Sample 3300003099

3300003099: Fresh water viral communities from Lake Needwood, Maryland, USA - June 2007

Overview

Basic Information
IMG/M Taxon OID	3300003099 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063260 \| Gp0097865 \| Ga0052239
Sample Name	Fresh water viral communities from Lake Needwood, Maryland, USA - June 2007
Sequencing Status	Permanent Draft
Sequencing Center	J. Craig Venter Institute (JCVI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	2568096
Sequencing Scaffolds	45
Novel Protein Genes	61
Associated Families	59

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16
Not Available	21
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → Planctomyces bekefii	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Fresh Water Viral Communities From Lake Needwood, Md
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Fresh Water → Fresh Water Viral Communities From Lake Needwood, Md

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → freshwater lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Lake Needwood, Maryland, USA
Coordinates	Lat. (^o)	39.121	Long. (^o)	-77.129	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000141	Metagenome / Metatranscriptome	1941	Y
F000821	Metagenome / Metatranscriptome	876	Y
F001129	Metagenome / Metatranscriptome	768	Y
F002036	Metagenome / Metatranscriptome	600	Y
F003153	Metagenome / Metatranscriptome	504	Y
F003212	Metagenome / Metatranscriptome	500	Y
F003456	Metagenome / Metatranscriptome	485	Y
F003660	Metagenome / Metatranscriptome	474	Y
F003748	Metagenome / Metatranscriptome	470	Y
F004786	Metagenome / Metatranscriptome	423	Y
F005024	Metagenome / Metatranscriptome	414	Y
F005480	Metagenome / Metatranscriptome	399	Y
F005585	Metagenome / Metatranscriptome	395	Y
F006107	Metagenome / Metatranscriptome	381	N
F006139	Metagenome / Metatranscriptome	380	Y
F006262	Metagenome / Metatranscriptome	377	Y
F006982	Metagenome / Metatranscriptome	360	Y
F009126	Metagenome / Metatranscriptome	322	N
F009147	Metagenome / Metatranscriptome	322	N
F009398	Metagenome / Metatranscriptome	318	N
F009524	Metagenome / Metatranscriptome	316	Y
F009888	Metagenome / Metatranscriptome	311	N
F010464	Metagenome / Metatranscriptome	303	N
F010611	Metagenome / Metatranscriptome	301	N
F010758	Metagenome / Metatranscriptome	299	N
F011387	Metagenome / Metatranscriptome	291	Y
F011484	Metagenome	290	Y
F012570	Metagenome	279	Y
F012773	Metagenome / Metatranscriptome	277	Y
F013890	Metagenome	267	Y
F015329	Metagenome / Metatranscriptome	255	Y
F017972	Metagenome	237	Y
F018135	Metagenome	236	Y
F018171	Metagenome / Metatranscriptome	236	Y
F018914	Metagenome	232	N
F019118	Metagenome / Metatranscriptome	231	N
F020681	Metagenome / Metatranscriptome	222	Y
F024063	Metagenome	207	N
F028151	Metagenome	192	Y
F031490	Metagenome / Metatranscriptome	182	Y
F033015	Metagenome	178	Y
F036592	Metagenome	169	Y
F036677	Metagenome	169	N
F038227	Metagenome / Metatranscriptome	166	N
F044983	Metagenome	153	Y
F048273	Metagenome	148	N
F048933	Metagenome / Metatranscriptome	147	Y
F056187	Metagenome / Metatranscriptome	138	N
F059896	Metagenome	133	Y
F061657	Metagenome	131	Y
F068576	Metagenome	124	N
F081066	Metagenome / Metatranscriptome	114	N
F082341	Metagenome	113	Y
F085348	Metagenome	111	Y
F093778	Metagenome	106	Y
F095133	Metagenome	105	Y
F095420	Metagenome	105	Y
F097213	Metagenome	104	N
F101019	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0052239_100025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	718	Open in IMG/M
Ga0052239_100082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	650	Open in IMG/M
Ga0052239_100089	Not Available	1171	Open in IMG/M
Ga0052239_100335	Not Available	598	Open in IMG/M
Ga0052239_100419	Not Available	2410	Open in IMG/M
Ga0052239_100597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1038	Open in IMG/M
Ga0052239_100643	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	839	Open in IMG/M
Ga0052239_100656	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → Planctomyces bekefii	652	Open in IMG/M
Ga0052239_100822	Not Available	1176	Open in IMG/M
Ga0052239_100828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	669	Open in IMG/M
Ga0052239_100858	Not Available	705	Open in IMG/M
Ga0052239_101470	Not Available	515	Open in IMG/M
Ga0052239_101532	Not Available	616	Open in IMG/M
Ga0052239_102175	Not Available	910	Open in IMG/M
Ga0052239_102540	Not Available	550	Open in IMG/M
Ga0052239_103015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	918	Open in IMG/M
Ga0052239_103072	Not Available	531	Open in IMG/M
Ga0052239_103209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1127	Open in IMG/M
Ga0052239_104288	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723	Open in IMG/M
Ga0052239_104555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1845	Open in IMG/M
Ga0052239_104636	All Organisms → Viruses → Predicted Viral	2929	Open in IMG/M
Ga0052239_106148	Not Available	604	Open in IMG/M
Ga0052239_106317	Not Available	714	Open in IMG/M
Ga0052239_108644	Not Available	709	Open in IMG/M
Ga0052239_108816	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
Ga0052239_109135	Not Available	745	Open in IMG/M
Ga0052239_109137	Not Available	578	Open in IMG/M
Ga0052239_109203	Not Available	692	Open in IMG/M
Ga0052239_109266	Not Available	1411	Open in IMG/M
Ga0052239_109272	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
Ga0052239_109306	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	942	Open in IMG/M
Ga0052239_109499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1469	Open in IMG/M
Ga0052239_109506	Not Available	1060	Open in IMG/M
Ga0052239_109557	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2273	Open in IMG/M
Ga0052239_109564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1162	Open in IMG/M
Ga0052239_109711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1059	Open in IMG/M
Ga0052239_109742	All Organisms → Viruses → Predicted Viral	1585	Open in IMG/M
Ga0052239_109790	Not Available	782	Open in IMG/M
Ga0052239_109811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617	Open in IMG/M
Ga0052239_109814	Not Available	609	Open in IMG/M
Ga0052239_109886	All Organisms → Viruses → Predicted Viral	1657	Open in IMG/M
Ga0052239_110014	Not Available	815	Open in IMG/M
Ga0052239_110017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	621	Open in IMG/M
Ga0052239_110078	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	581	Open in IMG/M
Ga0052239_110089	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1427	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0052239_100025	Ga0052239_1000251	F061657	MAAPFTLIVAGVTGAGAGGDLLTFPAPSATTTPYVDLGSLSLTLSGDGGGGSMTFDVIETKTPSGTTPWWRSGGVYDNARVQFFDSRYSATTPLFLGYISGIDAVMLENGVGTRATVSVEDADGWLSKTIIRNGTTGIRATSFVDSFTLGSSTSTDRDIINGLLARVHTLVNDATTRQILNTAVISGSTRAIYTGS
Ga0052239_100082	Ga0052239_1000822	F044983	MSDEVWASIERKIKGHYLAAQNLPSACPECANILEPVDFGVDPQTNERLWVTHCCGKWDKYLEVLGPADLI*
Ga0052239_100089	Ga0052239_1000892	F095420	MTPKIGPSTIAMLTGAVVVMVAFIDTWAEGSPNLWLAAISAGLTAMLGVLRSWQAVASEKGDKQ*
Ga0052239_100335	Ga0052239_1003351	F009888	MAVIFDLTEDPQQVVQVSAWVGDWHSYVVRLVDELGSPVDITTGTLGITFTNIATGAAYTFASGSVTLTKQYSAQGILSILNPAAYGTAANIRVTVSFTVGTDVRRFGPLEIEVLAP*
Ga0052239_100419	Ga0052239_1004192	F018171	MALYDAAGNLVVTGYVAPDVESYDITHEADTEEVRNSSGEVVGHIGYNNRLTLTLNFIPSGASTANALLAASLPDVNGTCVITGAPIIEIGGYPDAINAATGNRWIYAGGGSIKTTQTGKATGTITLKRYTNLTASGAATNL*
Ga0052239_100419	Ga0052239_1004193	F006107	MNGVAPRAEKALVDYLASGDWSGAGAGTPSFLTSYSRGLYDDPDEQDTMPNFPRVVVSSTAARPIQRTDLTCEVDIEIELQLSADDTDEADVLTTVAALDSLILPLFDENGASVLDAGISSESGPFTAQFATPSDFGASSISNRSRTFTRSITLFCSATL*
Ga0052239_100419	Ga0052239_1004195	F005024	MRPVVNMTVDTSRFDAAMKAYLLQTSRDLHKAVNSRFFFLMVRLFVLVPPKSPQAERTRIGDYLSKPLGDINRISKKTGKRIGKSRLLRRVHLIAQARERKAGRRGLYGVEMKQAASRVYRKAIGSVGYLRSGVVKAIRIFNRGFSQFKAPKWKPLVKPPGYKPPAKPNSALVALANQYGLPEENVAVHKGTKARGFQAVPGWNPTASVVMSTGIADNXSAESSASCRAPCRRPTTTSLRN*
Ga0052239_100419	Ga0052239_1004196	F009398	QPDPCFGRLLHLLMTTIGSSLQQGMTVLQQMLGAPMFIWEGSSIRCIPAAITDANTPVAGGFQDNVTSRILVMFSDWKTCDSTLVSMDSTLYTLDQGTTFSRLQREDSGFVLLENTDRIALTFCKPRPVVGRTLVYQGRTLRILSCRVDASGAYYSLDLGAKTK*
Ga0052239_100470	Ga0052239_1004701	F003456	VTVIAGETYILELKNRATLSLPEFWREAQVEALNYAKARGLGEVPLSYVVVKRRNASIDQAWVIQDLTQWLKEKQ*
Ga0052239_100597	Ga0052239_1005971	F097213	MISNLLEVVGGALVIAGLALLSLPLGLIALGAALAAIGYTLGDRK*
Ga0052239_100643	Ga0052239_1006432	F036677	DISAEREMMRAGVVVEGQFDSNYDQLRLGFLKGSNPTAFKRLASFATLNAARTLQKPMRDKAPKGQTGKLRKKVLARKARFNNPAAVVGIKGGRNGVFYGWLVVGGTGNRRTTVNGTFAVKPVQKRPFVDEVVKQRSNIDRAVESYSKTVAAFFNDEPFRNTILKFKRGNQR*
Ga0052239_100656	Ga0052239_1006561	F048933	GAYREFNGYFTVAITNADITERKVIPSGLATLSGASTYVGNAAVESAVLAVSVEVFQSRIAPGGQIEGVDFTTVSPYRLGRSLFNRVSGLLGPFIDTDSMVQ*
Ga0052239_100822	Ga0052239_1008221	F009147	STEYSMGREGFALVTATTAQTGNYSALIPTEPTVFTSITGYQISGTWTSKTIPAGFPLVGNITGFQISSGSVVAFLARS*
Ga0052239_100822	Ga0052239_1008222	F038227	MIANGIALNRLFPGQAGGTDLPVLRRDLLQEDEFFVLQEDGTGKIVITFGTFDSLLREDAGFLFREDDGKLQIQSN*
Ga0052239_100828	Ga0052239_1008281	F005585	MAIRDTVYYAFTKSRDNSVFSSETQLTLHSFLSRQNSAEWWKVQSARIRISISLDTPLSWLSPDFRHQKLGMTLSLTRNSNNHQWCDYCKSRWGQLKDGTWHLKAQVPAVWKVVSETPNRRGQVRFYCQSCANEAQNWPDGTFWSLKEQLTYAIDQFAGREKLDVELP*
Ga0052239_100828	Ga0052239_1008282	F056187	MSNYLDDYVSVQDRLKEFIGDHPDYRIKTHVLEESLTPNCDVYIVKTELYRTE
Ga0052239_100858	Ga0052239_1008582	F009524	MTDLTILDAIAARLTALTPPTGYALRKAYATPPESLPVVPAAILFPGDDSITVGNGNRTTVLTVAIRVYLLPIPRMDEKYRDLYTWRAWLRTAFDGAVTISGNAVQVAVTATTLGTDTYADQEYLTVEATAEVTVYDTVAFTA*
Ga0052239_101470	Ga0052239_1014701	F011387	MAAKAITAKDYFTNLVEYTGTALTAVDDWMEVPAQSPSYTFAVTVTGGANFQLALECSFNGNGNWFTIDNGKTINSNGQYVYFYDGKPAAKIRVRISSISSGTPSVVPHIAVAYHG*
Ga0052239_101532	Ga0052239_1015322	F059896	MARVTVSGYLMPRYLCAFHASELCESIGDTAGAVKFAQLIAGDKVSA*
Ga0052239_102175	Ga0052239_1021751	F010464	MSAGGVVAWFTKGRFESESLQVKQAQAVLAMWQATAEAQNKELVELRNEVVSLRQRLEEMEHTIHELQSENAQLKNLS*
Ga0052239_102540	Ga0052239_1025402	F003212	MKDRYLVTLEIETYDGDPREWDWEKLSTGEDVIKIIETQFKGRVLPGEGEGNE*
Ga0052239_102540	Ga0052239_1025403	F000821	MNKEYLEAKFDLCINQAEKNIQEEEIALAIANLRRANSALSQLFGFEEGGDI
Ga0052239_103015	Ga0052239_1030151	F036592	ATETWANASNIGLGEIDPGEYTMSSRQLTDAVISSVANQIASSALGYFYEDANGLISYADASHRQDYLTANGYTDLDAGTAIGPGIGIVQRQGDLVNKVVIDYGNNFGSQYTAQDAESQAIYGLYAEQFSSYVKSASDVEDMADRLIQLRAFPSYQFQSITFPLQSPEIDDTDRDALXTSLWVCQCESPTYRLKCLAANLLAMSKAGRLGRQWEGLA*
Ga0052239_103015	Ga0052239_1030152	F005480	MATTTNYGWETPDDTDLVKDGALAMRTLGNSIDTSLAELRGGTTG
Ga0052239_103072	Ga0052239_1030721	F048273	MTPRQIDGLIERLDSHSQKLDEVRSDVDRIKGGLVVIGALLFSVLIPLLASLLSK*
Ga0052239_103072	Ga0052239_1030722	F093778	MDAELQALDAAMAAAAVHGWQIILLDQIEGVWTAIASDKIDGDPLLTGTGATRTDALLALTAALESR*
Ga0052239_103209	Ga0052239_1032092	F006139	MAVEIVVALIGGCFLVLVALIGKIGSDNKKDHGKVHQVLGRIEQKIDHHVENHQ*
Ga0052239_104288	Ga0052239_1042882	F012570	MQTIIVDGTTYKVKFDRDPIELAKAARKPYRPKKPKDIRKFPLWTESVSTAEYIRRFDVLNFLQAVQYAGASAETAAQYDPTIPLCEVFNDD*
Ga0052239_104288	Ga0052239_1042883	F095133	MTNATAAAGTSGRPYPHYLERVDVLLDDTWWSIWVDFEPADPSVGLPATAWLVHAHVAEHYADIADYLSESTIKRLEAEAVDYLSEGR*
Ga0052239_104555	Ga0052239_1045554	F004786	MPNETILQQIRTPLATALSTVAGNVYSFVPETVIPPAVVVVPDSPYLEFETISKTNVRAKINFTISVAVPTTATQHRSTISSN*
Ga0052239_104636	Ga0052239_1046365	F018135	MTVERVRHSGAYVISEIVGEGARGYLFTQTYYGYTLKQAKAQFKIALKEAN*
Ga0052239_104636	Ga0052239_1046366	F011484	MQELEQFLNVEAEWVLERLSTGTESNDRNYYQGRLDQLAQVRRLLNLPQIMRERAS*
Ga0052239_104636	Ga0052239_1046368	F003212	MQDRYLVTLEIETYDGDPRAWDWSTLLGYEDKVKVIETQFKGRVLPEEGEGNE*
Ga0052239_104636	Ga0052239_1046369	F000821	MNREYLEAKFDLCINQAEIDLQQEEIARAIANLRRANSALTQLFGFEEEDQ*
Ga0052239_106148	Ga0052239_1061481	F012773	MKGPTIMIGLLGKPREFREMEGGLLDESGECPLATQDETINKGNKQKAILTARYGPSEGEEKCGNCEYGMKLKGCGLGKDEVFCDVYEFRCSKENVCDAYESMEEYEEEGED*
Ga0052239_106317	Ga0052239_1063171	F010758	GVYFSDRVESIKPMGGVVSGSPTLGWQDNEDEVLSDQLQVAQDFISALTNDPSEDWTLSSSVSLTRFVESRDDRTAGWQATMTFEIPFGHSVCEIPT*
Ga0052239_106317	Ga0052239_1063172	F001129	MLGQGGTMEFVDAAVTGRNYDFLVVNTAATFTTLTGTGSENLLTAYALSGKSVSAGIVISGRNGGKITAVTPSAGSVIGYTFL*
Ga0052239_108644	Ga0052239_1086441	F003748	IMFQVNRKEASSRYIDTEGNFQVTLVKVEENLDPKGREVCKLTFKTDDGASISDRFINQENVWFRVNQLVAATNHNVPDGTQVDFLGVKGSYANFLKAMIGLELVITTKFEEYESNGEKKKAVRLKNMKPVATSESEEKPF*
Ga0052239_108816	Ga0052239_1088161	F015329	VTKRAKLNDLTAPAAEAKSFDQWFFAQPKKVQDKMRESGVLPYREMVPSKHVFAIDPNNRAWATSDAPVERTEVDAFISRDHVGVMLKGFIDALACSGSYQIRRHVELV
Ga0052239_109135	Ga0052239_1091351	F033015	MSPEDTHTIRADIRELRDELSKVVDLQRETNRRLGKLEGRVFDLEIWRARLQGAAATSRVVWLLAGGA
Ga0052239_109137	Ga0052239_1091371	F081066	VEAHIKLKAIVKALEATIKATEQTVADEASKHGKTFQAFGAEITLKEGSITPNYEEDEVYADLKAQMKAREELLKIAFRQAGKTAIFDESTGEQVPVVXPRPPKRP*
Ga0052239_109203	Ga0052239_1092032	F017972	VRTRHLQLVSSEHSDTTSNRESVRSHFGPVNPASTTLLAQETLRANQEAQLLELLNSLENVVENLNYKSFTLYDTLNTVIEEVSAVL
Ga0052239_109266	Ga0052239_1092662	F082341	MASVMAGDREAAGAIAGMQDVYGRPLPDRGQAIRGVTGGKRWSGMCAHSDQIRVIVEIEPDVFLTVSPADIEID*
Ga0052239_109272	Ga0052239_1092723	F085348	MSQPTGIALKVTGKDGHVSFPAYEAWGWDKVNEIIAGTYAIEHVAKVEIVDVNIKEGM*
Ga0052239_109306	Ga0052239_1093062	F002036	TYNATETWANALNQGIGQVDQPGLYTMSSRSADPDTVYNIASFIADSAFGYLYEEPNGDIGYADADHRQTYLAANGYVDLDAKHALAQGLSTITRSSDIRNDIYINYGNNFNSQATASSPVSIGLYGYKSQSIQSAIHSAINAQEVADRYIAQRAFPLAAFQSITFPITNSAIDDNDRDNLLGVFMGQPLNIQNLPTQISSGVFEGYVEGWQWRTRFNELFLTINLSPIAFSQVAMRWNSVPITETWQTIDQTLTWEYATIVS*
Ga0052239_109499	Ga0052239_1094991	F006262	VFTFTVAIKRSYLRAVYSALGGSTLLAALSAKSIAASSVIESGQVVRSTSSSDVSVEFAEPGKGAPTPSEMVEMWESLLNDYDLAVYYLGQDGISNPTDAQIYNKLMTVVLIAATSYGGDFSNFRREGTFRTGIT*
Ga0052239_109506	Ga0052239_1095062	F101019	MRVHSFNDGFDAATAGGAPAGEREMLPDGTHGVTIREASEGPHKFADNNPGDFLHLTLAPNGSYGFVWVSLGSSAKDKSLAGVLATALGFTPDGWADADPSELVGRELRVTTKQVVLKSGKTRVFVNDYLPAVATAPAPERKPAARLPAQKVAAARGGEAGSGDDIPFMWMLPLALAVASMGGLA*
Ga0052239_109557	Ga0052239_1095571	F003153	MPVVVNGVKQLQKAMREVEPELNKQMVKDIKTAMLIVRDTARGYLPQQSEVLSGWGKGTASIDTIRDPKKLFPPYDYAQARTKIAYSAGQNKRSNKGFRAAFYVYNNSRSGAIFETAGRLNKPRGNRSLNPNAPAQFNAAAEMLSSMKGQGMQRGRLIYRAWFEKSNKVIPAVVSAINTVATDFNKKTQLRKAA*
Ga0052239_109564	Ga0052239_1095643	F010611	WRRKNIRAKSTTQHIEMPLTPDTTAIEQEGPYRPEEAAQPVDTATAATDSPQGAYERQKEIERAAYDLAVQALRGRRADAARLVAIHATAAKNLTSSRDEVIAQAEKERRLVSGDWVRKVMQEHDGAVSSLLKAMPKQLSGRIAPHDPEHAERELSRWVQEVALKTLHNTDPWKA*
Ga0052239_109711	Ga0052239_1097112	F013890	MGHLEFYNETTGEWTDLEDVPLFDTINCQLCNEPTQAHDIVAEIKFKDDQPIVGAWQCRKCKAVNG*
Ga0052239_109742	Ga0052239_1097423	F018914	MAKQDKFTVLRAWVAEAQTVMGLDHWEVTIVEAASDVDAWADIEAHAQQPTADLRVAFDFWKQEPEKQRLILTHELLHLVLARYARISENLEDSLGKLAWAVIEPQLEDGEERTIEHLARIIAPYLSLPAFPKA*
Ga0052239_109742	Ga0052239_1097424	F068576	ASEHRGVPTEQREFQQACAAWSLKLGVKLNALFNLMPQFGKSIHWARERYYGGTFVTDADLYWINARVNDESEIEHSAKLQRYAAAVDLMCRVCAGDEETTPSCWDQTCPLRPVSPLPLRVYK*
Ga0052239_109790	Ga0052239_1097901	F009126	MATTVLSGSPQAATPVYNKMLFKVSGSLTAQPNYRYVCDVKNPAGTTLARLKCDKLPTTSYGFFGVAKVVETLIAPTKPSLTQTGFVDHAGYYSGYRLDFMEEYGNTPVVQTGTVTTLSGNVAFAGNLEQLELATWSGGLYFPSGAIVNDTTRMLTTPTTRTVYA
Ga0052239_109811	Ga0052239_1098112	F024063	MTLEQAIYLFIGLSMASWLLLMRIDDMKQSYYWRGRKDGFDMHRRMIQNKVKTDEVFDYDKN*
Ga0052239_109814	Ga0052239_1098141	F003660	MNHETKAKLKAALATGYIMLTACLGIAFFGRFIFALLTN*
Ga0052239_109886	Ga0052239_1098862	F031490	MNAAGAVSPSSVVGSVLGTDLIVDHNISASGIVDNSAFLVAPGSVYVWESPTTNLRVNVLTSGEVEINLYGYLAIYVAKSGKGVRKYNLT*
Ga0052239_110014	Ga0052239_1100141	F006982	SIAKNTTTDYTILKSANLSNYTNRYDQFSLALAVVETGLAFVQTEAIGFNTYANSITYNVYAGGIFDPTFDQTFN*
Ga0052239_110017	Ga0052239_1100172	F020681	MVKFRCNFCSANTDFEWLDGYETHEGFRTYQCLKCCAVGVKNEAEAIDTQEPVMRCTKCGSWMFADKECFTCAILTMKEITK*
Ga0052239_110035	Ga0052239_1100351	F000141	FLWLDKLDTPEGFKAYQCMDCGCVGIKNVVEALHIPDSDISRCDKCGSWKFAAVVCHTCQLIGAK*
Ga0052239_110078	Ga0052239_1100781	F019118	IYAESCDRWLGAINSHRLQHGGQDELTQQTLSAAKLPYGDGSWIIGRRASRVAVCAAVASALATYFATQARNGN*
Ga0052239_110089	Ga0052239_1100894	F028151	MNTWLELRDLGLDVAAVMLAIGFIYWIVYEIRDTAFQNGYWKGRAHGWEMHRRMTNIKAQSDEVFDYDKN*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003099: Fresh water viral communities from Lake Needwood, Maryland, USA - June 2007

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences