| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300002241 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0095504 | Gp0056725 | Ga0004671 |
| Sample Name | Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 3 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 41965073 |
| Sequencing Scaffolds | 0 |
| Novel Protein Genes | 1 |
| Associated Families | 1 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Urban Prokaryotic And Eukaryotic Communities From The Subway And Surrounding Areas In New York, Usa |
| Type | Engineered |
| Taxonomy | Engineered → Built Environment → City → Subway → Unclassified → City Subway Metal → Urban Prokaryotic And Eukaryotic Communities From The Subway And Surrounding Areas In New York, Usa |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Zanca-sant'andrea, Tuscany, Italy | |||||||
| Coordinates | Lat. (o) | 40.8 | Long. (o) | 10.1411 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F034743 | Metagenome | 174 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| JGI25716J29047_11316920 | JGI25716J29047_113169201 | F034743 | RHSVLSRTGFDNVRHRLGLAARTQISVCKSQFPSAGIAVSLFHANTVKQRPLLSREVETWLPDCGVTQMLLTVQY* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |