Sample 3300005233

3300005233: Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI054_135m_RNA (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300005233 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0111060 \| Ga0066627
Sample Name	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI054_135m_RNA (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	150947012
Sequencing Scaffolds	42
Novel Protein Genes	46
Associated Families	44

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	22
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3
All Organisms → cellular organisms → Eukaryota → Sar	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Bilophila → Bilophila wadsworthia	1
All Organisms → Viruses → environmental samples → uncultured marine virus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	4
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → coastal inlet → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	British Columbia, Canada
Coordinates	Lat. (^o)	48.6	Long. (^o)	-123.5	Alt. (m)	N/A	Depth (m)	135
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000183	Metagenome / Metatranscriptome	1709	Y
F000244	Metatranscriptome	1468	Y
F001020	Metatranscriptome	804	Y
F001926	Metagenome / Metatranscriptome	616	Y
F002078	Metagenome / Metatranscriptome	596	Y
F002566	Metagenome / Metatranscriptome	547	Y
F005193	Metagenome / Metatranscriptome	409	Y
F007774	Metagenome / Metatranscriptome	345	Y
F009560	Metagenome / Metatranscriptome	316	Y
F010687	Metatranscriptome	300	Y
F010921	Metagenome / Metatranscriptome	297	Y
F013570	Metagenome / Metatranscriptome	270	N
F014123	Metagenome / Metatranscriptome	265	Y
F015662	Metagenome / Metatranscriptome	253	Y
F016206	Metagenome / Metatranscriptome	249	Y
F016405	Metatranscriptome	247	Y
F017402	Metagenome / Metatranscriptome	241	Y
F023217	Metagenome / Metatranscriptome	211	Y
F027810	Metagenome / Metatranscriptome	193	N
F029242	Metagenome / Metatranscriptome	189	Y
F032448	Metagenome / Metatranscriptome	180	N
F034189	Metagenome / Metatranscriptome	175	Y
F040845	Metagenome / Metatranscriptome	161	N
F041573	Metatranscriptome	159	Y
F044148	Metagenome / Metatranscriptome	155	Y
F047119	Metagenome / Metatranscriptome	150	N
F054096	Metagenome / Metatranscriptome	140	Y
F054922	Metagenome / Metatranscriptome	139	N
F055790	Metagenome / Metatranscriptome	138	Y
F060128	Metagenome / Metatranscriptome	133	Y
F060929	Metagenome / Metatranscriptome	132	N
F062674	Metagenome / Metatranscriptome	130	Y
F065210	Metagenome / Metatranscriptome	128	Y
F066454	Metagenome / Metatranscriptome	126	N
F067124	Metagenome / Metatranscriptome	126	N
F067814	Metagenome / Metatranscriptome	125	N
F070840	Metatranscriptome	122	Y
F072521	Metagenome / Metatranscriptome	121	Y
F076490	Metagenome / Metatranscriptome	118	Y
F078263	Metagenome / Metatranscriptome	116	N
F080138	Metagenome / Metatranscriptome	115	Y
F094656	Metatranscriptome	105	N
F098166	Metagenome / Metatranscriptome	104	N
F098459	Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0066627_1002257	Not Available	759	Open in IMG/M
Ga0066627_1004137	Not Available	977	Open in IMG/M
Ga0066627_1018270	Not Available	2849	Open in IMG/M
Ga0066627_1025152	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
Ga0066627_1031036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1328	Open in IMG/M
Ga0066627_1031530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1467	Open in IMG/M
Ga0066627_1032334	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
Ga0066627_1032675	All Organisms → cellular organisms → Eukaryota → Sar	1159	Open in IMG/M
Ga0066627_1034057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4420	Open in IMG/M
Ga0066627_1078440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Bilophila → Bilophila wadsworthia	522	Open in IMG/M
Ga0066627_1163010	All Organisms → Viruses → environmental samples → uncultured marine virus	562	Open in IMG/M
Ga0066627_1197994	Not Available	600	Open in IMG/M
Ga0066627_1223867	Not Available	558	Open in IMG/M
Ga0066627_1238650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1003	Open in IMG/M
Ga0066627_1242654	All Organisms → Viruses → Predicted Viral	3977	Open in IMG/M
Ga0066627_1245217	Not Available	504	Open in IMG/M
Ga0066627_1263910	Not Available	636	Open in IMG/M
Ga0066627_1266523	Not Available	508	Open in IMG/M
Ga0066627_1274121	Not Available	770	Open in IMG/M
Ga0066627_1293845	Not Available	620	Open in IMG/M
Ga0066627_1294464	Not Available	1250	Open in IMG/M
Ga0066627_1297896	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	872	Open in IMG/M
Ga0066627_1299278	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	539	Open in IMG/M
Ga0066627_1308224	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
Ga0066627_1309997	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1658	Open in IMG/M
Ga0066627_1314455	Not Available	520	Open in IMG/M
Ga0066627_1315429	Not Available	508	Open in IMG/M
Ga0066627_1319111	Not Available	642	Open in IMG/M
Ga0066627_1321617	Not Available	838	Open in IMG/M
Ga0066627_1325341	Not Available	596	Open in IMG/M
Ga0066627_1329741	Not Available	707	Open in IMG/M
Ga0066627_1329783	Not Available	718	Open in IMG/M
Ga0066627_1330929	Not Available	548	Open in IMG/M
Ga0066627_1337710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	557	Open in IMG/M
Ga0066627_1339822	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	722	Open in IMG/M
Ga0066627_1341306	All Organisms → cellular organisms → Eukaryota → Sar	551	Open in IMG/M
Ga0066627_1342004	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
Ga0066627_1349253	Not Available	786	Open in IMG/M
Ga0066627_1352219	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	524	Open in IMG/M
Ga0066627_1353589	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	836	Open in IMG/M
Ga0066627_1354911	Not Available	1348	Open in IMG/M
Ga0066627_1355542	Not Available	2131	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0066627_1002257	Ga0066627_10022572	F098166	MNILVSKDEEQSIYTTAMRFTLSDGDMLLTATTEEIDKVGAWLGKNGLTGVYTDIEEDDFIECNDFMFTSSDIDINSDNPPTFIRLLK*
Ga0066627_1004137	Ga0066627_10041371	F094656	MIQGLLAVVVGIVANALMYSFSCKFGNTKVLMVVAFFYWLATLTVGKGSSSLCGLGLLMGALAPFALFKFCLPDTPEAQAGMAIGLWGGIRALLIAVVITVIMEFVHVPGMFTRLSRDSLDKAFVAMEKAFTNVWNAKEAKKVVDEALGEVSGHLGDAETYNGACKLEPRLWKCAWKGDFLVETSAHMKKIRLDVLLIKKALCGIDGKMEEMVELINKVPEVEHMKKDLDATLVDAHELAMALLDHENGKFNGLDNLDTVEGLDELDGYDEAIVGQSKVVEFPAEVPETMENDALVRISIVYCMLEYLISHVSAMLKGSVKLS*
Ga0066627_1018270	Ga0066627_10182701	F055790	HIGAISMGAAAGNSSNVLGDVSVTTVGVAAADTYMIGIEIGKMEGFELPNFMKNGQLGYNHNAAGFGDSY*
Ga0066627_1025152	Ga0066627_10251522	F066454	MSIRLDVLILINSGVTDRSEIMEKLGVNIMSVSNCFRFLIKEGWVEYSREPVSAVGSVGYRITQVGIDKIKASTVDDYRKSPQRKVPDYEVMRSHLGVGGDVTRSELVNLWNELTDYYLPYEGDKDFTEIVVFPP*
Ga0066627_1031036	Ga0066627_10310363	F034189	SNDGQITKSGLPNDRRAKFLPSVVGFAYDLLRYEYYLGNIGLILLRRQK*
Ga0066627_1031530	Ga0066627_10315303	F034189	SNDGQITKSGLPNDRRAKFLPSVVGFAYDLLRYEYYLGNIGLRHCFA*
Ga0066627_1032334	Ga0066627_10323342	F062674	MANPMYGQNKADGAIQDGKSSVIVAGDDITLTAAQTGSTVFMNAAAKTIQLPAAAPGLNYKVIFGIDTTAGADILATAGDAFFGIIRLFSDTADQVGVPQQISHATAIGTVASYDTMDFVAATATIGGMAGDMVEICAVDDTAWHVSADLTTTANDPGTVAVIVAS*
Ga0066627_1032675	Ga0066627_10326752	F001926	VRHELIPDIDNPKTMKATLEGDKLIKEVLNGGYNVHPVPPPNSETRERTTRKYERKRSKREKLFTLGYTTSGDP*
Ga0066627_1034057	Ga0066627_10340577	F034189	NDGQITKSGLPNDRRAKFLPSVVGFAYDLLRYEYYLGNIGLIVTRQRVKR*
Ga0066627_1078440	Ga0066627_10784401	F041573	APPARQVEFVSMHGRAAPPPAPEANLAYKKSGEESNGVLAMIDTLVADLDKDNQILEVDEKDAQKDYETFMADASDKRALDSKAITDKESAKAETETELQSNTDSKKSKTIEAMETAKYLSGLHGECDWLIQNYETRKEARAGEIDALGKAKSVLSGADYSLVQTGTVAHLRG
Ga0066627_1163010	Ga0066627_11630102	F002078	MEAFMNQGWFQIAGEVVLMFTALTGAMPDRLVNKIPVLGKLWPIFNWLAGNIFNNVNHPKGMAALQEVEDELDKAKAEVKTRTGVTAVLDGM*
Ga0066627_1197994	Ga0066627_11979941	F054096	SLVKNQLENISMTVHLIRIGKMTILEGDKIKLHPKTGKAKSVINRDGSVFEVLRFEDTVLFDEGKDWINLQSIDNPKNGRWIQRFHDKNFDWELLR*
Ga0066627_1223867	Ga0066627_12238672	F007774	MSKNDKLTPEQEKELIQLTAEIEAEAIAMKMDYEEHPSHESGSVVFINEQSTLLEDEDERLGDKALVSSSQILAKELKKQKKKGDK*
Ga0066627_1238650	Ga0066627_12386502	F060929	IVVRLNNVISNEVTDNLSVDIYRDEYVAALKNEIDNAYVDDLRSLADIEYNPQVIQFRN*
Ga0066627_1242654	Ga0066627_12426542	F067814	VSRTKDTNKKEKIKEKEKVSRSVTSKAELKDVEIVSEIIEQKAGVRTNNSLPSTYTKIQLRNGTIKETYGERYGKPANG*
Ga0066627_1245217	Ga0066627_12452171	F029242	CMNDDVPHDIGYVLGNGPSRDRSRTRYEGVTYGCNSIHTEMGVDVLVCMDTWYQFEVIASGYPAKHKCLFGGYNPIPIDIPPESLNPPHYDIHYYNPKDREFADNWYYYATSAADYEKAKKENYALSYWKPDCGYVCYIPEGYKIKELDYGVIPIGDLRPPSGAYAL
Ga0066627_1245695	Ga0066627_12456951	F000244	YLSAMKIVLVAAAVGTAHSNAVTPVQKVIEMMNGMLEKGKKEKHEEQVQFAAYKQFCDDTSVEKKRAIAEAEETIEVLKADIEKAISDAASLTKKIAELDEDIAVWKGDVKAATKVREIEKADYDETHKDYSESVDALERAIGVLKKQDHDRKQAALLQVASQSLVPEEAKRTIDAFLA
Ga0066627_1252194	Ga0066627_12521941	F016405	AVKTAEMENDLEDTKEDLEESKKFLADLDVNCEKKKKEWAVYQKMQGEELLALADTIKILNDDDALELFKKTLPGSASFLEVKVKSKSLQQKALSVLRANRPVRNADPRVDFLEVALHGGKIGFEKIITMIDKLVVQLKTEQTDDDAKKSYCETEFDKAEDTKKGLEQDISDFETAIADAEE
Ga0066627_1263910	Ga0066627_12639101	F076490	VSRTNYSTLGNFFEFDEDDLEFERVTNNIDTVDIDYGVEVIFKYYRKHGFPHYKIREDEKHSHMRKLRKFDTTTIFEDKKI
Ga0066627_1266523	Ga0066627_12665231	F017402	IMANDHAQDRYAPPGVGSDFEEQIYGDIVRGEVFRLKPINSEKSYRKVDELKCHDILENQTKQFDLKLKVYVKS*
Ga0066627_1274121	Ga0066627_12741212	F065210	VIDMEIKKEQFKSYDGIHELIISHSSHIRSIDIAQHILDLQNEVTMLKNIIEDFRQKEKKIGEGT*
Ga0066627_1293845	Ga0066627_12938452	F002566	MNYLKWKLSDAGVSGTGPEETIDTRVGLAEASWAVDGDGYRIGYLTQTANLDDLDTWDVTEVTEAQALTFCQNLYADAEVLPDGRISGPPDDDPV*
Ga0066627_1294464	Ga0066627_12944642	F009560	MTFEENRKSFLDSLFSISTLLKRWHTEIQNKDVDKNYMIEKLTLWIKKLEKLRHDIMMRKS*
Ga0066627_1297896	Ga0066627_12978961	F072521	MKLGDNWYVHAPWAQLVCCTEIPEDKLVKFYAISNEIMDEAATSEDNHGGGVIPLPWAISDDKFVKYDVKKYLMEMVENYMKTILNNGNVGSNLDELIPGGPHTQWHTRIVDAWVVSQKENEYIPVHTH
Ga0066627_1299278	Ga0066627_12992782	F016206	KTKKKVSKVMGEILKAPKKVEKTVEVAAKYVNETHWDTKEAFAAAIDKSGLSADQVNVNSEWDLYQSDTDGYRNHLKLEN*
Ga0066627_1305551	Ga0066627_13055511	F001020	VPAYSKKSGESGGVTQMIDLLVKDLDKQMTVGETEEKDAQADYEQMTKDAAAKRASDAASLSDKESAKADTEAALQAHNDDKTSASKELLATNQYIASLHAECDWLIQYFDIRKEARDSEIDSLGKAKAVLSGADFSLMQVRSGSRGFLQQRA*
Ga0066627_1308224	Ga0066627_13082241	F040845	TDKDRPAFKTPAQIKEDKLNEMDDDKRAFLMLKIYGQSWGVNMGKVFSGINKGKPTMIKKGLKEIKILNKKIEEMIEDLV*
Ga0066627_1309997	Ga0066627_13099971	F010921	MALNAKGGVKIIEGKAYIHPLSIQEIEFLLNLLANTEHKGSELQKVMQVTYKLREEYKLI
Ga0066627_1314455	Ga0066627_13144552	F060128	MTDNFDFGFSAVSTDEFKKTQADTEPAPSTGVSSTEFNELKEKIDSISSLIQILGDNNDTSLFDETGEIVAATGEKI
Ga0066627_1315429	Ga0066627_13154291	F023217	ASSKKIDKGLKAFGKSIGLDKPFFAAKTFDDVTGTWKVCPCCGGDSLEADILKLI*
Ga0066627_1319111	Ga0066627_13191111	F098459	MAQSVILQAEIGSLGGNIADAYVENFDIATQGTIRVLYEKHASMLGEIYDILNALQFALSTEDFGPSHVTCMDAIGEASQDLVDAASLVLITATTCSEDGIIDRDESADLEAKEKNVTKAIKNLSAAFNDMRKKFGKPVCKELMNESFFVFCLSAFGRLTVEYSTTLRTNPPQGKAFVSEMSASAKEMITIPMWYHYRVVSRYWLSLMGCFLF
Ga0066627_1321617	Ga0066627_13216172	F080138	MTILELMERAGTNETTLSIAWIKDAIHLIQSNSKERLKVSKYDVIKSVDSDDNRYLLPADMIALESISIKDTSDSKYKKIKRLTSQPGYMVEDTSP*
Ga0066627_1325341	Ga0066627_13253411	F054922	DGFVPSPEGIYPCHVVAVNSREYNGNKVFNFQFQVADEVSKLQLPKMVSDGNGWYVAAKDDRGDVVTQPGKPFSGRKFYSKGVWFTPDPMKEERWKNRIYKDFCENLGVIFRTEGDDTILDEVEEADVVGKPCLASVITNEYEKDGETKRTMQVNNVTTWKDGVMLSADELDSDVPF*
Ga0066627_1327388	Ga0066627_13273881	F000183	ACAHKSASCAQQKSQALFCQLLRRSKPEAAEEACNNSEAPASLVQISLRKAPEDELAKEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLAHLHEDEAPVETDKLKSFH*
Ga0066627_1329741	Ga0066627_13297411	F047119	FNLTMPDNERPISGFYSGWCSQYGNDFSWQGTYDQYTPLEVCPWCHGNHTCDIGRVVPLLDPEEIEHDLNENGHRPDEVNVYPGVPGDFRPVVYIYLDELPPDRSWADIIRNRQMRHIAMRQHTTEVHFFARTRDSMSWQLSDTRNVMTQSITNWLRFTDPSFTRVITFRTRDGQINRRY
Ga0066627_1329783	Ga0066627_13297831	F015662	GIMKKQLIEELIEDENAEIDFVEISSEVSARVELKADMARERARERIQMEMYDDPYLNWSGHR*
Ga0066627_1330929	Ga0066627_13309292	F067124	MKQSEMKRVKRVINYRDRVTQQEYNVDSKIVSTRPTHKVK
Ga0066627_1337710	Ga0066627_13377101	F032448	LIYFYILFLCGCGTKGDLYIPEEKYPQSQLEKYEDESFIEDKQFA*
Ga0066627_1339822	Ga0066627_13398222	F027810	MAKIKMNVTSEDEGIPKVGLEAFNDLAKSHDAHVKEVERLQKELDELNKLKLVDQHGELLLECRIGDENHRLLLEVGLNTILEKILKEEK*
Ga0066627_1341306	Ga0066627_13413061	F010687	AKDLIEMAKTRLNKFYNPALALVSRPTSFLQVRQPAPESLALFQKKAEESNAVIAMMDTLVADLDKETQIAEADEKDAQADYEKFMADSKTMRADSGKILEDKTAAKADATGALQTHEDDLEVNMKKQKGSEDQLRALHQDCDWLLSNFDSRKEARNDEIDSLGKAKLF*AVQTRRHATRLNS
Ga0066627_1342004	Ga0066627_13420043	F014123	MGHWIVIGKAAGWDDLATFTAEMKATNKWRLNPRTTVTSVIALEDGRLLAECHAANQSDFEPWLEDKGWEVESITPIRHMARTGEIWKIS*
Ga0066627_1349253	Ga0066627_13492531	F070840	MPKDVEKGEQSPLVLGNTKLLEALGSYRGENKRGGLGTLPDVPVGGHPGNDHFYDVVQLAVRLTVMCMLIGCMVWLPDTTKAMGMQRFAPFAGLAACLMCFFSTYSIGGVLQTASAGVSGCFTACLNIFLLRGFFPDGVTPGMGFTSTPSIVGWLDLALFNLAVLGFNCRMGFRMTGMAVNVGFMMCFLNPADKTVFSKNFQINPNGAAVTTFLGVCIGSLCAILAVGLPYPLGWATKNMKAAGMTA
Ga0066627_1352219	Ga0066627_13522191	F005193	MKIKNAIFENKQYFETIGKIHTSDQLSVMDAYRINRLVKKLNELNTEYDELKKKILTQYGTPGEEEGMVVIESENKEAFAGEYNNLISIEHDLETEKLPFPNKIEDGISASDLNILELFFDL
Ga0066627_1353589	Ga0066627_13535892	F044148	VLNPHSRQRWEEALRQVYAVNEESVEVKEASNTSWMDVQAKKVESKWKSMNKSARKKWLSSMADMAADEKTKQSVLDDVLDDYGLTEAYTDLGGDGGEEGTTTSETDKDYDLHQFSDPKYVPAYTDKSFQTAPDKTGIGQDLGDKQSGTPKKAKGQATAAKTPAKVDAKTGHEKPAVGTKSDTPDKAIGKADSAKIAPRVTTKAGVATQKEEVEIGEKITEKRSIAFARKFYQKEKNNV*
Ga0066627_1354911	Ga0066627_13549111	F078263	NALLFLSIFMEVFVMELLHDSDGLEGSLDCQLKRLEEKIETSQPVALMKDLHRIDDEIKHFKDVEITTNTVVSSVKEHDETIKKLEERTRDKFAEMTSQNKATEAMVADKHNDLISKINGISSRVDNLEEKIELAVRELKSEARKTSFLRKLLWLD*
Ga0066627_1355542	Ga0066627_13555424	F013570	MELEKIKKKREELMTNYNSLVDKRIELEKQLEITNTDILTMRGAILLSNEFIEEEENPEPKPLFPEKEVVVNDLDKEKDGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300005233: Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI054_135m_RNA (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences