| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300006171 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0075597 | Gp0121570 | Ga0082041 |
| Sample Name | Saline water microbial communities from Bras del Port Salterns, Alicante, Spain ? SS19 |
| Sequencing Status | Finished |
| Sequencing Center | GATC-Biotech AG, Konstanz, Germany |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 28796629 |
| Sequencing Scaffolds | 4 |
| Novel Protein Genes | 4 |
| Associated Families | 4 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1 |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-7 | 1 |
| All Organisms → Viruses → Predicted Viral | 2 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Saline Water Microbial Communities From Bras Del Port Salterns, Alicante, Spain |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Non-Marine Saline And Alkaline → Salt Crystallizer Ponds → Unclassified → Salt Cristalyzer Pond → Saline Water Microbial Communities From Bras Del Port Salterns, Alicante, Spain |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | aquatic biome → saline evaporation pond → saline water |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Hypersaline (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Alicante, Spain | |||||||
| Coordinates | Lat. (o) | 38.3852246 | Long. (o) | -0.5132249 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F048548 | Metagenome / Metatranscriptome | 148 | Y |
| F049200 | Metagenome | 147 | Y |
| F056035 | Metagenome / Metatranscriptome | 138 | Y |
| F097996 | Metagenome | 104 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0082041_100571 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 3425 | Open in IMG/M |
| Ga0082041_102034 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → environmental Halophage eHP-7 | 1886 | Open in IMG/M |
| Ga0082041_102494 | All Organisms → Viruses → Predicted Viral | 1704 | Open in IMG/M |
| Ga0082041_105845 | All Organisms → Viruses → Predicted Viral | 1123 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0082041_100571 | Ga0082041_1005713 | F048548 | MKNVLIVEHNTNPLNDINENKSQKQDKYVLGGSFTEFNVKNRNERVYTWKNSNQL* |
| Ga0082041_102034 | Ga0082041_1020346 | F049200 | MPDLFLGQRLALPYESDDTSISVPAEVTGIGLPAVRVETDSGEVLIRRARNVRKWIRHMRHV* |
| Ga0082041_102494 | Ga0082041_1024942 | F056035 | MSLLYKSKEEQTTTCEIKQEGGKIVLDFYSDCGKFGTDEMLDGYKLTPERLLQILQDRDDYSEDELYPLRTTVGCICSDLN* |
| Ga0082041_105845 | Ga0082041_1058452 | F097996 | MATIKDGMHPRYLGWQVDWPVFVKMPFSANGREWKRQEHFNWAERGIDQKQVATLYATGHIYHNYELEKQNKVGDRLGELNSEQLKRLVVQLNDIVKRGTTTTKEFQDKRCKQSKLEDKQRGLIRRFLNRNQWIVEDFYEIRDYLLAED* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |