Sample 3300005819

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300005819

3300005819: Microbial communities of produced water from Jiangsu Oil field in Yangzhou, China - Well_W15

Overview

Basic Information
IMG/M Taxon OID	3300005819 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0116204 \| Gp0119460 \| Ga0078536
Sample Name	Microbial communities of produced water from Jiangsu Oil field in Yangzhou, China - Well_W15
Sequencing Status	Permanent Draft
Sequencing Center	University of California, San Diego
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	47930490
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Communities Of Produced Water From Jiangsu Oil Field In Yangzhou, China
Type	Environmental
Taxonomy	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Petroleum Reservoir → Microbial Communities Of Produced Water From Jiangsu Oil Field In Yangzhou, China

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → oil reservoir → oil field production water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Yangzhou, China
Coordinates	Lat. (^o)	32.0	Long. (^o)	119.0	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F069722	Metagenome / Metatranscriptome	123	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0078536_101215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	4377	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0078536_101215	Ga0078536_1012156	F069722	AKLDPKAKRKRPDLDKGAAHQKALGHESGAALQE*

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