Sample 3300006385

3300006385: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 Surf_B metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300006385 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119659 \| Ga0079050
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 Surf_B metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	157366985
Sequencing Scaffolds	57
Novel Protein Genes	62
Associated Families	45

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1
All Organisms → cellular organisms → Eukaryota → Sar	4
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	1
All Organisms → cellular organisms → Eukaryota	2
Not Available	26
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. AW25M09	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	1
All Organisms → Viruses	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Mallomonadaceae → Synura	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium TMED271	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000351	Metagenome / Metatranscriptome	1248	Y
F001145	Metagenome / Metatranscriptome	765	Y
F001219	Metagenome / Metatranscriptome	744	Y
F001504	Metagenome / Metatranscriptome	681	Y
F003068	Metagenome / Metatranscriptome	509	Y
F004235	Metagenome / Metatranscriptome	447	Y
F004869	Metagenome / Metatranscriptome	420	Y
F005911	Metagenome / Metatranscriptome	386	Y
F006348	Metagenome / Metatranscriptome	375	Y
F010164	Metagenome / Metatranscriptome	307	Y
F011083	Metagenome / Metatranscriptome	295	N
F013415	Metagenome / Metatranscriptome	271	Y
F013644	Metagenome / Metatranscriptome	269	Y
F019484	Metagenome / Metatranscriptome	229	Y
F020014	Metagenome / Metatranscriptome	226	Y
F020701	Metagenome / Metatranscriptome	222	Y
F022752	Metagenome / Metatranscriptome	213	Y
F024323	Metagenome / Metatranscriptome	206	Y
F024798	Metatranscriptome	204	Y
F028188	Metagenome / Metatranscriptome	192	N
F028816	Metatranscriptome	190	Y
F029129	Metagenome / Metatranscriptome	189	Y
F032679	Metagenome / Metatranscriptome	179	N
F039683	Metagenome / Metatranscriptome	163	N
F040127	Metagenome / Metatranscriptome	162	Y
F041824	Metagenome / Metatranscriptome	159	N
F042354	Metagenome / Metatranscriptome	158	Y
F048556	Metagenome / Metatranscriptome	148	Y
F049683	Metagenome / Metatranscriptome	146	N
F054923	Metagenome / Metatranscriptome	139	N
F054943	Metagenome / Metatranscriptome	139	Y
F070259	Metagenome / Metatranscriptome	123	Y
F071278	Metagenome / Metatranscriptome	122	N
F072425	Metagenome / Metatranscriptome	121	N
F077350	Metagenome / Metatranscriptome	117	Y
F082815	Metagenome / Metatranscriptome	113	Y
F084268	Metagenome / Metatranscriptome	112	Y
F084330	Metagenome / Metatranscriptome	112	Y
F088945	Metagenome / Metatranscriptome	109	N
F090440	Metagenome / Metatranscriptome	108	N
F090441	Metatranscriptome	108	N
F092219	Metagenome / Metatranscriptome	107	N
F093978	Metagenome / Metatranscriptome	106	N
F101219	Metagenome / Metatranscriptome	102	N
F103871	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0079050_1000054	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
Ga0079050_1011103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	503	Open in IMG/M
Ga0079050_1013699	All Organisms → cellular organisms → Eukaryota → Sar	830	Open in IMG/M
Ga0079050_1014337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	587	Open in IMG/M
Ga0079050_1021755	All Organisms → cellular organisms → Eukaryota	1313	Open in IMG/M
Ga0079050_1029041	Not Available	525	Open in IMG/M
Ga0079050_1029782	Not Available	952	Open in IMG/M
Ga0079050_1029804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2657	Open in IMG/M
Ga0079050_1035140	Not Available	1182	Open in IMG/M
Ga0079050_1038820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	682	Open in IMG/M
Ga0079050_1049187	Not Available	685	Open in IMG/M
Ga0079050_1054282	Not Available	1099	Open in IMG/M
Ga0079050_1066335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	531	Open in IMG/M
Ga0079050_1097031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. AW25M09	500	Open in IMG/M
Ga0079050_1098733	Not Available	509	Open in IMG/M
Ga0079050_1115310	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
Ga0079050_1179729	All Organisms → cellular organisms → Eukaryota → Sar	595	Open in IMG/M
Ga0079050_1182237	Not Available	513	Open in IMG/M
Ga0079050_1196773	Not Available	510	Open in IMG/M
Ga0079050_1199180	Not Available	878	Open in IMG/M
Ga0079050_1201471	Not Available	551	Open in IMG/M
Ga0079050_1205675	Not Available	1028	Open in IMG/M
Ga0079050_1243433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	591	Open in IMG/M
Ga0079050_1246712	Not Available	824	Open in IMG/M
Ga0079050_1257749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	540	Open in IMG/M
Ga0079050_1300292	Not Available	719	Open in IMG/M
Ga0079050_1300435	Not Available	925	Open in IMG/M
Ga0079050_1300935	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
Ga0079050_1303693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → unclassified Kanaloavirus → Kanaloavirus sp.	510	Open in IMG/M
Ga0079050_1311289	Not Available	550	Open in IMG/M
Ga0079050_1315280	All Organisms → Viruses → Predicted Viral	1437	Open in IMG/M
Ga0079050_1320316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	541	Open in IMG/M
Ga0079050_1324085	All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	830	Open in IMG/M
Ga0079050_1328879	All Organisms → Viruses	760	Open in IMG/M
Ga0079050_1331963	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	730	Open in IMG/M
Ga0079050_1332574	All Organisms → Viruses	502	Open in IMG/M
Ga0079050_1337164	Not Available	668	Open in IMG/M
Ga0079050_1344580	All Organisms → cellular organisms → Eukaryota → Sar	1559	Open in IMG/M
Ga0079050_1346882	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	1895	Open in IMG/M
Ga0079050_1346901	Not Available	668	Open in IMG/M
Ga0079050_1348385	All Organisms → cellular organisms → Eukaryota	578	Open in IMG/M
Ga0079050_1351685	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Mallomonadaceae → Synura	994	Open in IMG/M
Ga0079050_1357290	Not Available	701	Open in IMG/M
Ga0079050_1369749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1165	Open in IMG/M
Ga0079050_1375921	All Organisms → cellular organisms → Eukaryota → Sar	517	Open in IMG/M
Ga0079050_1381893	Not Available	1674	Open in IMG/M
Ga0079050_1383526	Not Available	909	Open in IMG/M
Ga0079050_1390952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	904	Open in IMG/M
Ga0079050_1397981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium TMED271	650	Open in IMG/M
Ga0079050_1398203	Not Available	780	Open in IMG/M
Ga0079050_1406508	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	645	Open in IMG/M
Ga0079050_1412383	All Organisms → Viruses → Predicted Viral	1682	Open in IMG/M
Ga0079050_1415502	Not Available	793	Open in IMG/M
Ga0079050_1417507	Not Available	753	Open in IMG/M
Ga0079050_1418529	Not Available	614	Open in IMG/M
Ga0079050_1428253	Not Available	827	Open in IMG/M
Ga0079050_1429290	Not Available	539	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079050_1000054	Ga0079050_10000541	F092219	MKKFITALAATFATVVIGSAASAATPTFNVYHEEVLPALVETNAPATFSVYHEEILPALVAANTPPTFNVVREEILPAMNKAVASMPVTFAEVYGDIVYHEEVVPVADADPFSEHVVGGLGPQLPYDPMRGVDYGFVQALLQQNADPFAEEIVGGLGPQGDIDPFAEEIVGGLGPQGDIDPFAEEIV
Ga0079050_1011103	Ga0079050_10111033	F004869	MSYDTEHYYALHTFLEDDELHEIWNIVEKAMNREGYDVSNSELSMRLYDSELEENIEHDMENLLSSLSEGKDQPVDKVAQ
Ga0079050_1013699	Ga0079050_10136992	F001219	MIFTTTFFINKLFDFDLTFVIELALFITLAVIVTFKFINPISKEIDDRAEFINYNLRKSTILLTFGYEKLSDCISLLTEEINELNRQTKLTRNYSNLKFENEVGSIQKENLKILSKLKGDLSIKSAFLFSNVSGDLNSLTDKFFAKKFQSAS*
Ga0079050_1014337	Ga0079050_10143372	F029129	MTNRTFIIEVKEDGTSKVNMYGDKLHSLIDDLGWEYQRMGMSGRETYDEICHLLGMIPEDEVYMEI*
Ga0079050_1021755	Ga0079050_10217552	F020701	KDYTQLFHTSSHPSIIIMSEIESQNTSVEVPEQTAFNKSFRPIIGTCLAISALAAMALTSSPSGAVNPGKPIASTTQLEVVKQGKQPIKDGCANIYGSDPDQVFIDPDTGLRVLTAVFTICDDRSLNGVALDSLGFDHQNDIDIGLTYVETGPGCWLTLYDGPNFNGKTAVISPETSMHLKHVGARNWNDLTRSITTRSSTGDGVALYLSHRVALGSVNDHCVAMYNANPEIFPKADGLYLCGDKNAAKTWNFDLADIIEQGFNIDGSHFGIKYLMSGRKVKLSIFDGPTRNTVSHGPLEMSGHETLDLETVKYGDDHWDSKAKSFTLVEV*
Ga0079050_1029041	Ga0079050_10290412	F090440	EISGLKLATDLRLERIYHCRITDVGEDDDLRIIIRKSVGG*
Ga0079050_1029782	Ga0079050_10297821	F090441	VWELATLSFPDSLALGALITRRVIVGCQFPDAASYRKNDCNMFRFHSET*
Ga0079050_1029804	Ga0079050_10298043	F001145	MDLNTLSFFINDEPLVQLNPNILESNVQNIVILLGILIYANNVSFSVSLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKMLYEKDKVDLVTNKYKIVKSGLEETFDTTENLIKNFESKAFISVQRYMIFITASRILRKFLFLSEAEQSKIVEITISKLGGVK*
Ga0079050_1035140	Ga0079050_10351402	F103871	MVQIPGLILDFSKKKPPTKAGLKDLGALAGFIKRPQVAL
Ga0079050_1038820	Ga0079050_10388201	F041824	LQNRPIYHLIDRSTTQAIGRGLEQAQELHHGKHVFQWKVIRIL*
Ga0079050_1049187	Ga0079050_10491871	F005911	MLKNKILNFLNSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKAKIDGADINQARLGSGDEDQIEAPINELFHNGNFIKLSEMVKKAVIIVSDDPTATARKGYDIGYDTENSGVLIKFAAADGNVIQPDQGDADDTIVADVHLFVNLAGTADTDANAPYVDGTPFYYILMDAT
Ga0079050_1054282	Ga0079050_10542822	F077350	EVAVTDSALANQIQKTEADPNQTDIQALLEELENKLRGALDVLSPSVKAMCDNLHQAAVDIREEKDATMLWGTLNDLQVFLSLVQQICTSVGTQGPSVVEFDNALGESLGTLETVVVDSEDPEEVAVFIEESLIRAFDKWPNAEAELRKIADV*
Ga0079050_1066335	Ga0079050_10663351	F041824	QNRPIYHLIDRSTTQAIGRGLEQVQELHHGKHVFQWKVIRVL*
Ga0079050_1097031	Ga0079050_10970311	F101219	SLPLVFATFFFVWKNLALEVTPESFQQETSQPVDDQVVEPVAPSMAKVENTETEVAQLGSHEEPVEKIENDIRIAPSQAPPVSNSKPRVLEILEDVKIATKESVIKNAEGKQALDTRISLVETSMKHPLMILEEKGTKFGQTGEEVITANAHVATHFMLQVVPGTN
Ga0079050_1098733	Ga0079050_10987331	F101219	LYMKKYIISLPLVFATFFFVWKKQALEVTPESFQEERTQPVDDQVVEPVAPSIAKVENTETEVAQLGSNEEPVAKIENDIRIAPSQAPPVGNSKPRVLEILEDVKIAIKESVIKNAEGKQALDTRISLVETSMKHPLMILEEKGTKFGQTGEEVITANAHVATHFMLQV
Ga0079050_1115310	Ga0079050_11153101	F084268	MLFLLATPEYNNIQSNTTKVRVHLRNGVAEIFDQHQDLMGKVDNNIVEIETNFENKVEKLLFVLQDAVFIVSNQGLDANADEKGTGIYVYAKKVKEIT
Ga0079050_1179729	Ga0079050_11797291	F013415	MNDSATDKASKSTEMEHKTTKKTNAESKLTETKKDLEGTQKELDAAMEYYEKLKPSCVDAGVSYEDRVARRKEEIQSLQEALKILNGEDLAFLQKK*
Ga0079050_1182237	Ga0079050_11822371	F004235	MPIAPNRTVAPLIGEANRFIGKEITMISVDWDVDADGSREAMEAVINTILSRATILAAGAVYDTVNKQDYLLEGDFTSTLNDYTSIDGTVTGTLAQVLVEDIINLGTVDSINFGSGTVACTIKTTFKYA*
Ga0079050_1196773	Ga0079050_11967731	F040127	SQFIELGIGQFVSIGYEHTPDSVTTPTHTPREDGNTNLSSGSKVSVDFNDLNTTYLRVNLPFAAGVYVKAGTVSTDLDIKESLAGGRSYKNVSTDGSVIGVGYHKFINDSRIGVRLEGSYLELDNVSTDNGVSKTGATVANGGRNQVDASNLEGLQAKVAITITLGKD*
Ga0079050_1199180	Ga0079050_11991801	F048556	NNRDMTVAVGNNGWVGFGHKNGNGMRYAAFNCNLGQSLGTADTGRIYIGWQDFNGSTTTSYGANQGAQYYTKFHTTWDGTWGMIYSPYYYYGCGLNAFCMSLENPRKFISVNNTKSDRSNPWLAWRRTGFHGGWSENTDDQQWRTYSFAFDPTDSDHTQDTTVYYGSTDNNDVIRDDNNLRGTTITQKTGNYSTENSRTGLHGGSHTTCYPAIMQIDWWGQYGNNSSSYGGVGHSGTDA*
Ga0079050_1201471	Ga0079050_12014712	F013644	MAQTPNRSTNMIRRQSFNGKGLTFVEVIFAQSITDSATTPESKDSVFDKVTKVIGKNGNLLGCSYRLAAAATANDAAEVSEITAGNSIDSFQFIVEGTPGQFNANDSVGDTNIDVTATIVADAEADIEADIRAVLDSD
Ga0079050_1205675	Ga0079050_12056752	F093978	DEPLMKEAFNYLKTRYREEIFNTSYNDHDQRQVLWMAYNMVEKIKGHLESVMNEGKLASKELDQLQNLTK*
Ga0079050_1243433	Ga0079050_12434331	F040127	IAIAMLALGTVTSHAFDRSVFSVTGGLAANQGVFGASATETNLTETNTAGHVKKESGVFTDSYGSRFIELGIGQWISLGYEHTPDSVSTPENKTRENRTQEAKVSVDFNDLNTTYLRVGLPFAPGVYLKAGTVSTDLDIKETMGSGSTYQNVSTDGSVLGVGYHKFFGDSKFGLRLEGSYLELDNVSTDNGVSATG
Ga0079050_1246712	Ga0079050_12467122	F072425	NIEFSKSSMLRSPIVIDSEANTATLTYNNGNAYTYNFNESFVGDLRETINKTESVGKFILAARADQRLTQVVNS*
Ga0079050_1257749	Ga0079050_12577491	F003068	TVNKESAVFTEDHQSIFGEVNVGEFVSLGFEHTPDSISTPENRRTVQADGNSTAGTTTVSVDFNDLNVAYLKFNLPGGMYLKYGYVDVNLDIKETMASGSTYANVGTEGTIAGIGYSRPLGDAGLALRVEGSYMSLDDVTTSNGVSASGATVANSGRNQIDASNLEGLNGKIALTYTFG
Ga0079050_1278612	Ga0079050_12786121	F088945	DYAKVTLNTFQVLDDADDLAAGSILLMNGRRYKVAAAQTAGSGEGGIALTETFAGSTYLQLCSGCADSLLDDTVGNGGVGTNTATSSVLETDPNFGGGFDLKRGEQLLLGSATKFDALMSVVKDQVGIFDDAYTGTPANKIELCTGAGALGAKAAEIAAGSDVAIYKV
Ga0079050_1300292	Ga0079050_13002921	F005911	MSLKNRLLKLLKSKKGNALLLATAGAIAATFSVYFFVSITTLSADSKQRVAHLYNAYQMGQSLKAKIDGADINESRLGTGNEAEVEAPIDDVFHNGNFITLKQMVKKAIIIAAKDPTATERSGSDTGYDIVNSGVLIKYADAAGAIIAATDSPEAATDTLVADVHLFVNLAGTPDVEFENKPYQAGEPFYYILMDNTSATLAADLLTISTTQYPAGILETKDGGPQ
Ga0079050_1300435	Ga0079050_13004352	F019484	FNYFLTIRGGSLKKIAKKITIKVPISKNVYTKASIF*
Ga0079050_1300935	Ga0079050_13009352	F049683	LWLKENFEAIFLWFCVICIVVSALFILKLYLNRQK*
Ga0079050_1303693	Ga0079050_13036933	F039683	MELDYDEILKCYEGVTEEHANTSFQFGLMNDTYWCLFRDHDMLEHASR*
Ga0079050_1311289	Ga0079050_13112891	F042354	ISAGLSYGSFDYKTNPGLNSEAKYTGDGGVIHLDGQLAPSLSFKLSMSDGKFDNQVLSNSEGSITYNFLQNFGVYLMSSQIKVATVNESDTSLGLSYNINASTLGIKAFVGSFTDNYGKFYTYGTNINLGVAKGSSLILSYKTEDRKQKATTMDARFVYDLSSNLGLNLGYKSTETKDANGS
Ga0079050_1315280	Ga0079050_13152801	F022752	MASLSNLLGGSGGGADHRKEGLPLFGIWGDNGNQNHNVQYRIYDSGFNNVGSPWAAVCNSTTNYRFGMLSDASHSYSYNDHSTDVSHCDLTSQDYTTWTCYLKSLYQCDQYPWAQYYTSSKDGFISWHSYHQISSSFEFTSAWSKLNHVLPEGIRPRRLFTNRLQTMREMNPGQAAGNGQIDYYDYSAKMLDTTNTYATGTGYNEKNKMLVMVHSGDEGSNTSKTIHVFKSSKCLNKVKKIKDYFDNLTSTEYWTDTWTINNNKNICVVVGNNEWVGFGYKNGNSMKYAAYNCKNGQSLGTTGAARVYIGFQDFAGSTTTSYSAENSNYLYTKFNHTWDGTWGMIYGSYYYYGVGINGFCMSLENPRKFISINQTKSSRANPYMAWGRTGFHGGYSDNTDGESWR
Ga0079050_1320316	Ga0079050_13203161	F024323	MSLLESSWFLISSLIIIIVLLVDPKSSLAGSNTNAVLGLFSSPSSGQQFIYRFSAVLIFAFFALT
Ga0079050_1324085	Ga0079050_13240852	F028188	NLHSVLLNDSFALDFICATPLEQFQILPLSAQVYPASASISSLEVCNLFPQVSTDSEFVYISGAGLAAKLTS*
Ga0079050_1328879	Ga0079050_13288793	F006348	ENTPYRNKKYIVEDLEFDPKFKNEKEIEDLNFKRDNAYGVWDAEGRNEDERINNLFNKVQDYMGVYLCSLEYCNNRPHPLTAFK*
Ga0079050_1331963	Ga0079050_13319631	F032679	NDSYREITVEANDTLTGCTGMPCQAHSLCHSGCSNPTGICWVTASNGNGCMCARGGYGGKSMCTTGSSLYCCYRAQGFCTVKCNGDNCGLVCNVCTDGSTDSWQACAYGGTINCCGQFGCVSFFGCCPHCKCQFQQHVPIPAGQFAVNGALITFQKESDTTPMSRWSGNQLFQYYAALNSASKTPRQGTPDSHCWRSDRACGCYEMQGCNNYLPVGGGGIGPNPCPDVRDHGIRGGFGGVRI
Ga0079050_1332574	Ga0079050_13325741	F001504	MSYDSEHYYAVQTFLEDDELCKIWNIIEIAMNREGYDVSNAELSMRLYDSELTENIEHDMEHLL*
Ga0079050_1337164	Ga0079050_13371641	F082815	ERILLDRWRKIKYALKINKWPLLNIHEQRLQLKKQYLESLFRKK*
Ga0079050_1340022	Ga0079050_13400221	F000351	MIFTVLLGLAAAVDMHQKVTPVQKVIQLLQGMAEKGKKEKHEEQVQFAAYKQFCDDTTVEKQRAIKEATAKMEQLVAAIQKAEADAATLAKEIAQLDEDISVYEGDKKAATEVREMENADYLTTHKDYSESVDALERAIATMKKQDYDRAQLLQVNKLEIIPEHAKKVISAFLSQGDE
Ga0079050_1344580	Ga0079050_13445801	F001219	FVIELGLFITLAIIVTFKFINPISKEIDDRAEFINYNLRKSTILLTFGYEKLSDCISLLTQEINELNRQTKLTRNYCNSNFENEISSIQKENLKILSELKGDLSIKSAFLFSNISGDLNSLTDKFFEKKFQSAP*
Ga0079050_1345777	Ga0079050_13457771	F028816	LKAAKEAEIKAGTDQSDTKTQELANTDEKLAQSKQDLDDTRMSLDADQAFLLNLKETCQMTDQEFEERTKTRQEEIQAVSQALAILSSDDAHDTFTSTFNFVQVSQKEESKRQSAEKIMYRIAKASGNPRVATLATRMRLDGFKKVTEEIDGMIADLKKEKADDVKMKDFCIEALHKNEVETEMKKRDIEALEAKIADLAAHIDELTKAIATLNAEVEETHMMVKRAGEDRELENKDFQQ
Ga0079050_1346882	Ga0079050_13468823	F010164	NRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKVLYEKDKIDLVTNKYNLVRNGLLETFTATENLILNFEKKAFISLQRYIIFVTASRILRKFLFLSEEEQSKLIEVTISKLGGV*
Ga0079050_1346901	Ga0079050_13469011	F071278	KKGGKITMSLKERLSNSLKSRKGNALLLAVAAAIASTFSVYFFVSISTLSDDSKQRVTHLYNAYQMGLSVKGKINGDSMQANKLDGTNVEDDIEDSLDPLFHNGSFITLRQMITASIIIAQMDPTTTSERGAKTPYDLDVSGVKIKFANESDAVIAPSATNRAISERASLAKVHDLHLFVNLAGTTDIIAARANGPYATGAPFYYVVMATDTETGRTDNLTD
Ga0079050_1348385	Ga0079050_13483852	F070259	MKLESLVIVNQNVTVNDLSNFAHTAHHARRIVLVGS*
Ga0079050_1351685	Ga0079050_13516851	F001145	MDFNFFSFLLNNEEAEALFQLNTNFLETNVINIGLLLGILIYANKTSFSVGLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKNLYEKDKVEVVETKYKLVKNGLTNTFSTTEELIKNFENKAFVSLQRYMVLVTASRILRKFLFLSETEQSNLIDATISKLGGFKKV
Ga0079050_1357290	Ga0079050_13572901	F019484	YFLTILGGSLKKIAKKITIKVPISTKTYTNASIFFLLN*
Ga0079050_1369467	Ga0079050_13694672	F020014	KYLVVTLYRDDPSPEYEPKKNSVSKPNAARPPTVATIQRGILPISLIVDM*
Ga0079050_1369749	Ga0079050_13697491	F001219	MTFSTTFLINAGSLFDFDLTFVLELLLFVLLALVVTNNFVGPISKEIDERAEFINYTLRKSTILLSFGYERLTECVELLTNEINEMNRQVKLTRNFVNDNFEEEVASAQSQNLKLLSKLKGDLAIQSAFLFANINDELTSITDKFFVKKFQSAS*
Ga0079050_1375921	Ga0079050_13759211	F024798	FGLRHFGLKQDPCAGCDDKLTQAYQACAKDFGNPCALELTKAGSRNTDGIKKDYGCCMKKEKHDRCLQCKSMDCSHDTCKVNKHYYNTYEHAAGEMTKDKEQAEWEAQSKEGAGWGF*
Ga0079050_1381893	Ga0079050_13818931	F019484	YFLTILGGSLKKIAKKITIKVPISRNVYTNASIF*
Ga0079050_1383526	Ga0079050_13835261	F071278	VIKKKGGKITMSLKQRLSNLLKSRKGNALLLAVAAAIASTFSVYFFVSISTLSDDSKQRVTHLYNAYQMGLSVKGKINGDSMQANKLDGTNVEDDIEDSLDPLFHNGSFITLRQMITASIIIAQMDPTTTSERGAKTPYDLDNSGVKIKFANQSDAVIAPSATNRAISERSSLAKVYDLHLFVNLAGTTDIIAARNNGPYATGAPFFYIVMATDTETGRSDSLTDSLLTVNLTQFPTGILATNQGGPQAETSVILPQDFD*
Ga0079050_1390952	Ga0079050_13909521	F042354	IMKKLYPLAILVSLIISVTTAFSQASVNSGLSYGSFNYDISGTKYTGDGGVLSLDGQLSPSLSYSLSMSDGKFDDVVFSDSQGSITYNVYPNIGIHFMGSQIRLSTVQETDTSLGLSYNINTSSLGLKVFVGSDINNYGKFYTYGTKINLGVAQGSSLILGYKTEDRKQKVTSMDVSFVYDLTSSLGLNLGYKSTETKNAAGTAVVLKGNTTYAGITYRF*
Ga0079050_1397981	Ga0079050_13979811	F084330	MASRLASVSKNIFGKAFYSNLWIAISFGLISQVIGYTKYEGYFDLYWIIIKDGYLYLNLYPSIDELSTVLFIRVFLAVFVFLTVKDKLKGN*
Ga0079050_1398203	Ga0079050_13982031	F005911	MCLKDRLLQMLKSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKGKIDGADINQARLGGKTEDEIEQPIDSVFHNGQFITLKKMVKKAIIIAADDPTATARGGVDTPYDVDNSGVLIKYADAAGAVIAPTATGSGTATIVADVHLFVNLAGTPDADSNSPYTDGEPFYYILMDAGSASLTADDLTVDLVQFPSGILATNDGGPQAEVSVILPQDAED*
Ga0079050_1406508	Ga0079050_14065081	F011083	MVYHDPYGGVWRTDGIVASTSDIIAASRVQDALRALPNEVLEGVSVKARTSSTVSLCTRFYDGVQHLGGYSETTDGAFKNSKMTTNFCETTYQLATATNKMDFTIEFADKPGQTGVQYLFEVDINKRGAGSFPTSGGLTGANAAYSVAEMNHNIHLGNLSELAECSDRGLDDGDGACECFDGFRGLACEEQEALV*
Ga0079050_1409828	Ga0079050_14098282	F054923	QGHHQHRSGLGSGRFPTGGIPWSSCWGFSGACGCYNTDGCVPVLPVGTGGRGPNPCPGVRDHAIRGGYGAVRIRFIS*
Ga0079050_1412383	Ga0079050_14123831	F054943	IIMRHLIPLTPDQVSIVQASLQSSLKYADSEYIELVDEIMKEIEDNTRFGGNL*
Ga0079050_1415502	Ga0079050_14155021	F071278	KRGKITMSLKKRLQFLLKSTKGNALLLATAGAIAATFSVYFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQANKLDGTNVEDDIEDSLDPLFHNGSFITLREMVIASIIIVQNDPTTTSERGKKIPYDVDNSGVLIKFANSTDAVIAPSATNRAIEDRANLAKVHDLHLFVNLAGTTDIDSRPNGPYAVGDPFYYVVMASDTDTGRTDGLTDALKTVNLTQFPTGMLATNQGGPQAETSVILPQDFD*
Ga0079050_1417507	Ga0079050_14175071	F090441	LALGALITRRVIIGCQFPDAVSHRKNDCKVFMAHSGT*
Ga0079050_1418529	Ga0079050_14185291	F040127	IAFAMLALSTVSSHAFDRSVFSVTAGLAANQGVFGASAKETNLTDTNTTGHIKKESGVFTDSYTSQFIELGIGQLISLGYEHTPDSVTTPTNQTRAGMAAENNVSVDFNDFDTIYLRLNLPFAAGMYVKAGTVSTDLDIKETGSSRTYQNVSTDGTMMGVGYHKFINDSRFGIRLEGSYLELDNVSTNNGVSATGGTVANGGRN
Ga0079050_1428253	Ga0079050_14282531	F005911	KEGGQMKVKTKLLKMLNTKKGNALLLATAGTIAATFGVYFFVTLTTLSEDSKQRVAHLYNAYQMGQAIKAKIDGADINQARLGSGTENDIEAPIDDLFHNGNFVTLAQMVKKAIVIIADDPTATARSGSDQAYDLINSGALIKYADAAGNVIEADSDDGSDSIPVVTDVQVFVNLAGTADATTNTPYTAGEPFYYILMDADTAGLTASDITVDATQFPTGILATNDGGPQAEVSVILPQDSE*
Ga0079050_1429290	Ga0079050_14292901	F090440	ISGLKLATDLRLKRIYHCRITDVGEGYDLRVTIHKSIGG*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300006385: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S5 Surf_B metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences