Sample 3300002516

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300002516

3300002516: Host associated Microbial communities of an Orange Tunicate from Islas Murcielagos, Costa Rica -Sample 27904

Overview

Basic Information
IMG/M Taxon OID	3300002516 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110189 \| Gp0090593 \| Ga0023013
Sample Name	Host associated Microbial communities of an Orange Tunicate from Islas Murcielagos, Costa Rica -Sample 27904
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	528030477
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Orange Tunicate Microbial Communities From Islas Murcielagos, Costa Rica
Type	Host-Associated
Taxonomy	Host-Associated → Tunicates → Ascidians → Unclassified → Unclassified → Orange Tunicate → Orange Tunicate Microbial Communities From Islas Murcielagos, Costa Rica

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus

Location Information
Location	Costa Rica
Coordinates	Lat. (^o)	10.854298	Long. (^o)	-85.931692	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F055778	Metagenome / Metatranscriptome	138	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
FJ528644_10000026	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	59527	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
FJ528644_10000026	FJ528644_1000002649	F055778	MLSKVDFPEPELPTIRTISPCSTDKVALSSAFTLFSSSP*

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