Sample 3300003503

Basic Information
IMG/M Taxon OID	3300003503 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110179 \| Gp0089080 \| Ga0008482
Sample Name	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	46414042
Sequencing Scaffolds	71
Novel Protein Genes	74
Associated Families	74

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	13
All Organisms → cellular organisms → Bacteria	19
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Candidatus Burkholderia verschuerenii	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9
All Organisms → cellular organisms → Bacteria → Proteobacteria	4
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1
Not Available	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1

Ecosystem Assignment (GOLD)
Name	Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere → Arabidopsis Thaliana Rhizosphere Microbial Communities From The Joint Genome Institute, Usa, That Affect Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Location Information
Location	Joint Genome Institute, California, USA
Coordinates	Lat. (^o)	37.931388	Long. (^o)	-122.021761	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F002465	Metagenome / Metatranscriptome	557	Y
F002551	Metagenome / Metatranscriptome	549	Y
F003529	Metagenome / Metatranscriptome	481	Y
F003633	Metagenome / Metatranscriptome	476	Y
F004749	Metagenome / Metatranscriptome	425	Y
F005275	Metagenome / Metatranscriptome	406	N
F005683	Metagenome / Metatranscriptome	393	Y
F006025	Metagenome / Metatranscriptome	383	Y
F006926	Metagenome / Metatranscriptome	362	Y
F007181	Metagenome / Metatranscriptome	356	Y
F008142	Metagenome / Metatranscriptome	338	Y
F008438	Metagenome	333	Y
F008809	Metagenome / Metatranscriptome	327	Y
F008966	Metagenome / Metatranscriptome	325	Y
F009097	Metagenome / Metatranscriptome	323	Y
F009617	Metagenome / Metatranscriptome	315	Y
F010431	Metagenome / Metatranscriptome	304	Y
F012367	Metagenome / Metatranscriptome	281	N
F012397	Metagenome	281	Y
F013352	Metagenome / Metatranscriptome	272	Y
F014324	Metagenome / Metatranscriptome	264	Y
F014557	Metagenome / Metatranscriptome	262	Y
F015846	Metagenome / Metatranscriptome	251	Y
F017546	Metagenome / Metatranscriptome	240	Y
F017860	Metagenome	238	Y
F020931	Metagenome / Metatranscriptome	221	Y
F021936	Metagenome / Metatranscriptome	216	Y
F022904	Metagenome	212	Y
F023901	Metagenome / Metatranscriptome	208	N
F023903	Metagenome / Metatranscriptome	208	N
F024604	Metagenome	205	Y
F026346	Metagenome / Metatranscriptome	198	Y
F027059	Metagenome	196	Y
F031150	Metagenome / Metatranscriptome	183	N
F032456	Metagenome / Metatranscriptome	180	Y
F035105	Metagenome / Metatranscriptome	173	Y
F036766	Metagenome / Metatranscriptome	169	Y
F036952	Metagenome / Metatranscriptome	169	Y
F037262	Metagenome / Metatranscriptome	168	Y
F038323	Metagenome	166	N
F040299	Metagenome / Metatranscriptome	162	Y
F040514	Metagenome / Metatranscriptome	161	N
F042938	Metagenome	157	N
F046045	Metagenome / Metatranscriptome	152	Y
F048397	Metagenome / Metatranscriptome	148	N
F054648	Metagenome	139	Y
F054952	Metagenome	139	Y
F055515	Metagenome / Metatranscriptome	138	N
F056735	Metagenome	137	Y
F057707	Metagenome / Metatranscriptome	136	Y
F058471	Metagenome / Metatranscriptome	135	Y
F058905	Metagenome / Metatranscriptome	134	Y
F067960	Metagenome	125	Y
F072449	Metagenome / Metatranscriptome	121	N
F072495	Metagenome	121	N
F072698	Metagenome / Metatranscriptome	121	N
F075479	Metagenome	119	N
F077482	Metagenome	117	N
F081178	Metagenome	114	Y
F081936	Metagenome / Metatranscriptome	114	N
F083963	Metagenome	112	Y
F083986	Metagenome / Metatranscriptome	112	Y
F088429	Metagenome	109	N
F088432	Metagenome / Metatranscriptome	109	N
F089091	Metagenome / Metatranscriptome	109	N
F090014	Metagenome	108	N
F090690	Metagenome / Metatranscriptome	108	Y
F095927	Metagenome / Metatranscriptome	105	Y
F098876	Metagenome	103	N
F099772	Metagenome / Metatranscriptome	103	N
F100581	Metagenome / Metatranscriptome	102	Y
F100610	Metagenome	102	N
F102745	Metagenome	101	Y
F104830	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI26141J51220_1000044	All Organisms → cellular organisms → Archaea	5071	Open in IMG/M
JGI26141J51220_1000263	All Organisms → cellular organisms → Archaea	2781	Open in IMG/M
JGI26141J51220_1000349	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
JGI26141J51220_1000465	All Organisms → cellular organisms → Archaea	2253	Open in IMG/M
JGI26141J51220_1000476	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
JGI26141J51220_1000630	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
JGI26141J51220_1000677	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
JGI26141J51220_1000808	All Organisms → cellular organisms → Archaea	1815	Open in IMG/M
JGI26141J51220_1000813	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
JGI26141J51220_1000831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Candidatus Burkholderia verschuerenii	1800	Open in IMG/M
JGI26141J51220_1000945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1704	Open in IMG/M
JGI26141J51220_1000996	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
JGI26141J51220_1001141	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
JGI26141J51220_1001290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
JGI26141J51220_1001458	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
JGI26141J51220_1001666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
JGI26141J51220_1002082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1217	Open in IMG/M
JGI26141J51220_1002192	All Organisms → cellular organisms → Archaea	1191	Open in IMG/M
JGI26141J51220_1002215	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
JGI26141J51220_1002368	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1151	Open in IMG/M
JGI26141J51220_1002662	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1091	Open in IMG/M
JGI26141J51220_1003195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1009	Open in IMG/M
JGI26141J51220_1004122	Not Available	899	Open in IMG/M
JGI26141J51220_1004278	All Organisms → cellular organisms → Archaea	881	Open in IMG/M
JGI26141J51220_1004381	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
JGI26141J51220_1004393	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
JGI26141J51220_1004981	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
JGI26141J51220_1005249	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
JGI26141J51220_1005292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
JGI26141J51220_1005795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
JGI26141J51220_1006176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
JGI26141J51220_1006233	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
JGI26141J51220_1006329	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
JGI26141J51220_1006370	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
JGI26141J51220_1006600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
JGI26141J51220_1006685	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
JGI26141J51220_1006896	Not Available	721	Open in IMG/M
JGI26141J51220_1007139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
JGI26141J51220_1007446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
JGI26141J51220_1007523	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
JGI26141J51220_1007601	Not Available	694	Open in IMG/M
JGI26141J51220_1007638	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	692	Open in IMG/M
JGI26141J51220_1007987	All Organisms → cellular organisms → Archaea	679	Open in IMG/M
JGI26141J51220_1008812	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
JGI26141J51220_1008839	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
JGI26141J51220_1010987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
JGI26141J51220_1011610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
JGI26141J51220_1011910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
JGI26141J51220_1012272	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
JGI26141J51220_1012304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
JGI26141J51220_1012305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
JGI26141J51220_1012424	Not Available	568	Open in IMG/M
JGI26141J51220_1012920	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
JGI26141J51220_1013111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
JGI26141J51220_1013115	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
JGI26141J51220_1013166	Not Available	555	Open in IMG/M
JGI26141J51220_1013407	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
JGI26141J51220_1013483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
JGI26141J51220_1013699	Not Available	547	Open in IMG/M
JGI26141J51220_1013891	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
JGI26141J51220_1013916	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
JGI26141J51220_1013963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
JGI26141J51220_1014038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
JGI26141J51220_1014410	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
JGI26141J51220_1014538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	534	Open in IMG/M
JGI26141J51220_1015299	Not Available	522	Open in IMG/M
JGI26141J51220_1015675	Not Available	518	Open in IMG/M
JGI26141J51220_1016304	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
JGI26141J51220_1016544	All Organisms → cellular organisms → Archaea	507	Open in IMG/M
JGI26141J51220_1016651	Not Available	505	Open in IMG/M
JGI26141J51220_1016839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI26141J51220_1000044	JGI26141J51220_10000445	F100610	MMPVIISLFGNEDMXIXEFXLTNKSVFYRCSYGECFRFIADKCMHCXANPIPDTEMHINYLRRXPDIKKAVTDLGI*
JGI26141J51220_1000263	JGI26141J51220_10002633	F023903	MVDLMINHEGKKCDXCGDSVDRLVPLNDPTRIGRWWCLKCIYKEGKAKFDADAKNG*
JGI26141J51220_1000349	JGI26141J51220_10003492	F017860	MGPLMTLPPLRLVAEAWADHGGPLRPEGLSPLTVGLLAGALTLAAGVLVVIIVMRLSRKPSSPE*
JGI26141J51220_1000465	JGI26141J51220_10004653	F048397	LEKNKCDKCNLTIHPNFIGNHKCDHQNCPICKNPITPSQYWPHIRSHPGHENDSPPLPKRNMDENRKNENHSGYGNYQRN*
JGI26141J51220_1000476	JGI26141J51220_10004761	F038323	EKEQDMAPTEDVLADYVERLFEKASLLSLAVTDGSIRPDASRLAHLQSLATELEFGLGMVHDRLTERHELA*
JGI26141J51220_1000630	JGI26141J51220_10006302	F090014	MLRLVRLLLVALALPASWWGTALAADAPEAEPAPVSLSRAIPDLHLSVADMPGETTVRLPLASDSYRLYGLLSPYLSLGSSGSPGVSWNSTLPPSLRSDRDGADSDLRLGAGFALPLSSRAQLYGEYRFLRGRLDPGVGRGLLQREPDSADFRAGVSIKLN*
JGI26141J51220_1000677	JGI26141J51220_10006772	F005275	MPRPAPPALNLSGIEAASLVKFAYFTSDAPAPGTLLYTAFRRNMPAGVKEFTVRTAATFFYGIQQTGGLLNIQVRWINPDGVVVRTSNLPMDQSREGALWTWQVDRLEKRDLVLPGVWVVELLISGHRVGRYPLLVRPAVR*
JGI26141J51220_1000808	JGI26141J51220_10008083	F005683	MEKSNGTKIMGILLVFGLVVYSIYFGQISFXEGVELKTVGKGAISCGNGEEVKGVXINFFVSYDEETPFAEWNMDHKELGSAGGMITNVKTSSDSFVLKGFEAFDSICDVETPSDVKLSGNCGEGTVRLVSDNGNKGTFASNVKCG*
JGI26141J51220_1000813	JGI26141J51220_10008131	F006025	VELLLSTHDTGYERPDGPTIAKVLASLDGGRNVVATLGTSDSSYLQATGGVQTGFGLDLQEGSLERRFRTRDRALPLAWVTEVFHRYARGDLAWRDTVEWEQDRIMPARPSWTNSWAAYIVLLVVVAGLI
JGI26141J51220_1000831	JGI26141J51220_10008312	F037262	VYGWDAINPSTRQKAPNQAEYDLTVDWRPAWREPGFLKGMWFRARSAILDQQNAGTLGYQFRLILNWERDLI*
JGI26141J51220_1000945	JGI26141J51220_10009451	F002465	MPTSRPPRPDFSEGMNERRIAEFALEESRLSNVAYRFELRPRPRVWKNWERTEFEPNRYRVIGLAGVCLSREEADDAQKVASRALGDVDDVVYTVERPARAVIVRGASGTSEILNRPTLCAEIIAPDTAAFERALAALDAAFPGGRVAG
JGI26141J51220_1000996	JGI26141J51220_10009963	F100581	LTIGRRELAAAISIPIVFAVLFYTPPLAFNLLVAVVALGALWEFYRLAEKTGLPVAKTVGIVAGA
JGI26141J51220_1001141	JGI26141J51220_10011412	F017546	MDTPVKDGLVLEKLMKRGAAVCVVALGGVAVGLAVWALRRWQDERRYQAWRAAVTADPYRRDRNGYPVGAQLGLSRAR*
JGI26141J51220_1001290	JGI26141J51220_10012901	F032456	MIRAIVLGSVAVLTVGYAWPPDYAEQSRADVATCVSYTRQTSPQFDAQVRDVDLTTGHVDIQRSAADARAEVAFASCLLAVRHWRLIERHLPSPTDPGPI
JGI26141J51220_1001458	JGI26141J51220_10014581	F007181	KQAYTPSKPSDTVNDPEIDGMLSQVMRQTDKDKINTLIRGVYARLRSEHHGVPVVYLHSPYATSKTLGNWNPGSVMYDLFLDVLASGK*
JGI26141J51220_1001566	JGI26141J51220_10015661	F072698	VTLAGCSASPDIRLRNPETGQVFTCSGESGTTGRWWDEMAKRTRDNCVKDLEGRGYVIIK
JGI26141J51220_1001666	JGI26141J51220_10016662	F027059	MARWDSRFSLLVAVSLAVVLGLLLGLAGEAGRPYPGFFAAPDFRVFPVDPAARAAGLQPGDRVVAVDGASPLTLAARVREASGPVGYGIERAGQRSSVAITPRPLTWTRLVDHFGVYFLVSLVMLGVGAAVYVQNPAAAPNRRFLLYMCLWAVSNVAVPEAVLGARTYAAALVGLIAPLLSIHGWIFFLTYPANPDRERWLEQHRVIPRLYRLAVALGLLGAGSFVLIARLAPGLLVDGWIYPASAAVLSLLSALSFPIKVGALLDTKRRAASPLIDQQTTVLLLGIALGLGGWLTLMLWPLQHLYASPVDPQVGSALVLLYPAAIGYATVRYRLFDATVVIRRSVIYT
JGI26141J51220_1002082	JGI26141J51220_10020821	F083986	MPEVPDLTDPRYLDEIGWFLYHEKYRRDRFGGSYDAERVANSRLLRDEVAAYLEQHAGW
JGI26141J51220_1002192	JGI26141J51220_10021922	F023901	VLIPHFKSMKDNCSLKMRSTHNEQGQTCEGGVPLDPKKFGGYEFAINTKGWDAKREPTHNCHDQHKSGLIPTNLENDKAVRLRQTVKDESGKVHQIGEIDYMDGNGFHKVMDIFDSSPNPWMVDRNLYETKSYFWIRNNGSGYITVRDVSLEILS*
JGI26141J51220_1002215	JGI26141J51220_10022151	F040299	RGKAAPRIGRKDQQDPDRGNRTPREGVVDHEPERSDRDAGAGRPVQLDVEDRPESDSPRRTDDTPPAK*
JGI26141J51220_1002368	JGI26141J51220_10023682	F008966	MVTVTAETSSSSSLDDAWAALGRRATYFYFPGVSRSPSGATLDHALDLPIVDRQEQVATLRIDRPSRPSPLEGRGQGEGGHRERRFTLRGELVTISGRWRLEPTDAGVRVRLTLDYDIAGPLKTLAVNTLRSRSPLPIRTDADEILSRAVDEFFETRFAEQAA
JGI26141J51220_1002662	JGI26141J51220_10026621	F090690	AAFSVRRQGNASFVRPLTGHRSQIYSEMTLDDFVRNLNVFQEENLR*
JGI26141J51220_1003195	JGI26141J51220_10031951	F014557	MNGQRSFDRGIARAMTRRQFLARLARASAAATLVSSTLGCGRVRGAIARLGSTEEPIFNSVQEEVVEKIIDGFNPPDTEIRQRLAREDPDYDPVAVYAQYAWASGDEFLASMRFLVDFVNVLPTFTRTFSTRYGLPARLELRRFHPVDANRYFLFLRDSNIRALRNIFSGARFIGTAPIYVNEKVTWKAMNYPGPWVRETDGATADLGRTTSFDM
JGI26141J51220_1003195	JGI26141J51220_10031952	F067960	VGRQMRVLNDDRAARVALRREGLTAATPRGRRFVGDSSAAALGGRLCAACHYDEHRLGLGSVHTVDFCSGCHTGRADHYPDVTPNVPNRCIECHVRAGETVAGQRVNRHQFAVPGAEGAGR*
JGI26141J51220_1004122	JGI26141J51220_10041222	F055515	TYRVASWNGKWVYPVPPTATRSVKTDYGALNTLAVELRDRSIVAYVNGRPVATAELGAEAAGALGLYVDQRGMEVVFSHLRVVELAPL*
JGI26141J51220_1004278	JGI26141J51220_10042781	F013352	LLTNSIDKYFPECLTKNSHFASQFSSPPCLSIAIAGFLFSLMASSTNAQIEVTVDENVSTPISNSTLSEDAEPRPDILYSALNKDTIVGEVLNNFSYPIELVRITATVYDKNGIIVATGDKYVNDYLIKPGSRSGFDIFLDETLPSKSKYALTTSFEKSEDDKPEALQLSVGKNSKSSNTFRVLGEVMNQGKNDANAVKVSAIFYDEKHKVMDTDYVFTNPDIISPNKKAPFEFSFYVDNPEKIKSMAFNVQSDEFSLITDNGQNNTISQQ*
JGI26141J51220_1004381	JGI26141J51220_10043812	F104830	MRKRSRDLPRIGLAVAAAAVILMILPERGLAEEVIRITSYKAKFGRNAEVSKVTDEEITGVYAGMKGLKWVKFYFDPVSGERGSVAVWADRKDLDAYMKSEERQDILAKLRPLIEEDVVSRVYVVHQVGKK*
JGI26141J51220_1004393	JGI26141J51220_10043931	F004749	CVPTAVRSAGAVSVAEERETVYVFNVGSKDVTLIDVANRQVRETRPLGAAVRWLSNEQTYWDGSRIWTYDFPNDQVQAIAIDPKQVAVTKTIAGLGKGPGHSLVVLPDKKKAAVNVAGDNLIAFLDLEHATVDGTLQTGAFP*
JGI26141J51220_1004981	JGI26141J51220_10049812	F012367	VITRRELERWLLREGAVRVKRADGHKHFNLRGHHVVVLGHGPQTLSATSLSLVLKQLEQAGYSREQLRREWA*
JGI26141J51220_1005249	JGI26141J51220_10052491	F012397	EIKNEINVTPPLNWEPSPTNNSTTMIWFQNSTKSIFAIIKAPDDLVFPLFIAGPFMTGYLKYKGVLESADRLTFGHSNYGYRYFLNLSSPSKLLDSSSGLIPKNEFLSKIPEGYDVPFKGMLIITQKHKELYAIIFLNPKEKFDSMLNQIQPTLDSIQFNPIEWLVHYGKLNSN*
JGI26141J51220_1005292	JGI26141J51220_10052922	F046045	RGTSMAMDFEKHYTPEDLRLLEAEGRAKRRVFAGPPDFLSVSQVLRMAGNHVDRMCGRLLRVSWQDQSDKIQSVTVQWESGQPGRDRSESPLTVVEELCIHIYKQRKKINLASERQANRPFVSVAKNL*
JGI26141J51220_1005795	JGI26141J51220_10057952	F015846	MLQSPGGTSVAWSACVERKSFEECKPVNVLVLDETMELSAPVRGLASLNGWQPHFIGSLHEMELAVQAHGRPALTVVNL
JGI26141J51220_1006176	JGI26141J51220_10061761	F083963	MTRRTRLASCAIASIAVVAALGCGGPKTVARDGYRARLAYSTEDQFSIAVRGESTRISGSVDGSEIVKIVRPDVKKVWQFRPSTKKIYENSWESTDEAVPGYPLRPGFDVEAYADRFGATVTRLDDATHGLHPCERWRLALPSGDVATIWVARDLDRLVVRIQHEKKDQGDEYQPFTDTQLLDIKV
JGI26141J51220_1006233	JGI26141J51220_10062332	F054952	MKIMVVMGEYPPEEGERRRQSVLRCASPGTEIGFDVIKATFFRRSNSQVNSLSAGPLVASVAVKAEASGFDAVVPFG
JGI26141J51220_1006329	JGI26141J51220_10063292	F036952	MTFALRILAVIVFVLATVGVAPVPMTPLGLALWCASTLPPGGGRPAARLASGL*
JGI26141J51220_1006370	JGI26141J51220_10063701	F054648	IRRRELGEARGLIDSALASREMTIGSAGVLLEACSTAIARDLSRLRRAARRGSGDEAPLGALMEATRAILESDPASGLAAEPRQQAGRRLWRGHTRLGLRRWRAGDFEAAVETLFGALSVPGPGERRRRLGRDLLVRTLEDAAGQSLELIPELRGDGDRAAAVERAQRVLEHIRRARAAGVPAEDLAVAASRARQLLEHIEQTSVR*
JGI26141J51220_1006600	JGI26141J51220_10066002	F010431	KLHFVRLPANPALEQIYLRTNVGKSQYSWAAADTETYAVPASLMGVDKKEEKYAAQMQKLVLSILNSADDLRASGHPKWKSSIIQTYFPYRGYEPTNQVIEVFNFLDNQGYKITKK*
JGI26141J51220_1006685	JGI26141J51220_10066852	F008809	MKRILGYLKDEQGVETLEWIAVGALIVMLAVAVYPGTLKXGIDAVIXDITXKLTGIVT*
JGI26141J51220_1006896	JGI26141J51220_10068962	F089091	KPLIHLPRFSHTHEVFMYRDLALPLLVVGVMGCTSVQYNEVDCGTLPSDTFWSGNIALQCQEYRRLQAETAYRAEVAQSLRSYRECLSKHEGSLTGAKEQCSVYTQGLRDSPGASPPTK*
JGI26141J51220_1007139	JGI26141J51220_10071391	F057707	VVFRGMPVGEAVWEAYLAKADESAADVLEEAAGGTPVRRLLKTHKGRIDAVVRRASVPSGPAPAAPWSFISKR*
JGI26141J51220_1007446	JGI26141J51220_10074462	F102745	VKRAVLLSLLGSAVLAGFSIAALPFSRGLFRAPRTPYDAGDASFAAPAWILLVRAEPLVPRNAYVLVRSEPVDLNLDTYLHRFAVALLPGRQIVPAARWGVASEPKDLEIAEYE
JGI26141J51220_1007523	JGI26141J51220_10075232	F006926	VSPALARRVRGLRPLAAVVLLAAACGLAGCAPLPPARQVADIGLIEGRWQGQIKFGFGGYQLFYPTIYPDGRLVASWDGVTRYGQVTVGPGPTRFSLYIWSGSLDYLEGGGERVIXMKEDFGSWDAIVRPLK*
JGI26141J51220_1007601	JGI26141J51220_10076011	F058905	TGNGDGQPAERPRRQRMAGVGTGSPGEARRPARPSSRDVAGTLRQLRSRIETLENEQEHLRAELAVLRGEADGYDGAPSIFVTGWFRATLVLIVLAIVVVITVPWLMDVFDGGAREASPPVRTESTASPTR*
JGI26141J51220_1007601	JGI26141J51220_10076012	F009097	SDLSIIARDNPLDTVMLRWLAGVPRFQTDQILAGTYATSDECKAALERHVGTLKAINDSWSSEPFEGGANSGIIHYYRDGLVYARAELRCAEQP*
JGI26141J51220_1007638	JGI26141J51220_10076381	F040514	ARVMAVIAGAIVLVPQDRTLAHDGASDNHQGAHSSAKPATADTEIVVQEGGHPILKGPQTHGQVLTLVAGEPIVLALRNEDHGPREFISPLFTKTEIHFLGRATGIFRKDAAGFRLNPGDTLTLQFTAPFSGFRRMYDLIWCGHDGKPGSELQELLIIMTEEKQPHAASETHGR*
JGI26141J51220_1007987	JGI26141J51220_10079872	F075479	MMVDINSEYARAMIRDFIKIQKDILGLPNLTTKQKDDINSLGHELGALSSQADDDKIKTGLIDMMNRLA*
JGI26141J51220_1008812	JGI26141J51220_10088121	F058471	EQEIAGTGQWHQKFTLFMPGDPETEQPFDRTGIKLDLSDPQVRIDLWKTLKDPRFND*
JGI26141J51220_1008839	JGI26141J51220_10088392	F036766	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMVAAGASLLLALAIWFIGRSVPVGVIYAFWVLGPPLALAW
JGI26141J51220_1010987	JGI26141J51220_10109871	F008438	VTDNAIQSLVTKRVAATLLAPPYVEELEAKGYVKLAEARTYAPLSFIGMVSSTETMKKSPQKVYSMIAALHRTMNYILNPANRTEIIQYVAAYHKIDPLLAEKSFAAQMLGYSKDGTKPRAAVEKEIEIYRESLKIAKTFTPDDLEDMTLLRKVQSR*
JGI26141J51220_1011610	JGI26141J51220_10116102	F009617	LPEAVSLLDGLRSAPAEYFSALSEISALPDGGFGIMDTIFRRPVRVLRRDAPAKIRALLEARGFIESRGWEARAIDLRFADRIVLVGAYGAGNSL*
JGI26141J51220_1011910	JGI26141J51220_10119101	F008142	RYLLTLAWVLWAHEMGMMGDKVVDRGYTAIDSFETRQLCHAAMADYAALRLVRQGAVRIDFSCLPEKTDPRSPVARSVSPAASR*
JGI26141J51220_1012272	JGI26141J51220_10122721	F088429	ETNASLNVPEPQPETNASLNVPEPQPETNASEIVTPRSIDLNITVGKDPIARSENQMVTVVALDPTTGKVLDRVFIKLEIKDPVGILVKNYTGTVGNLTRTFKIGENAIGTFXISATASQAGXQSTKSLPFQVQ*
JGI26141J51220_1012304	JGI26141J51220_10123041	F003529	MAIFESLANSLRVLAVGHRVKVTLRPETGRFPNPMEGRICEKDESGNLSLTSDQGLVQVRAEDILSITRLPG*
JGI26141J51220_1012305	JGI26141J51220_10123052	F022904	AYDFAMEEVTGASSRLADALLARTQERADATTTEQECSNARSVYERMIHLFPRVRLDATQRASLLKELGLLRSRLEGCKAAEGKSQPTRS*
JGI26141J51220_1012424	JGI26141J51220_10124241	F035105	FVIAACGLSFALAASASAECAWVLWSQTHDPKPGAWMLQTAYPNVGDCTKAIDHREKEGRKATYVMEDGRKIKGVTDRRAPTDLFVLYGRDASNGGVVWQCFPETIDPRGAKAR*
JGI26141J51220_1012920	JGI26141J51220_10129201	F081936	LLDRKLDAKKPSPPNVEASVNPKVEQLAHVLEITLIVVPDSADLLNFNXRFLIIYRLKFTKXAIRTELIQVKINASIISLGT*
JGI26141J51220_1013111	JGI26141J51220_10131112	F056735	ENKYAPENVSGWNDPKKDAILDELSSIITPARSEQLQIEFCRMFSSALPHLPLNYSPEVIAVKRGLTGITPRQESGGQNSSSWNMYQWDKT*
JGI26141J51220_1013115	JGI26141J51220_10131151	F020931	VSNKELLEIVEKKKKVLEKDLIDNLEPTRNLVLECLDRLRKNADELEEQEIKAESPQFESLINTSKKILITSIKKESLIESYQIKSYEDAIKFKNNLELLINRFGQVGXSHNRILNEFMRKQINKXKSEFDNLSSLLKEVXKILSTKENQINSCIQCKADLILLDEKMNETRTKEVRLTELIKET
JGI26141J51220_1013166	JGI26141J51220_10131661	F021936	MRQTVDVVGTRRSIASAGSIAMLLALLIAGPVGAQITGRALAPDLRVEWSAEEDRRGRTVVSGYVYNERAGSYATGVRLRVETLDGSGQTVGSTTGYVLGDVPPSNRSYFEVKAPAKAAAYRVTVQSYTWRGYGAGGG*
JGI26141J51220_1013407	JGI26141J51220_10134072	F072449	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVLATPPGDNGDGRGAG
JGI26141J51220_1013483	JGI26141J51220_10134831	F003633	METLMEAADDPVGMPKDEAAFEKEVRSVFQETLGLIHIALVTHYQLSESESLELEKDLYVWFLRFCYRPGTSSVREARPFLLVASCQFAREYQRYMLGTGDRPSDERLRRLLE
JGI26141J51220_1013699	JGI26141J51220_10136991	F072495	GDGNIYSAWAVCVRIRSGTKRTAPAFRGKMLANEVERLKPPQYVAFRTMERWVVIPVIARIESREGGRLYGYWFSRFTPEGAFREVPVDYVVDLGSDDDAEKLVDLIRGGRELPVEFVQRLHVID*
JGI26141J51220_1013891	JGI26141J51220_10138912	F095927	LPVYSAAPEDVAQMTAMGIPSTFIIGPDRTLIDMAVGFSPDVEDRWKRVVEKHLKKK*
JGI26141J51220_1013916	JGI26141J51220_10139161	F024604	SLSQGLVDGIITSAPFTFRLMKDGYRELVGPKEFKKAGVQFLIQGLVARKSFAAKNRDVVIGMIKATMEGTRQIFVNEKHAKAVLAKYTRQNDPEILDRTHKFALDIFVKDPTVTPASIQPIVQQSAEFNVVDAKLASNTPIGAYYDNSYIEEIKKSGFFTQLWK*
JGI26141J51220_1013963	JGI26141J51220_10139631	F088432	LLLSILCIFLGGTLAGAGGRDPREDPRALRAAVASLLATGAVFFLIGIALTAVQKARKPASPLSLAEPVDPSGVAARAPRFGQEER*
JGI26141J51220_1014038	JGI26141J51220_10140381	F002551	MGILNRRPYLVLFVAVLAVAIGVAPALAKGKTFLDSDDAKEANEPAKYLPDYDKLMKGRDADWVYFPEGSLKKYKTVQVKEFTENGKGREARNAAEEGKEYMEQWLERAGYKLAEKDAELVVEGNVFNAWEPGTGARIWGGWMANPGVGVEVLLKDSSGKVVGEVR
JGI26141J51220_1014410	JGI26141J51220_10144101	F098876	FKKEFNQLSKDVIEPVMRKFESYLESKDVNSSVHIQSQIVAGKNPSIEFSLHLKLTHESRYPNIKFSSSGEKISVQEDRLMTKDEVSQDMIPEYYDKELITEEFVKERLIRLIKSCFDKDWQSFYS*
JGI26141J51220_1014538	JGI26141J51220_10145381	F026346	SSLSKVTQLPPTEGGEAASRVASIVVETDKKGRCEERRFDNRTGKMVSANYVNCDARLEPERDTTPSENINRERIRAILGAFKK*
JGI26141J51220_1015299	JGI26141J51220_10152991	F099772	MFRTFGQSFFLLLLTVCAVQLMGTACADDCLRQWSTSPVHAHDQLPGSPDGQTETDPGEGEFEELALAQGEAFRIIHLARACVLDNASCPRTDFAFDWFRPP
JGI26141J51220_1015675	JGI26141J51220_10156751	F077482	WLPHQWYASTLVLPIVILAYPSLRCGEAYELLLDRELSALDQFYAGWGTVIRMDENSEGQGPKDTMQDNEYRPAGGIKKFAEPTIQLRGTAEKIGLDRQSLSSFIGTKFLNEFAFLQSDFVFEKTYQTWEIGIFECETWTVGVNYPIAFHVQCAGGSMDEPREWHYASLGYG
JGI26141J51220_1016304	JGI26141J51220_10163042	F031150	MAEFIIDADGHIMEDHKDIFAHIKGNFSEMNWHSTWPMFDADGWQRGL
JGI26141J51220_1016544	JGI26141J51220_10165442	F042938	MEDLEKELGPLIENFQSLVKDAKSKKLESLREDEDFKKEFNELSKDVIEPVMRKFESYLESKDVNSSVHIQSQIVAGKNPSIEFSLHLKLT
JGI26141J51220_1016651	JGI26141J51220_10166512	F081178	VDARNRQDGDQENWRMTVREQETLLQALDLWRKAVGEMTWEARAEASLALLLVRDEEIESLRGRIQQGEIS*
JGI26141J51220_1016839	JGI26141J51220_10168392	F014324	LVNNLRGGGSYLSLGGKAHENPKLSRDYFASLLLAFAGCTSQTVKMVQPQTGATAECSGSSYGFGPLFSESVVDSCTRLYETRGYVALQRLTPEDRASLEQRGLLPKN*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003503: Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences