Sample 3300003287

3300003287: Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome, Counting Only)

Overview

Basic Information
IMG/M Taxon OID	3300003287 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0053071 \| Gp0061236 \| Ga0006882
Sample Name	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome, Counting Only)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	4637232
Sequencing Scaffolds	47
Novel Protein Genes	49
Associated Families	43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	26
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis → Murinocardiopsis flavida	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Peatlands Soil Microbial Communities From Germany And Austria, That Are Sulfate Reducing
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil → Peatlands Soil Microbial Communities From Germany And Austria, That Are Sulfate Reducing

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → peatland → peat soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Germany: Weissenstadt
Coordinates	Lat. (^o)	50.13	Long. (^o)	11.88	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000396	Metagenome / Metatranscriptome	1185	Y
F001158	Metagenome / Metatranscriptome	763	Y
F001758	Metagenome / Metatranscriptome	640	Y
F001854	Metagenome / Metatranscriptome	626	Y
F001953	Metagenome / Metatranscriptome	612	Y
F002153	Metagenome / Metatranscriptome	589	Y
F003505	Metagenome / Metatranscriptome	482	Y
F005410	Metagenome / Metatranscriptome	401	Y
F007465	Metagenome / Metatranscriptome	350	Y
F010150	Metagenome / Metatranscriptome	307	Y
F010528	Metagenome / Metatranscriptome	302	Y
F010923	Metagenome / Metatranscriptome	297	Y
F012995	Metagenome / Metatranscriptome	275	Y
F015068	Metagenome / Metatranscriptome	257	Y
F017774	Metagenome / Metatranscriptome	238	N
F020652	Metagenome / Metatranscriptome	222	Y
F021676	Metagenome / Metatranscriptome	218	Y
F024045	Metagenome / Metatranscriptome	207	Y
F025455	Metagenome / Metatranscriptome	201	Y
F027406	Metagenome / Metatranscriptome	194	Y
F036576	Metagenome / Metatranscriptome	169	Y
F037099	Metagenome / Metatranscriptome	168	Y
F037359	Metagenome / Metatranscriptome	168	N
F042231	Metagenome / Metatranscriptome	158	Y
F042778	Metatranscriptome	157	Y
F043664	Metagenome / Metatranscriptome	156	Y
F050844	Metagenome / Metatranscriptome	144	Y
F055087	Metagenome / Metatranscriptome	139	Y
F057922	Metagenome / Metatranscriptome	135	N
F057947	Metagenome / Metatranscriptome	135	N
F060503	Metagenome / Metatranscriptome	132	N
F064458	Metagenome / Metatranscriptome	128	N
F065459	Metagenome / Metatranscriptome	127	Y
F067292	Metagenome / Metatranscriptome	125	N
F068527	Metagenome / Metatranscriptome	124	N
F070926	Metagenome / Metatranscriptome	122	N
F074509	Metatranscriptome	119	N
F088037	Metagenome / Metatranscriptome	109	N
F088420	Metatranscriptome	109	N
F096460	Metagenome / Metatranscriptome	104	N
F098815	Metagenome / Metatranscriptome	103	N
F098844	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0006882J48912_100004	Not Available	620	Open in IMG/M
Ga0006882J48912_100031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	538	Open in IMG/M
Ga0006882J48912_100065	Not Available	607	Open in IMG/M
Ga0006882J48912_100067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	592	Open in IMG/M
Ga0006882J48912_100071	Not Available	523	Open in IMG/M
Ga0006882J48912_100080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis → Murinocardiopsis flavida	946	Open in IMG/M
Ga0006882J48912_100118	Not Available	630	Open in IMG/M
Ga0006882J48912_100120	Not Available	612	Open in IMG/M
Ga0006882J48912_100130	Not Available	854	Open in IMG/M
Ga0006882J48912_100149	Not Available	586	Open in IMG/M
Ga0006882J48912_100167	Not Available	601	Open in IMG/M
Ga0006882J48912_100311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
Ga0006882J48912_100333	Not Available	668	Open in IMG/M
Ga0006882J48912_100360	Not Available	590	Open in IMG/M
Ga0006882J48912_100373	Not Available	746	Open in IMG/M
Ga0006882J48912_100426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	690	Open in IMG/M
Ga0006882J48912_100477	Not Available	606	Open in IMG/M
Ga0006882J48912_100488	Not Available	509	Open in IMG/M
Ga0006882J48912_100490	Not Available	588	Open in IMG/M
Ga0006882J48912_100493	Not Available	834	Open in IMG/M
Ga0006882J48912_100503	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
Ga0006882J48912_100513	Not Available	528	Open in IMG/M
Ga0006882J48912_100591	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	2431	Open in IMG/M
Ga0006882J48912_100594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	578	Open in IMG/M
Ga0006882J48912_100800	Not Available	803	Open in IMG/M
Ga0006882J48912_100831	Not Available	610	Open in IMG/M
Ga0006882J48912_100850	Not Available	580	Open in IMG/M
Ga0006882J48912_100883	Not Available	594	Open in IMG/M
Ga0006882J48912_100890	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	641	Open in IMG/M
Ga0006882J48912_100911	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	922	Open in IMG/M
Ga0006882J48912_100974	Not Available	593	Open in IMG/M
Ga0006882J48912_101088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	741	Open in IMG/M
Ga0006882J48912_101125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	708	Open in IMG/M
Ga0006882J48912_101154	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1166	Open in IMG/M
Ga0006882J48912_101338	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
Ga0006882J48912_101342	Not Available	777	Open in IMG/M
Ga0006882J48912_101459	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
Ga0006882J48912_101504	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	604	Open in IMG/M
Ga0006882J48912_102183	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula maiorica	525	Open in IMG/M
Ga0006882J48912_102343	Not Available	784	Open in IMG/M
Ga0006882J48912_102697	Not Available	713	Open in IMG/M
Ga0006882J48912_103095	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
Ga0006882J48912_103336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	686	Open in IMG/M
Ga0006882J48912_103578	Not Available	1093	Open in IMG/M
Ga0006882J48912_103627	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
Ga0006882J48912_103990	Not Available	998	Open in IMG/M
Ga0006882J48912_107788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	613	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0006882J48912_100004	Ga0006882J48912_1000041	F020652	VDQFVPRPACTARTWHPETVREPFAPRCRFYPASDRCSGACPLFSVPVEACLSIRPFALRRRRLTFRSVPTAGSTFLAYIFEAIPKSPLDPFGPVLPPPLRLFVAVRGAFNVRNPLSSPIPELPDCDQAFAPLQDLSIPRARSAQLDSKQRSLPLRVARSSFAPRCARNNFLSLRNGSSFRIRYFPPGSLSFEHLGTKLSATSP
Ga0006882J48912_100031	Ga0006882J48912_1000311	F036576	TGMHGTEHREQKRRTLRLSAPQPLVLPATGSKLSDTPQPDSPVRDRTLVAAFRSPTTAASCEAPIPGSTFPTCCFASSPVEFPARSAFLLHSLSRFAPVQAASLLLARCSSFDWLHRLRFQLPLPFGTVASLRIEAFNWIRRRSARLPDSPDSLSLPASFPFYSFGYGSSFQVRYRSP
Ga0006882J48912_100065	Ga0006882J48912_1000651	F098815	SKPIEQLALPAGMRGQSLACSVAETLPSCSPLRLLSRLGSVRQSPFAFLPARSHRLGTAFSSPATTVLFREPPWRGQRSWPIPSALIPNSFSSPFGLGLPPSATFFTSPGAFRAQNPLPYSKLETLKRPSNFRSPSGLSSLGIEALGQRLSLRSLPLCPARFPFAPR
Ga0006882J48912_100067	Ga0006882J48912_1000671	F042778	SK*SSDQPNPPPACTVLSYATRSAGRFACLLPANRFCRSTDQSFQTRRSLVSRSGPDARADLSLTCNDRRFRGSHSRVKAPGLSLRISTSRFPCPFGLSARLPDPVRPGLRPLHCFWPVAASPANHTYVSSSLHSPSGLLPPSGSKRSTGLAVRRPAFRTRPIPFAPHSRCLSLVSRLRIIVPGPLRFRRLAVPQT
Ga0006882J48912_100071	Ga0006882J48912_1000711	F098815	PPSATCGSK*PIEQLALPTGMRGQSLACSVAEALPSCSPQRPLARHGSVRQSSLALLPARSHRLGTAFRSPATTVLFREPPWRGQRSWPIPSALVLNLSSSPFGLELPPSTAFFTPLGAFRAQNPLPSSKPRTLKRPSNFRSPSGLSSLRIEALGQRLSLRSLPLCPARFPFAP
Ga0006882J48912_100080	Ga0006882J48912_1000802	F043664	LLDLLSELPLRGPPRDLRLGSGLTANRINLPYASELYLAFNISSLFSSTSALL*
Ga0006882J48912_100100	Ga0006882J48912_1001001	F070926	VVPSDPLNSSLSSRHARPEHGMRENCGAFSSAPRIGFWPMRINAREMTRSFSARSSDLGTAFYSPAATVPFRRPPRQDRRSWPIPSIQLRTLPQARSVWNSLPLPHSAVRGRSALPTRCPIPDSKFPDVHRLPLPFGIFQSLRIKALCRRQSLGKLTLADSPIFLRSPTAQLSLIVLAAGSSFRIRYRPPGSLLSEP
Ga0006882J48912_100118	Ga0006882J48912_1001181	F005410	ED*NYSGAKKWFQVTYPTIQLPSGMHGRSCAIRVIVRLGPSLPATEFRPSRINAPDRASQLTPVRNPSLGTTFRSLETTARYRATFPRSKLLAYPFGSTLRSRRTRSITPLLHAVRLAPNSANSTRATRCPVPSKRPRLFSNSPLPLGVFTPLPIKAFKLTTSREAHRIETPDLPRSPLRPVFNSSAADQCSGLVTSRSAYCLTNLLEP
Ga0006882J48912_100120	Ga0006882J48912_1001201	F015068	FEEQQASEDVADLERSAAETLVIGTSDRSWQIETGGGERKEIGRSRKAGRKTANPAERFDPEGGKSPKGEWRLEARSSSKPWRLQRARSIEAAQTGANRTG
Ga0006882J48912_100130	Ga0006882J48912_1001301	F001758	VTGERLGQAGWLSPSQAGSQGPGAEAGFTSSSGGVRALSVNAKKGLNGEER*
Ga0006882J48912_100149	Ga0006882J48912_1001491	F065459	EVHGTVNRVNGSEPGTLIRWQTIKRDAGGERREIGPGTKVNLKPGEWVEHFDLEGPKNPEGEWRFKNRVKLLN*
Ga0006882J48912_100167	Ga0006882J48912_1001671	F064458	ARPVANSPARIGVVSISSTGCVPPACAGCFALPIDRWRPLSTRVERSFLRQGR*STSDSHRRRPLARLAQPPAFAGCCSCPPAGYASDFHRRFHLPASPAVNHSTFAERSLLRLSLRCTPCFHRTLHRQLTPTMSIRFPPALASSGILQLNNFRLASAFVSSGASSDPSAALTAGFTLCPGWRPSSGSHRLFPSPTSLVF
Ga0006882J48912_100311	Ga0006882J48912_1003112	F012995	VIAVIRGKQNAESQLKKFEDSQDSSDRHEGWRYFIEKTDLKAGTDPAEATQHRQAELEGRESKALRETETPTFPSPHRQR*
Ga0006882J48912_100333	Ga0006882J48912_1003331	F068527	LDDQVVQPAVASPGYPSGEPAAFAAVPSSGCADALLSACAYLPALRLDRRPTSPARIGVFSPGSTGGKHPARTVCYALPADWLPTSQLALVSSLQLGLRLLPTHIWRRPSARLARTTFGSRRRLLQLPACAFRCCNSPACAGCCPHLPNRW*
Ga0006882J48912_100360	Ga0006882J48912_1003601	F000396	VPSDPISQLNSPPACNGTELCIQVRRVPSLRLPAALFQTQRINASGLTCQLSWLEPASRSGLSLSRNDCPFPGHHSEVEAPDLLLRRPAVHSPCPFGFRFPHAPRFAPARASSPPKSRCPTPVRHSRPFLGSPLPFGAFRTLKDQSVQPDSWPLSSPSERSRLPITPRRRFYFISADTRSPLQAR*
Ga0006882J48912_100373	Ga0006882J48912_1003731	F025455	LHSSGHRGKGGSTRAQSSGVNWGTSGFPPQADFLGCSSLRREFISGGEGFRVSDEAVVSDDPSGQHNPVASQGPLDGRVGVAGSRATLNRKALERVIPSGITYSWERELRWRIRRSHGAYVDGT*
Ga0006882J48912_100426	Ga0006882J48912_1004262	F021676	MPDGPATRPTTPLAVENGVGKPAAPEKGAPNAGLGKRARRTPIP
Ga0006882J48912_100477	Ga0006882J48912_1004772	F067292	ESVVQPVLRPSAPPAAGPQLSQATASSGCAGFELPTCVGCSTSGSTVGQPSGSDRCSVLRLDRWQAFGFHRLLCASVRPAADLPTCVGVLPPARPATNCRLTPGADPSARLVPNLRLSPAVVAAFSLRLLLLRLLQLALAVARLPYRRRTSDSHRLLRPPALPVSTHPTCVGCFYLRLGL
Ga0006882J48912_100488	Ga0006882J48912_1004881	F010923	AGSERKSGGFVRWTGRRQTRLNALIPRGAKVPEGSGDCGRGRPNRVAEVQRATGNEAAATGANRGAVAEPKGRTGAETYWEGSEVAGWEL*
Ga0006882J48912_100490	Ga0006882J48912_1004901	F057922	VPSDPSSSPFSDRYTRSELSTQCSDAVLLLPAAAFARPRISAPEPICVFYLLEARVSKQTFARPHRLLPFESHRGEVNAPALSLRRNSELFFQPVRPTPILGCVLTPPGYVRRPKPVAVFQAQSSQTSIQLPLPFRTFILPDRSAQSVARSEKLTFVYGPFSLRSPQASIIFNNYPLTDHRSRFATVYQAFCSL
Ga0006882J48912_100493	Ga0006882J48912_1004931	F074509	SGVSILITHSTAGCCILRLPQRLTSSFRWRHILWLRRLENLRLAPTALQSGSTGGQLSRLGSAFHRSARPVANLRFASAVARFRSTGGDPSDLRRTILPPARPATNFRLAPGVDPSARLVSSLRLSPAAVATCQLALTAAATSSLRLLSPVCHTGGEPPTRIGCSSSSFTGFDSPDLRRMFLPPAGPLMHPLLQPNLASPAEPSMSIPYPPVRAPSGSAS*
Ga0006882J48912_100503	Ga0006882J48912_1005032	F007465	MPSTESKTKPSSSEATDPSTMMASFWTQWLEQSSRGTQALLEAMQTVGDPQQIQRRWLDAVSQSLDDFMRTPTFLELLGNNLKTITDLKGMQDEVIQDTARHFGLPLAADITGLFERLHSTEQNILNRLQAIEERLKGIETKH*
Ga0006882J48912_100513	Ga0006882J48912_1005131	F060503	GPKGFTSTTMAHRRHARPEPRQSGQRDVICFAPRTPLSNGVRIGATQPICTPFPIGTDISKRPFTRSQRKPASRPPFRGHCSRPTCSISTGPSPNPLQSDVPDRLSGLHSPSGVFMPLRIVAFSRSGAPEAHLLKLPDFPSLPAAITHKCVGCGSTFRVRYFSPGSLLP*
Ga0006882J48912_100591	Ga0006882J48912_1005911	F037099	IQRRWLDAVSRSLDDFMRTPTFLELLGNNLKAITDLKGLQDQVVQDTARQFGLPLAADITGLFERLHSTEQNILNRLQAIEDRLKAIETKH*
Ga0006882J48912_100594	Ga0006882J48912_1005941	F055087	MTKPAIEAQEQYVHNTQEMTKRLAAAQERNLKYTQSIFESTIALLKSHMEDTRFLVEQWGPQGSSQTSESYMNLFSAPFTAYQQMLKGVETASKQMFEGVETASKQSFESFRKATESLEQANHSK*
Ga0006882J48912_100800	Ga0006882J48912_1008001	F088420	MRKNKLRFSCSTAQASFKVTLQNILDCMLVATTAMAGVQLWQAIRLRSVEAWAPSSGANTTNPAGATPNTVSVVFTGTAGGNFDTNNTIFTDTSMSVEPAHIYAPVPNYGESTMWXYAGTGSTAFTLSCPVGTVIDVVFDGCNAYAGSIAAPVATTGALVGATAGNIYLRGLDGTPIAATQLPPVAPAVMVQ*
Ga0006882J48912_100831	Ga0006882J48912_1008311	F088037	VPQSATCVAVLFGADISKGLSLAPGGFLLPSCRWKVNAPGYFLQRPAEASIKPVRLTASPLSSVCPVLGGIIAISPLPDFVPAFLAATRSPLPSGDFYVPLRIAAFDSACRSKAHLFELPDFPSLPAGHSLLNDQPPDHRSRIATSHQVRLFREPLGTKSG
Ga0006882J48912_100850	Ga0006882J48912_1008501	F027406	SKSEAQPVHRRHTRHTSQLEAPDASPLGSPTAGFPGSRISALRLAAAFFHSGPVTRNGLSLARNGSRFHGLHSGVDSPGLLLHYLARRFPRPFGPDLRNRSRFAPVPAASPIRARCAFHGSRA*LRFPLPLPFGILRSLRIKAFRETRRPPARLPIRPISVRSPQPVLFLVSASDHRFRPATFRRLAVPQ
Ga0006882J48912_100883	Ga0006882J48912_1008831	F098815	SKPIKQPALPTGMHGQSLACRLAGTLPSCSPLRLLSRLGSVRQSASAFLPARSLRLETAFSSPATTVLFREPPRRGQRSWPIPSAEFWTPHRSPFGLELPPSAAFFTPPGAFNAQSPLPSSKPKTLKRPSNFRSPSGLSSLRIEALSQRLSLRSLPWRPARFPFAPRKRQSLLITTRSRIIVPDSLPFTRLTALT
Ga0006882J48912_100890	Ga0006882J48912_1008901	F057947	ARALAVCCNRRERSLSFARAEGSYLVASIRCAIGWGMNRSREGTEHHEPPSSLMNLALPWIFPRRAGRCRMTTATKTRSKKTRKTQVRVPLSSDHIREPESSQTSLPLAQVSREQEPLENAARRQEAPEAWQTRRSEAPDAGRGKECSEHDTFTRGRSMS*
Ga0006882J48912_100911	Ga0006882J48912_1009111	F007465	MPSTESKTKPDSSEAADPSTLIASFWTQWLEQSTRGTQALLEAMQGAGDPQLLHRRWLDAVSRSLDDFMRTPTFLQLLGNNLKAVTDMKGMQDQVIQDTARQFGLPLAADITGLFERLHSTEQNIINRLQAIEERLKAIETKH*
Ga0006882J48912_100974	Ga0006882J48912_1009741	F020652	MRPFALRQRRSIFRSATATGSTLPTCIFDAIPKSPPGPFGSALPPSVRLFVAARGTIHARNPLPSPISEFLVCDQAFTPLQDLSIPRAHSAQLDSRRRSLPLRVARFSFAPRCARNNHLFTSASDHRSGPATSRQAHCP
Ga0006882J48912_101088	Ga0006882J48912_1010882	F001158	MAPLSVVLYQNDPRTAQTLAVSLSQHFDSVHLAGTYQEVSPAVARHRAGVVVLDLEISGSGEVERLHQEFPGLCIVGTHRLADDKLWAEAMSLGASDICEPRNDDVVQSVLRGLTRCAAA
Ga0006882J48912_101125	Ga0006882J48912_1011251	F096460	MKNTVTRVLVLLAVLVAFGASNLSAAVTPCPASSTLDVLISSFNTLANACSSQDKIFWGFTYTPGPNASAATAVQASLIFQQLAGVDIHGWNFGSNWSQAGVGGALANFTLSFQIEVCPSGDPCAGAVIPGTIINLADAVYAPSSVFTPGPETVTWSNGATVTLTNGSPGPLPPGGNIGLGAGTLGPITVTDNFSGMGDITQTTDRFYETVPPTTPEPATLGLLLSGLG
Ga0006882J48912_101154	Ga0006882J48912_1011541	F003505	MSSDKSSEGRISAADPARDFLEFWTNYFEQTAIQTRILLEGMQGGKSLDHKSLDQLHTQGLESLTQCLDGFMRTPAFLEVLKQSLKRMIDLKQMQDQMSQSVAQQTGLPLAADVTGVFERVHSAEQTILKQLAKLDDRLKAIEKTLNSSPAEKNPKRKRATTKEDIGDDAPNDPAD*
Ga0006882J48912_101338	Ga0006882J48912_1013381	F017774	KKWGETVTDMLNKHRESLDAQYKAGIRTIEEAFKVGEAKDPQQFRRLTEELWKHSLECLKTVAEAQTRDVQAAMQKFYEVASKSASGLKV*
Ga0006882J48912_101342	Ga0006882J48912_1013421	F001953	MKKLGLLLLPILAITLMLGGNAFAQYPPPVGDGSVYFVTYYSNANTSGAPDGTLRVINDGSEATQAPEGVENGTLWAAIYVFDDSQEMRSCCACVITSDGLLSESVNKELTSNEFTGRGEMTRGVIKVISSSTWDPTAPWPSTGLRGWMTHIQATSTTLAAGKQAVEKGPFFVTETALADSNLSWTEQSNLGTLCSYGLTIGSGYGLCPCTVEDYDF*
Ga0006882J48912_101459	Ga0006882J48912_1014592	F050844	MLTTIMKSIFMLVLLLVLLRPTPASFYVWLGLAVCVPAIWVVQARRNKYLRKAAYMPASPKIKYEN*
Ga0006882J48912_101504	Ga0006882J48912_1015041	F010528	MQQEMYRQWMNGWPVKWPDVTKADVTKAVDRGVVKDQICSYQKKWSQTLAETMEKHREALNQQYKSGIDTIASTFRMTEARTPEEYWRLTQEFWRKSIDFYKTTFEAQSKYVEGLAQMWLEMVTRGKV*
Ga0006882J48912_101560	Ga0006882J48912_1015603	F000203	MGVRHALFPALALGTPQGGVASFPTLFSTASGVIGLVAGPASALRRLAFE*
Ga0006882J48912_102183	Ga0006882J48912_1021831	F010528	MFEQIFDEYRKAVDSSFKMQQELYRQWMNGWPVKPPDVEKAVDRGAFQDQIRSHQKKWSQTLAESMEKHRESLNKQYKSGIDAIASAYRTTEAHTPEEYWRLTQEFWRKSIDSYKTTFEAQSKYVEGLAQMW
Ga0006882J48912_102343	Ga0006882J48912_1023432	F010150	MRMSFKAYVWVLALVVAAGVMGGTVRAVASPAMNGAGQDQDYSKNKNYQQGLREGKDDQAHKRDHYKKHHFKKDEDQKAYEAGYQRGHGGDHPDNQH*
Ga0006882J48912_102697	Ga0006882J48912_1026971	F002153	SLLDGSLDPTPLEVKNSGGTIVNKMLRNCLFSMVLALLVVSVAAAQDNFVKGGVAGVSGLHGQPVLPPAAIFSNCGTNCTSYNTGSGYYVAGTGQSADGPGQTLAMGFSATKATKFTFALSANTNYTGVKGKISAYLLKGSSSTGPTTKLAPLVQNGAIPDYPTIKVVKYTLKKGAPAVTFKKGLTYFLCETEPGGTVVMLWMLSNSDVTSPFWFQDSNSCTAKGLTWLNATGAVDG
Ga0006882J48912_103095	Ga0006882J48912_1030951	F042231	QCGKTEVKTEIIMSRPLKSFADLSLKVVAVRTAGDSDFGFEFPASGPRSPPSALTAPLEQPAERRRDPLAEYPGWYHGGINDS*
Ga0006882J48912_103336	Ga0006882J48912_1033361	F050844	IMKWIFMLVLLLVLLWPTHDSYYLWLGLAVCVPAIWVVQARRSKYLRKVAYVSVSSKVKYEN*
Ga0006882J48912_103578	Ga0006882J48912_1035781	F037359	MGSVDETIKASLARINAGLQSVGSPNVFEQYQHGVYLNQPFGRSEHAHQVAYALGEGQGYARVEQDKGPDQNDQFWVRLLKPNEITDDMLPIATGVMDQMRRLEHDVHQKPEPAEPRSEDIPTPTPTGEVVSTASLKVVELREKSAQLPGYAYAGGQQLNTIFEVGDGGGAKAVAIKGIRSQRDAMLELHSDGHVAIHVDAADALGGIRDYTRYLTTRDDRDLSQAGGPLVVEFTKEELANVASISTVDAGQFGRRTVITYNDNRSLNVMAGDVRIALKTGDDEITIPVSASGETLSTLRANHPE*
Ga0006882J48912_103627	Ga0006882J48912_1036272	F024045	MNRTEFMEMHANGVTALGEYFVEAQRTAAMLAECTQEPLSFKERFKLMSQGIVEHDAQLTYLGIKGRLYEAARLGYGFSN*
Ga0006882J48912_103990	Ga0006882J48912_1039901	F001854	VVALSQDAPTQAATTPTDIGARLTTIMGTVQEAGETLRFVTEQRAWRVDNPETLKGHEGHYVRAAAYLYPERNLIHIIEVKIPTPRETREADIK*
Ga0006882J48912_107788	Ga0006882J48912_1077881	F098844	QKLCGNLTSQAEEVRALSTKMAAAAGEPLKEQVKRGVDELRKAN*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003287: Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome, Counting Only)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences