NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300003631

3300003631: Hypersaline viral communities from Bras del Port, Santa Pola, Spain - LoValdivia P1



Overview

Basic Information
IMG/M Taxon OID3300003631 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0069917 | Gp0107654 | Ga0061048
Sample NameHypersaline viral communities from Bras del Port, Santa Pola, Spain - LoValdivia P1
Sequencing StatusPermanent Draft
Sequencing CenterLifesequencing S.L.
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size19344232
Sequencing Scaffolds18
Novel Protein Genes19
Associated Families7

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W3
All Organisms → Viruses → Predicted Viral5
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. JWXQ-INN 8581
Not Available1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi461
All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus3

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biome → saline evaporation pond → hypersaline water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Hypersaline (saline)

Location Information
LocationBras del Port, Santa Pola, Spain
CoordinatesLat. (o)38.192206Long. (o)-0.591865Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F057206Metagenome / Metatranscriptome136Y
F062489Metagenome130Y
F066493Metagenome126Y
F079661Metagenome115Y
F097996Metagenome104N
F098766Metagenome103Y
F104555Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
MetavP1_100028All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W23148Open in IMG/M
MetavP1_100534All Organisms → Viruses → Predicted Viral4270Open in IMG/M
MetavP1_101533All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum2219Open in IMG/M
MetavP1_102264All Organisms → Viruses → Predicted Viral1758Open in IMG/M
MetavP1_103567All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halonotius → Halonotius terrestris1335Open in IMG/M
MetavP1_104008All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Haloarculaceae1224Open in IMG/M
MetavP1_104429All Organisms → Viruses → Predicted Viral1144Open in IMG/M
MetavP1_104783All Organisms → Viruses → Predicted Viral1085Open in IMG/M
MetavP1_104856All Organisms → Viruses → Predicted Viral1076Open in IMG/M
MetavP1_107090All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum834Open in IMG/M
MetavP1_107984All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. JWXQ-INN 858768Open in IMG/M
MetavP1_109268Not Available686Open in IMG/M
MetavP1_110144All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kirjokansivirales → Graaviviridae → Seejivirus → Seejivirus CGphi46641Open in IMG/M
MetavP1_111430All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus584Open in IMG/M
MetavP1_111632All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus577Open in IMG/M
MetavP1_111974All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W565Open in IMG/M
MetavP1_112332All Organisms → Viruses → Monodnaviria → Trapavirae → Saleviricota → Huolimaviricetes → Haloruvirales → Pleolipoviridae → Betapleolipovirus553Open in IMG/M
MetavP1_113491All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → unclassified Halorubrum → Halorubrum sp. 48-1-W517Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
MetavP1_100028MetavP1_10002828F062489MSGPAAIILRERVAEGPTRRIVWHPLTSGGYERSEQLWRLAKEGWHTTGTEIVDALAIDCPRGQR*
MetavP1_100534MetavP1_1005343F066493MSDAEREWTDGVIDVAEELVKRHSADGAIERLQTRRQTTDDELQARCTEAIAWIRREVQGDE*
MetavP1_100912MetavP1_1009124F104555MTDRLDEILEGCGADIAALPLSDHDTIRQAVRRSIEHNGIHATGEHWAAVLDIIGPAPKEWIDTVKIVFNQEVAECF*
MetavP1_101533MetavP1_1015335F066493MSDAEREWDDGLVDVADELVSEYSAAGAIDRLQRRRASTTNDELADRCVAAIAYIRREVQDHES*
MetavP1_102264MetavP1_1022641F079661VGKALQTIGLPLFEMSQTTIQISEELRDELRNERKSHESNYGDTIERLLDDGTGGQLWTERELKDLIQREIEQVSRR*
MetavP1_103567MetavP1_1035672F098766MTHPTCAVCGREADGADHVRVEVERVPPERPPETYYFHKRCFERSQGWEQR*
MetavP1_104008MetavP1_1040081F066493MSEREWDDGLVDVADELVSEYSAEGAIDRLQRRRASTTSDDLADRCVAAIAYIRREVQDDER*
MetavP1_104429MetavP1_1044291F079661MSNTTIQIPTDLRDELRDERLPHESNYGETIDRLLDDSDGGQLWTQSEIEDIVDNRIEAARRTR*
MetavP1_104783MetavP1_1047833F098766MTHPTCAVCGREADGGDHVRLDVERVPPERPPETYYFHPRCFDRAQDWEAGL*
MetavP1_104856MetavP1_1048563F097996HPRYLGFQVDWPVLVKMPFSADGKHWKKSEHFNWAERDLEMKDVASLYAQGFIYHNTELAKVNKIGDRLGEMNTEDLYRLVVQLNGIVKERTTTTKEYNDKRCKQSKIEDKQRGLIRRFLNRNPWIVEDFYKLRDHILGE*
MetavP1_107090MetavP1_1070901F066493MSESEREWTDGVIDVAEELVHRHSADGAIERLQRRRQTTDDELQARCTEAIAWIRREVQGDE
MetavP1_107984MetavP1_1079843F098766AVCGREADGADHVRLDVERVPPERPPETYYFHPGCFERAQDWEAGL*
MetavP1_109268MetavP1_1092682F057206MNYVIYVLCFFTILNFIGISIAIARVAQFRKSVHGLDWEAVATLLGDVATVKRSITRLNGRLNGMDNAQPQFDWKDQAAQVLSQPPKPAAKGG*
MetavP1_110144MetavP1_1101443F066493MTDAEREWTDGVIDVAEELVHRHSADGAIERLQTRRQTTDDELQARCNEAIAWIRREVQGDA*
MetavP1_111430MetavP1_1114302F098766MTHPTCAVCGREADGGDHVRVEVERVPPERPPETYYFHKRCFDRAQAWEAGL*
MetavP1_111632MetavP1_1116323F098766MTHPTCAVCGREADGGDHVRVEVERVPPERPPETYYFHPRCFDRAQDWEAGL*
MetavP1_111974MetavP1_1119741F098766MTHPICAVCGREADGGDHVRVEVERVPPERPPETYHFHPRCFDRVQD
MetavP1_112332MetavP1_1123321F098766MTHPTCAVCGREADGADHVRVEVERVPPERPPETYHFHPRCFDRAQAWEQE*
MetavP1_113491MetavP1_1134911F098766MTHPTCAVCGREADGADHVRLDVERVPPERPPETYYFHPRCFDRAQDWERE*
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