETKPELEKAVAGIQSALKVLKDYYAKEASHGASEGAGGGIISLLEVAEADFSKNLSEVLAEEQTAAAAYEAQTKENGMTKLTKESDVKYKTKEAASLDKAVSELSTDLEGVQDELDAVNAAWKTITAQCVAKPETYEERKARREAEINGLKDALEVLESETAFVQVSAKHLRGVRKHA*
Ga0031665_1288593	Ga0031665_12885932	F031929	FGINSTVGLSVNGDDAQLIDVSTDGNASGISYESSFEYDLAAEDESGESSPSYWLRGVVTPDFAKGAYGIIGYNSDEEVTYGIGYNASDNFKVATELSGDGDTVIRFSYSF*
Ga0031665_1291889	Ga0031665_12918891	F001271	ENVDELIERQEKSLVQLDSKRNVVNDLIEKGKKILEHPDKPKFLEGNVKRIQEGWDDTNKKAQDRLKLLQDTKEAWVGYAENNETIASEFEVAEEEIKKVKKRYNLEDALSDLKKRQELYNKSNNTISGLFKAINDNFTCMSITLPEDKKKVLDKEIKAVDAKLEVVTRFKDTVAVVEDFCTALVNFDNSLKAVDGWKDTATAELKDIKEASGAMLPEDRVARTMDLQ
Ga0031665_1295576	Ga0031665_12955761	F049010	EQEPGSVSHTTTENPAINQGLTIDTEPTAADEPMPKGFVPAPFCCEAYGVACGSPGGGIMCSPEPPDCGLLHDKLSLMWGDYKDKVDELTMIMNKNAFEFEELKYTLNDQIKILTNSKARFSMLLSEARSNLAADREEVRAKTEQKEEVEKEYRAFMKLCCERIKWIMFQDMCALIVVRNAVLETSADCP*
Ga0031665_1298101	Ga0031665_12981011	F019837	DVQSLVKTASTHGSGKFDETSMAKARIALNDLVEKAWVELDDKIIECKEYQEMNRATFDQVVTDISRLVEQITDLERVDTESLEGIAKMEMEIKAVEAELSKETKIYNYNFAKNSDELTKRQNDLDVFQFILTFTRCEDATSLLQSNVNETRICAIKGGGHSMCFRD
Ga0031665_1299433	Ga0031665_12994331	F014836	YNGCFCFAEWNDANDVGNWTVNENWLQLMEPSWVHFVSISGDNTVTVDEERRINELYVGPNRWDTTRLVIDEDLTIVYDDVPVISRIQAYRLPTGQVRLIIQGKGFGFVSEDIAVVAEDFYEVDNDSNIDDMEPFTYVCNNPTLTYRDAKIECNLTAANIMPSALKVQVRANGYTTDFVLLSEYVQ*
Ga0031665_1300600	Ga0031665_13006001	F002556	EKEYGNVERRTASRKAMFDMIDLRQGPARNWIGLEQFVRWSFDHVVTKAASIDASAVVDLYHVEQYGETQVLAFLDKAVNDVTSAEHASLYEFLLAVFTEVDSRSAGVLNFKEFDALLSRAAQVPRTFGLAPPDASAEFRKAAFESMEDKAMGGVTFRRLVEWTVEHTKGKISDQKAGKGYKK*
Ga0031665_1304038	Ga0031665_13040381	F073629	PTQEARKDATAKLMETATKMIKAGATPDVIQFINTIITEVNEEVLGAILDEHVRDQELINVLLVRFDDAVSAMEACAASVREQHTDREASSTAHKQCRSLESIACARSRRCEGELEEKWRMVQHEEGEMREIHSAIHGEWCVGPEPPQPDLDDPFVWTESVHSEGDETSLSEIPYPHVAFTDAVIEFRHFSVTQFERYLIQKPRVERAWEEYNAKLIECAAYEETWTLKVDECDGLQ
Ga0031665_1309187	Ga0031665_13091871	F008743	WVGYAENNETIASEFEVAEEEIKKVKKMYNLEAALADMKKRQDLYNKSNNTISGLFKSINDNFTCMSITLPEDKKKVVAKEISAVDAKLEVVGRFKDTVKVIEDFCAALVNFDNSLKAVDGWKDTATAELKDIKEASGAMLPEDRVARTMDLQEDIAAKLEILKKCAETEAALLPQGGNVDKDAQAFKNE
Ga0031665_1311044	Ga0031665_13110441	F001583	SLFNNAYKTYYILFTNKHLNTDQLTRFMIFHYFSPFYYIYLVKLHVLFCHESDTDSGETTYEDKSGTYVSFYDAFLKEIQDAYVLYIYVYFFLNNFNGSTVNYFFFERNIAELDEIRFYGVAPHYFRPYMGILVISPTHYEGLM*MGLFLGSLAFLPLIYNVYNTFNK
Ga0031665_1311698	Ga0031665_13116981	F091895	APDPAVYENQSGGVLDTLNKLLEEAQGQLDAARNKETSSIQAFEMLKQGLEDAIKFANKEMDEAKQSKSASAEAKATAEGDLDVTSKDLAEDIKTLAELHHNCMTKANDYEAETKSRGEELKALATAKKIIKETTGGAADQSYGLDQESFLQMPEGETRAVRFIRQLAKNQKSPALAQLASRMSS
Ga0031665_1312488	Ga0031665_13124881	F076161	PRNRRAEAHRFMKSINFSSRRPKTGFRAFAEKPVAKSLLLPQFGGQKMPPQGASIPNRLAAWTVPQIAADPKERSNLLSSPTNPDALTGKPVRRLD*
Ga0031665_1314163	Ga0031665_13141631	F002392	VSRSAVRTPAVRAFAAVPSPWGSDAWRYDKNAFQAWASEAVTKKGSAAQRELYGMLAMRFGDTDVDKDGKINAAEFDSLCEDVASLPRRFGLAPSWEKEYGNVERRTASRKAMFDMIDLRQGPARNWIGLEQFVRWAQDHIITKVGTIDASAEVDLYHVEQYGEAQVLAFLDKATSDINSREHASLYEFLLAVFTEVDGRSSGVLTFKEFDALLTRAAQVPRTFGLAPPDASAEFRKAAFEKMEDKAMGGVTFRTLVAWTTEHAKGKIADQKAGKGYKK*
Ga0031665_1318927	Ga0031665_13189271	F030135	NREELATLSSFTDIWHSTFAGCQFPDAILPDKEAFDLVAGPLN*
Ga0031665_1323752	Ga0031665_13237521	F063613	MYFILLTMNLITSLLKKRGGERGSGLLVGLALKGSGGLLALVVGGSTNLSLLLQSLDGILILPSDLVGQTTEASEVAARSESQHTEGLRANHTVDLVVRRGDTLEDLEVSQSGGTTGGLVGDHSTDGSPENLRGSTEVERTTSGVDVASLSKEVLVLELVSEVRTRDVDVLATNNNDLLSGQELLGNSGGKTAQKVTLSVNHDSLLKHAWT
Ga0031665_1327226	Ga0031665_13272261	F014024	FRSFILLEKMLATRSSVRCARAAASPWGAEAWRHDKTAFAQWCTDASKNPNSKAKRELYGFLTMAFGDVDVDKDGKINAQEFDFLCEKVASMPRRFGLAPSWQAEYGGSVEKRTAARKAMFDAIDAKAGTSRGWIGCAQFVDWAFTHVAGKAGSIGATEVDLYHVQNYSEGDLLKTLEVACSDKNSREYAGLYEFLLTLF
Ga0031665_1330014	Ga0031665_13300141	F011659	LQLLRSQHKMARLLLVAALCLASAKAAVIPVEEIVDNLQSFLTAPEESGLRLKRSTGEWDKEFDLSSMGILFQLKYNNPANPFEGGRAHVKVPGARFIRNAPFDDMDLDIEFNGGSAIDGLFDMKVNYKFIQKFMFLADRPQEGSFVLYRKMEGGMWKTKVTVDNNNMMPKPFLDISVESDRKTKLHVLFNFQEDNKWELKVDRVPGQKMTIEVTVNGQKWTGVGNLNQ
Ga0031665_1332584	Ga0031665_13325841	F049565	VVDRGSVVDSMVSGVVDNRDGVGNNLVVLLPAGLSVEGEGDLLAAGLPDDDLLLVNGVGGIDELGNVEALVLNLVLALDLSDGDVLGDADLLGGRVGKAALDSEGSSDKGNLVGLGLVLLMADLVLTMVGVGSVAVGRGLDSTSGDLHGLRLLVIGDLGGLAVSDNIFPLVDIGADLPLDNSVGLLADGEDTVEAVVVVNNLLDRQGDRGHLLGKGGHADLSVNRCVGVPAQKLRSMVDGMGNGMVAGMVDSMMLSTGKCNQGRKNEAPHVDCLK
Ga0031665_1334353	Ga0031665_13343531	F070259	MKLSFMKLESLVIVNHHVTVNDLSNFAHTAHHARRVMLAGHLS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300006717: Metatranscriptome of deep ocean microbial communities from Atlantic Ocean - MP0548 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences