Sample 3300002361

3300002361: Freshwater microbial communities from Lake Mendota, WI - 30NOV2011 deep hole epilimnion

Overview

Basic Information
IMG/M Taxon OID	3300002361 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063444 \| Gp0055751 \| Ga0003626
Sample Name	Freshwater microbial communities from Lake Mendota, WI - 30NOV2011 deep hole epilimnion
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	29513307
Sequencing Scaffolds	42
Novel Protein Genes	48
Associated Families	46

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	29
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2
All Organisms → cellular organisms → Eukaryota	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces venezuelae	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2
All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus → Silurana → Xenopus tropicalis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM25	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater → Freshwater Microbial Communities From Lake Mendota And Trout Bog Lake, Wisconsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → epilimnion → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Lake Mendota, Madison, Wisconsin, USA
Coordinates	Lat. (^o)	43.098333	Long. (^o)	-89.405278	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000815	Metagenome / Metatranscriptome	879	Y
F001570	Metagenome / Metatranscriptome	669	Y
F003599	Metagenome / Metatranscriptome	477	N
F003728	Metagenome / Metatranscriptome	471	Y
F004780	Metagenome / Metatranscriptome	423	N
F005196	Metagenome / Metatranscriptome	409	N
F006499	Metagenome / Metatranscriptome	371	N
F007021	Metagenome / Metatranscriptome	359	N
F011366	Metagenome / Metatranscriptome	291	N
F012550	Metagenome	279	Y
F013083	Metagenome / Metatranscriptome	274	Y
F015168	Metagenome / Metatranscriptome	257	N
F018650	Metagenome / Metatranscriptome	234	N
F020309	Metagenome / Metatranscriptome	224	N
F021931	Metagenome / Metatranscriptome	216	N
F022592	Metagenome / Metatranscriptome	213	N
F023783	Metagenome	208	Y
F026797	Metagenome / Metatranscriptome	196	N
F027487	Metagenome / Metatranscriptome	194	N
F028088	Metagenome / Metatranscriptome	192	Y
F029991	Metagenome / Metatranscriptome	186	N
F033794	Metagenome	176	Y
F034847	Metagenome / Metatranscriptome	173	Y
F035561	Metagenome / Metatranscriptome	172	N
F037695	Metagenome	167	N
F039407	Metagenome / Metatranscriptome	164	Y
F041025	Metagenome / Metatranscriptome	160	N
F042157	Metagenome	158	N
F046199	Metagenome / Metatranscriptome	151	N
F054569	Metagenome / Metatranscriptome	139	Y
F058683	Metagenome / Metatranscriptome	134	N
F059666	Metagenome / Metatranscriptome	133	N
F062749	Metagenome	130	Y
F064383	Metagenome / Metatranscriptome	128	N
F066768	Metagenome / Metatranscriptome	126	N
F070903	Metagenome / Metatranscriptome	122	N
F081501	Metagenome	114	Y
F082162	Metagenome	113	N
F083435	Metagenome / Metatranscriptome	113	Y
F085207	Metagenome / Metatranscriptome	111	N
F088294	Metagenome	109	N
F098811	Metagenome / Metatranscriptome	103	N
F098950	Metagenome	103	N
F100715	Metagenome	102	N
F102145	Metagenome / Metatranscriptome	102	N
F103263	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
B570J29637_1000006	Not Available	19046	Open in IMG/M
B570J29637_1000034	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	11018	Open in IMG/M
B570J29637_1000433	All Organisms → cellular organisms → Eukaryota	4502	Open in IMG/M
B570J29637_1000555	Not Available	3883	Open in IMG/M
B570J29637_1001217	Not Available	2334	Open in IMG/M
B570J29637_1001678	Not Available	1847	Open in IMG/M
B570J29637_1002468	Not Available	1377	Open in IMG/M
B570J29637_1002686	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1296	Open in IMG/M
B570J29637_1002842	All Organisms → cellular organisms → Eukaryota	1236	Open in IMG/M
B570J29637_1003478	Not Available	1072	Open in IMG/M
B570J29637_1004142	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	947	Open in IMG/M
B570J29637_1005073	Not Available	831	Open in IMG/M
B570J29637_1005178	Not Available	820	Open in IMG/M
B570J29637_1005233	Not Available	815	Open in IMG/M
B570J29637_1005307	Not Available	807	Open in IMG/M
B570J29637_1005589	Not Available	782	Open in IMG/M
B570J29637_1005686	Not Available	773	Open in IMG/M
B570J29637_1005758	Not Available	768	Open in IMG/M
B570J29637_1005905	Not Available	755	Open in IMG/M
B570J29637_1005992	Not Available	748	Open in IMG/M
B570J29637_1006092	Not Available	742	Open in IMG/M
B570J29637_1006295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces venezuelae	727	Open in IMG/M
B570J29637_1006512	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	713	Open in IMG/M
B570J29637_1006867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
B570J29637_1006949	Not Available	689	Open in IMG/M
B570J29637_1007076	Not Available	681	Open in IMG/M
B570J29637_1007419	Not Available	663	Open in IMG/M
B570J29637_1007578	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	655	Open in IMG/M
B570J29637_1008006	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus → Silurana → Xenopus tropicalis	634	Open in IMG/M
B570J29637_1008055	Not Available	632	Open in IMG/M
B570J29637_1008253	Not Available	623	Open in IMG/M
B570J29637_1008255	Not Available	623	Open in IMG/M
B570J29637_1008283	Not Available	621	Open in IMG/M
B570J29637_1008480	Not Available	613	Open in IMG/M
B570J29637_1008511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
B570J29637_1008769	Not Available	601	Open in IMG/M
B570J29637_1008902	Not Available	596	Open in IMG/M
B570J29637_1009977	Not Available	559	Open in IMG/M
B570J29637_1010628	Not Available	540	Open in IMG/M
B570J29637_1011259	Not Available	523	Open in IMG/M
B570J29637_1011503	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	517	Open in IMG/M
B570J29637_1012102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM25	503	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
B570J29637_1000006	B570J29637_100000615	F062749	MKTKPSLILWALSALFMSFWAIKFAMTGVFFGNSELLTFTLSFCASLTSAVCGAGFMQQWLKK*
B570J29637_1000006	B570J29637_10000069	F042157	MNLKQKYRSPDNKQLKKIADYLIYVLLPFIQTSLALAETQGLITLKQAFWGGLAATFLLINTKFLTKFTTETPTRTAVINGDGC*
B570J29637_1000034	B570J29637_10000345	F015168	MSRQLIVGNQGRTHQVGAYQGSFKGRERIAYQDLPSIHEIEQILEQLTANITLRTEDIPMRPITLPPIYTELSEIDVYTEMARLDLQYDDLRTDKPRTASLARLCKALCIGRYIALGNQPPLQYKSWALVCPMNFENPDMPHGEQSHLAVDNSTKFIIKSMKHRDTIKDASGKTGHMIIPELYHYNNCMCASDCIANNQESLHFLRICAPRSLRQQYAEADHLPDARNAVSIGKKYGNSHTVYYSSVSVSGTVTPQMICRQPITELTRKSPIFRTPQYSHVDMSNDLHLIRAIGACLSRQEIHQYTKNFTESCKMDETTEETGNLYRFPKMNRNRQNTDILSLNPSYNSLDQALANEPLVEPFMGPQACPYCPTILQITEPKDYLLHLFDHHAILTEAYFTCPGCIAICIFNKETYPAHYTEVHSQASALIIMFTETATHIRTQQALQLSLLLK*
B570J29637_1000433	B570J29637_10004331	F021931	FAFAIMKRCAPTLLALGGTYANNVEMQLENVLPFAFPFGIGGPKMNRRVKVSLELCIQLYFRLSLSQFMEGPTILVMNHIYNRQMSYMSGVMTCRSSVDGIPLGEKLSILSTGDFEKVDEHNFDTLDSNTKAFLKAVKTSCKSVGHSEEAAKYARRKCFAMLDLFGPNSLFISTTPDDECSFRVRLYTKPQNWVSVQNLSKYSDPEYFYNHFTSTKTFPLIY*
B570J29637_1000555	B570J29637_10005553	F102145	MVSYKIHVLKILAEKMATEKQEATETLLYNFEYPMITECGAVKITDHHVFLQFPEKPTVHVEHAVKLRRNITLYVENGQCFSLDWLPIQTVTDFFRVKEMIEKCLQSYSYLLDNKTHFSPHTFSVNPINYYESLTTGFTTNSFSLSCFEHTXDTCIQLSVINKECDKKEIPLHFQLCIGKHVVFCTERDLKCVDKAKDVHFIVQFILQKMLNISLL*
B570J29637_1001217	B570J29637_10012175	F033794	MNIVKIYKEQDEIPTFIIKGTQVIDSSKYVNLWTCKEEIYVDETLVQTIHHTK*
B570J29637_1001678	B570J29637_10016781	F035561	TFFRFYLFFCNMDTVTPNFELANARLADLSERELESYLCHHGPRRYDRNELRTIIAANMQPDIYPERINVYLALAIYLYRAGHTRTVLNALQFEGFAPGPSPDRRMDESTNFGQPRFWTSYEWTLGGRRPSVRGRRTSMNWQLL*
B570J29637_1002468	B570J29637_10024681	F026797	MAASCSDGGAAVCSDSDEHIRHVAGTVALKKVAAEGNLYTFRRPDYSAEEWRFLYLTTSTDLYIDSIRLVGFCGAGDINWAIVTRMKESDNPPRESFHGIFPKECLPMLHYMRPQFRFLIYFGQNNXRVNMADELDRFFYDMXKV
B570J29637_1002686	B570J29637_10026862	F033794	MNIVKIYKEQDEIPTFIIHSKDEINSTQYVNLWTCKEEIYVDEVLVQTIHHTK*
B570J29637_1002842	B570J29637_10028422	F018650	LAEKYADWWTFKPSSPLKAYLSDREIVMDEYFSLEELRYRVMSILEHAAQFPNNSDVIVLXDQELQMVFDSWYIFVPDIIENHLLSHVIPAPVDISNDLQNKHMIEDFFVYSPVDIIYKDPSSVFWIHPFVDFAMNRSTGNVGSWNKLLFMFTEFCLNNTTYFTRFSDSIIGINVNTSLTSLFDFKFFHLSQVETLLQQITKFLGRKNSMIQSCHFITHNPTFDYITSIHPNVFTFIDYIINNHNDMMPDFKTGIFNI*
B570J29637_1002934	B570J29637_10029345	F083435	SRLPRFWYGWLGRGTLDDLTNQEYEQYLKNKDNKDSIQKAKHRNSKIRWEYRQERLKKRFIQLLAKFGIKIAHVNKDDRGDDLYEEFKKFSKK*
B570J29637_1003380	B570J29637_10033801	F088294	CDKTMSTVDIVNNSLKRWRDTVLSNERTRHNRPDTNIPLSPARLDMAAYTFSYHMNGGCALEQDCFWGNMHVXETLLKHRFEEHSSCHSGSCFKKGCECRFLFPYMSTSCTYIHEDKGDNNKNETLWYSLDGSVNTVYPFLILPKRPMGCQYMNAHNTTISYILNCNNNIQIGDASQVFYSTLYTSKSTQEEDSKKQLRIGRAVIKRIKRVLDEKNQHSSASNCNNEDTSTNAVPLAPIEPSFGEGLSRLLSGLNAATTRNVISATMAHLIPCNNGSRFVYSHDFSDLLVGQMEATLEGEITNVRI*
B570J29637_1003478	B570J29637_10034781	F059666	PTQYVQDLMSEITATRKIQYSEYERLYEYYALIRGHITEARKANLEETLLTQANIALMEQPLHMREIEEWRNRQAKYAPRYHAEAFVEFVQDREEWALKNVAYSTAPSSQSSSGEGQKGRKSYDKKEAKVMAVKATTKEEPHFPPPRRWSPDNPWGRPCIMDECSEEHAPPSCAVFKNKTPEERLAAVRRRELCVLCFRHLDTKRCWSLGKLNNCNVRGCGRGHNYLLHDVLQNEEAMMVSAVPGQTGRQESSLRCRQMVAAENEGQCFRLNVLYDWGASVSMISEEAVEVMGLISTKQAKRIIKGLGGATTVSKGTCTLGLVARNGDRKTVTAWEVGEIASLPGGEPPEDVDEQF
B570J29637_1004142	B570J29637_10041422	F066768	VLGVKLKDNAQSYKCKNYYGKKVWTVNAADVEWVECEHVNKSSFVTQLESQIKELKSDLDLRPNDHKSDKKTIKSKLVELNNKLAEEMNDRRFKLEPEQFSPEVTVKNYHASSKKIVFRCKMVQIPANSNDATTGHKLQGMSKDAIIVSSWPTGXLAAMFKNWEYVVLSRVRTLSGLYLVKPIDMDKSFQPYPQLAAYMDKIRIFTAFSRMEKPVIW*
B570J29637_1005073	B570J29637_10050732	F027487	MAXFTALDYRNKSYPFVQTIADAAGITPVSYGCYDASSDAAKLYQFYVGLATIGGLTPVTENCFVQKTEDQQYYLTNEALSAALNPVT*
B570J29637_1005178	B570J29637_10051781	F098950	MTSLSAQCYKVDTVTSIASVTEIGGRPIIFGAQTTLEEIASSKYQLCNEGSPISGEIKSIAMPEQLLNIVGLQFLKREYIVITQINVNGTVVTGEAKKIVYVNAMFVSVEGIPHNRKAYSKALEKSFKNGF
B570J29637_1005233	B570J29637_10052331	F022592	SRRGSSQPRAAGARGATPVEPVRSAGREESAAPREARELYHSQSPWGLEANRDAERRPELLAEEKALVEELLKSAELRPLVSLVEARGLGLLRSAREGDELRTGANMSALLSAVASGXEEIQRIGRDRGWSAGIXEEVLDRLQAMVREPIQMGSDVIMSSIPPKWREQATRRASEASRVIQKMTCDITTEDWSLERCQDYLVELEMATCGAMMALRLTDNDICSERVSQQVEHLSSKAREAKNMALELRQKHLDAKLQVKDRPARVPREFA
B570J29637_1005307	B570J29637_10053072	F070903	PLHPMPLEQAMEAEKPVEIIDEIDLEELFYPPPTNDGSLIAPETLIDSIPPSDLDVETQPAENPPQAPATHEIVDEFDDAQINNNKTNELAFVNSLHAHRDLSKTFRDTLRSRKEKLITFFLSKHDQYVKIPGVGEHTESDID*
B570J29637_1005589	B570J29637_10055891	F001570	MSLFYWLLLIAAISLTESIIXSTGRXQXISNVPHNTTTHTTNENQEETSLQLPRVKRQTVETLKKFINITQAIPVKTVYIPVRMHQFNKMIPFQQVYSQITNLKLTLRNLDPTSNTRTEEIQGKDVNYVKSSYPRSMNQNSLQCAERGGYVASITQIVKDRLDTRTPTATRDEISISNKILTCMFTEVNKRGLSCIEYLVNIASTLGLEFYR
B570J29637_1005686	B570J29637_10056861	F003599	GACLSRQEIHQYTKNFTESCKMDETTEETGNLYRFPKMNRNRQNTDILSLNPSYNSLDQALANEPLAEPFMGPQACPYCPTILQVAEPKDYLLHLFDHHAILTEAYFTCPGCIAICIFNKETYPAHYTEIHSQASALIMMFTETATHIRTQQALQLSLFIEVTLRLESCYPAEEQNKEPHYVSYLGGYSSNKKALFREVQNEQIKRNPLDLMHQMEETLSADFTTTEEIFNIQRPSSPIFLKQIKNKESYSEKTKQR
B570J29637_1005758	B570J29637_10057582	F037695	MLSIGQDNFSLATLDQDGKPPETRISNASHAWNIANNLRLANIGRENKRIRIYKAYKMFPPTGYSKLAEKRLPWQSDVNYGQLGFIVDNQKSSYYDVITERQACCTXXXXYGNEKERLVNSENIGIAFDQAIREWPGYLYNTEQDLEEMLLYGKGIGMWDSPLGWMPEHVFLSDLLFPDDIRIDFCNLEE
B570J29637_1005905	B570J29637_10059053	F081501	ERKYANPKQYKLMTPDSNIASHGTGYAGTVFSVFAVMISMLPELDVWFRVLASVSAIIAAWVSIYVMLAKLKKDKDK*
B570J29637_1005992	B570J29637_10059921	F064383	YSAEEWRFLYLTTSTDLYIDSIRLVGFCGAGDINWAIVTRMKESDNPPRESFHGMFPKECLPMLHYMRPQFRFLIYLGQNNSRFNMADELDRFFYDMEKVASGDASVWGAPVVIDGVHILPEVECVVPSWLRQEFFARTSDLGLPAGQHYVYPGVRSPLLLPTDYIRKYFSIYVYI*
B570J29637_1006092	B570J29637_10060921	F029991	MHEKTLFPGDETSHSFANNKYRRHMLSFPMYPFRTLCPRDAYNMNILKGGNSEFDQTSPLLPANTQLNIKFTRRPAAHLLSYMLPTNLNLNLGASHNALTQTERNNALNFTVTTPVDTQYTITGIAINIQNIYLQVSKIFYIKILKYLKLKIFEIVQYLKLKLKYLKFKY*
B570J29637_1006295	B570J29637_10062951	F011366	KECLRRAAEPHWVGSSVRRPGRTPSPVEEMPTLGASAAGKVIFACRMEVMVKTKADLRQGEYGADLSVLFCPTRQMTAVVESVAIEKGIPWRAVPEVTVMLGDGRRETSTKLFLIEVKATRSHRASKEPEPVLIAAYGVQNLAPFAAAAPELPLLRHRFPSARTASMGTLAQKAGPIDLVIARDYRKQWPSVASPSCFEADNLYLMRSNFYPGQLLYGQADPDAVGIKMKGAKRKFAPGK
B570J29637_1006512	B570J29637_10065121	F028088	EVGWVEAFQLGTTALEQWLDEADTHPDLTDSIVEYVQRWGAITMEEAILDAPPRFRHMALSQDKIGWRRFLERMMSTEITSIQPQHIAVNGSCMSLDKWCTGLITWLLEITHGQWLYRNYIVHDPVSGIIATARKEELLVEIEHQRELGDAGLLEEDKYLAEVNLEEMSTSSGERHHYWLLAIQTARNYNXLRAQRESQQMVQSEHHGARSGIHQNLP*
B570J29637_1006867	B570J29637_10068672	F039407	LKVVFGMTDLRDEGTGYLAPPRQIRRSVDRRNEELSKEVAPVINMSQG*
B570J29637_1006949	B570J29637_10069492	F103263	MRHIRQINSVGTDSYTVVIANEPLEQHPSILXHPELFEISEDDIPQKHQYXNYQD*
B570J29637_1007076	B570J29637_10070761	F007021	CRGEDPDPPAGPPPRQNQEAGQATAPVLGLGLEAIQGMTNAMNAIANQVIRSSGRSGRNAGWPYFDGTFRDYPGFKRKFESFRTTYHRGTPTRELFQQFREMCLPEKLSIRIKSANTMENAWTRLDAWFGDKNLFIKDLMQDIRSVSPIKDGDDERLMDYYVTLQAHIEEAHSAGALGMLLIPANVELMVLPLPTWEKRTWREAQGKLAAEDRPWYMSRFVNERLR
B570J29637_1007419	B570J29637_10074191	F054569	MKKITYNGQRRNKHFLIVIYHSSLVKGAMNAARLCKLRNGVKKTPQFLLFSMEKGXPSAQ
B570J29637_1007578	B570J29637_10075781	F021931	KNNTDDPSDKTVEANYKGGTYYFSTAQDPSQNTSVYGSSDIFALAMFQRSAPTLLAYGGTYAKNADMKIENILPFAFPFGIGGPKMEQRVKVSLELCIQVYMRLSLEQFMEGPTILVMNHIYNRQMSYKTGVMTCRSSIDGIPLGEKLSTLSTEDFEQINDNNNDDLNATTKSFLRAISTTCKAMGHTEQAAKDARRRCFAMLDFYGLNSLFMSTTPD
B570J29637_1007870	B570J29637_10078702	F085207	GISVAMVNKAMCKWTMPSSTGYGQAQQMTQNYAGDWEWKNPDWECNRWRKTGFYQAQFRLAAQVKDPTIMHTFLHRMPKSKNLXGSCCEVQNYIVPENNQDCYSCAGVGDIVVPS*
B570J29637_1008006	B570J29637_10080061	F023783	MHYACITHVLGLSYSCVTLRLHYACVTLVLRLCYACVTLALRLRYACVTLVLRLCYAWVTLGLHLGYTRVTLGLHLLYACEFNINIKLSRQLSVCHQSHVSLMSVCHHSVVCLQ*
B570J29637_1008006	B570J29637_10080062	F012550	MYYACVRLELLLRYATLALRLRYACVTPVLRLCYACVTLALRLCYACVTLVLRLGYTWVTLGLHSGYAW
B570J29637_1008055	B570J29637_10080551	F013083	IEINDSVTIELQDSTATFVPIFGGTVVDLGIGIAASGVVGINQSVKITAVGALARLPKALTNGVLSQDFDGDQILTILTDLLINSWNEVPAALTWAAYDPTTQWQDAENTGLGEIDTPGSYELAQRSSSTIDVYSLVSALATSGLGYIYENAQGQISYASADHRSIYLATNGYTDVSAAQALANSLFVQTRAGDIRNEIVLKYGTNSNSE
B570J29637_1008253	B570J29637_10082531	F003728	RPGSFGRNVKTMVVKESGSADQKKVRFPPPKNWNPDAKWTQNCVMFKECGEKHAPWACDAFKKLSPQQXLKKIEEXXLCHLCYRHLQGRDCWSKDKVPNCGEDGCKAAHHHLLHGALVQGRVMIVQDISTKKAGVFLCREDVRVEGAGGTSSLHALYDWGATVTLVTHAAAAKAGLEKRVQVAAAVAGLGGCCTAVDSYYMVPVVDG
B570J29637_1008255	B570J29637_10082551	F082162	AGKKLSATQIKQKYFTKNCVRVPLEIRPVMLPFFTSFEVNKDKRTLKPYMAPVNHNIIDETTWLKIVHTLMGNFCQDDDDVKGMVAMEDMGXDACVLVGYHQNVXNRLKGETCLNVV*
B570J29637_1008283	B570J29637_10082831	F005196	DPGGTPKPVEAPDGGVPGGREGIYVPEKDNTLKVLPAPEARSLRSRENEAAQQFRYVDELCAELELAVSMGNVREVKCQRRALAAGLRQAEEAIMRIAEAHRWTKAELDHALDDVRGHALPQKEEADDFLRADEQEKRGQWMSECLRMTQNAINLASQANRALTVGDWSRQDCEEFLDDLEREFKKVNKELDTYPSIDCEPXVKKG
B570J29637_1008480	B570J29637_10084801	F098811	KVGRLAIDQPGLFAHGPDEKKALSGFAEGLSIVIINTLN*
B570J29637_1008511	B570J29637_10085111	F034847	MSNITLLNQDLPDFLQTAGVSELTKQLAGRTGVKRIVPKNGIFRKVVGGEEM
B570J29637_1008769	B570J29637_10087691	F100715	MTKDECISRLKAAQKNKKELRKIKLQLLKEIEQLKLMLRALEEEEQWAS*
B570J29637_1008902	B570J29637_10089021	F046199	EISKEFDFNYITPYNFKRPIFFRRSAPPPSNKTAYLSIFCPVSYKEIQLSYKNKYEQTTTVKYGWTMFSICSYDYLDLSQWSICTTQKPNEITLVSCNKPNFTMYILNDNRVPMSLLNLGLSSLYQNKLNSALNLTKYVVPKTLSQQAPPCYLFHLSPFDLPTEESHISSHISDW*
B570J29637_1009977	B570J29637_10099771	F004780	TNRMYATLKLENRHVAVDPAGNTFLYKTEQCNTKNTVTTCNPSTIEIHREAQTCVEALMSPSQIGAEKCIQAMTLEKVNQQSYIYITENTIIRIFSPFPDTLSTLCNHTLNQTAGTIKEGYTDLSFQSDCVLYTSQLVLYSPYRPTIEETIKPLLSTPDLSTEIENLMSEIEEVHKINITTLGQEL
B570J29637_1010628	B570J29637_10106281	F041025	LSNRNAALIFLGGLEFKSFSNLTTRWVKSSLVGGCLWVIHIDKTMDGTSGCFPMEAHIAYAKKIARAVIHDNTFDGEKVDLITKNLSESEVADLDSYFSTAAFDEAREAIFHEAIQEADATIEGKI*
B570J29637_1011259	B570J29637_10112591	F000815	MDPFTQQIQRVENNDKVREIVTAFRLIPINDNAARDQLEETLTRILTPAAHKIPETQQKITDFSFTEPDLSYHDIAEKPKYRQMKHGIHYLDEDNTLYYNSAIEASEWEDENVVATAARDEATAAAEDDATIQRAYNAALARQQAINTKI
B570J29637_1011503	B570J29637_10115031	F006499	KGEQLHLDVKHEPREVDFVPFRPGNGISIYEFFQRFEDWSRGQMSQVQRANVLYNRHLDFSVTDGNKELEDAKGNYPLMKSILLEKWGIADIVCDQYLEGIKRIKMPSDPKDKVGMLTYVKNAYSRLVTLTKLEVDRGQPVPGLEDYFLSNQFLKRVHRLLPEELGSRFLMK
B570J29637_1012102	B570J29637_10121021	F020309	DQFLKFNVTPIQWNIVTGPYDAMSLQSAVNVSKTETKRVRYDPISRVVTDMEMNRMEYVPKPPANVLMNYEARLAKLPPIETFTDNEGVIRHKIYMHLSYMPNSNRWVNVQTGQPVTGLASPKEYSTAVRY*
B570J29637_1012183	B570J29637_10121831	F058683	GLNQMGIETPETCKHLGLHLGKTIEDTIQTTMRNTEPKRIKRRIMGTTPPTDLLHRALLINTALIPIYNHIFMALPVQEESMKELHQEVLDFLWTRQQDGEKIQKRRLVAKDRISASFNKGGLQVPHPSDTAEGLQLNLLQKIYNRIRLPQNFPPSNLPNILEETLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002361: Freshwater microbial communities from Lake Mendota, WI - 30NOV2011 deep hole epilimnion

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences