NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300002643

3300002643: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5



Overview

Basic Information
IMG/M Taxon OID3300002643 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0047444 | Gp0091715 | Ga0024850
Sample NameWastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5
Sequencing StatusPermanent Draft
Sequencing CenterMcGill University
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size12013011
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin2161

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHydrocarbon Resource Environments Microbial Communities From Canada And Usa
TypeEngineered
TaxonomyEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSuncor Tailings Pond 6, Northern Alberta, Canada
CoordinatesLat. (o)57.02Long. (o)-111.55Alt. (m)N/ADepth (m)5
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F077343Metagenome / Metatranscriptome117Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
draft_101444All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin2162200Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
draft_101444draft_1014442F077343MRYEEFTVENLTVGSIFNKYGNLITPGCNPSGGLDYFVDGNKSVNGTDGLSWGRAYNTLATAIAASDISIAATRNRWWARRNRIFVVGDALSENLVKFPTKCDVIGLGSYDGFTRAGLSGRHLPVGESYGTRFFNIHFKALAHASPIITLTNAAAGPQFRGCMFDGTLGTMTSAILSTACPFLVVDDCDFMGTFVTSYITFGAGEAGGTQITRNRMLGTAANGIVAPGTTTASWMPLIQDNVIRATGMPIDEDAGVFYVVNNRLITDINIGTTTDGFDFSLALSCGNIMTGLNGVATTVPFAVIAE*

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