Sample 3300001840

3300001840: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - gte1kb - lt4kb

Overview

Basic Information
IMG/M Taxon OID	3300001840 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0094242 \| Gp0055816 \| Ga0016884
Sample Name	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - gte1kb - lt4kb
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	146151029
Sequencing Scaffolds	47
Novel Protein Genes	53
Associated Families	50

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
Not Available	27
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium SCGC AAA536-G10	1
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → Candidatus Poseidoniaceae → unclassified Candidatus Poseidoniaceae → Candidatus Poseidoniaceae archaeon	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Mid Cayman Rise, Cayman Islands
Coordinates	Lat. (^o)	18.35	Long. (^o)	-81.85	Alt. (m)	N/A	Depth (m)	2000
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001651	Metagenome / Metatranscriptome	657	Y
F002006	Metagenome / Metatranscriptome	605	Y
F002030	Metagenome	601	Y
F002715	Metagenome / Metatranscriptome	535	Y
F002753	Metagenome / Metatranscriptome	532	Y
F004642	Metagenome / Metatranscriptome	429	Y
F004881	Metagenome / Metatranscriptome	420	Y
F005399	Metagenome / Metatranscriptome	402	Y
F005400	Metagenome / Metatranscriptome	402	Y
F005610	Metagenome / Metatranscriptome	395	Y
F007241	Metagenome	355	Y
F010693	Metagenome	300	Y
F015945	Metagenome / Metatranscriptome	251	Y
F017150	Metagenome / Metatranscriptome	242	Y
F018808	Metagenome	233	Y
F019664	Metagenome / Metatranscriptome	228	Y
F022431	Metagenome / Metatranscriptome	214	Y
F023622	Metagenome / Metatranscriptome	209	Y
F023712	Metagenome	209	Y
F024888	Metagenome	204	Y
F031644	Metagenome / Metatranscriptome	182	N
F035361	Metagenome	172	Y
F037771	Metagenome / Metatranscriptome	167	N
F038276	Metagenome	166	N
F042379	Metagenome / Metatranscriptome	158	Y
F042560	Metagenome	158	Y
F049215	Metagenome / Metatranscriptome	147	N
F051978	Metagenome / Metatranscriptome	143	Y
F052659	Metagenome / Metatranscriptome	142	N
F054098	Metagenome / Metatranscriptome	140	Y
F054945	Metagenome / Metatranscriptome	139	N
F058220	Metagenome / Metatranscriptome	135	N
F060977	Metagenome / Metatranscriptome	132	Y
F062834	Metagenome / Metatranscriptome	130	N
F062842	Metagenome / Metatranscriptome	130	Y
F068126	Metagenome	125	Y
F071317	Metagenome / Metatranscriptome	122	N
F074979	Metagenome	119	Y
F080654	Metagenome / Metatranscriptome	115	N
F082824	Metagenome	113	Y
F084712	Metagenome / Metatranscriptome	112	Y
F085813	Metagenome	111	N
F089571	Metagenome	109	N
F092223	Metagenome / Metatranscriptome	107	N
F092699	Metagenome / Metatranscriptome	107	N
F095744	Metagenome	105	Y
F096028	Metagenome	105	Y
F096818	Metagenome	104	Y
F101330	Metagenome / Metatranscriptome	102	N
F105349	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
shallow_1004411	All Organisms → cellular organisms → Bacteria → Proteobacteria	3162	Open in IMG/M
shallow_1005257	Not Available	3056	Open in IMG/M
shallow_1006736	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2896	Open in IMG/M
shallow_1007070	Not Available	2858	Open in IMG/M
shallow_1008716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2705	Open in IMG/M
shallow_1010295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3158	Open in IMG/M
shallow_1011270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2504	Open in IMG/M
shallow_1011374	Not Available	2497	Open in IMG/M
shallow_1012844	Not Available	2394	Open in IMG/M
shallow_1014049	Not Available	2323	Open in IMG/M
shallow_1015721	Not Available	2231	Open in IMG/M
shallow_1020011	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2851	Open in IMG/M
shallow_1021495	Not Available	1976	Open in IMG/M
shallow_1024200	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
shallow_1025874	Not Available	1825	Open in IMG/M
shallow_1026353	Not Available	1810	Open in IMG/M
shallow_1026753	Not Available	2471	Open in IMG/M
shallow_1029280	Not Available	3011	Open in IMG/M
shallow_1031697	All Organisms → cellular organisms → Bacteria → Proteobacteria	1662	Open in IMG/M
shallow_1031715	Not Available	1662	Open in IMG/M
shallow_1033178	Not Available	1627	Open in IMG/M
shallow_1033638	Not Available	1617	Open in IMG/M
shallow_1036453	Not Available	1554	Open in IMG/M
shallow_1038056	Not Available	1519	Open in IMG/M
shallow_1038545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	1509	Open in IMG/M
shallow_1040067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1480	Open in IMG/M
shallow_1041021	Not Available	2318	Open in IMG/M
shallow_1042037	Not Available	1444	Open in IMG/M
shallow_1044403	Not Available	1403	Open in IMG/M
shallow_1047411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1471	Open in IMG/M
shallow_1048228	Not Available	1341	Open in IMG/M
shallow_1048874	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1331	Open in IMG/M
shallow_1052807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium SCGC AAA536-G10	1274	Open in IMG/M
shallow_1052982	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Candidatus Poseidoniia → Candidatus Poseidoniales → Candidatus Poseidoniaceae → unclassified Candidatus Poseidoniaceae → Candidatus Poseidoniaceae archaeon	1272	Open in IMG/M
shallow_1054213	Not Available	1256	Open in IMG/M
shallow_1054936	Not Available	1246	Open in IMG/M
shallow_1055139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1243	Open in IMG/M
shallow_1056568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1225	Open in IMG/M
shallow_1060956	Not Available	1174	Open in IMG/M
shallow_1062564	All Organisms → Viruses → Predicted Viral	1155	Open in IMG/M
shallow_1065675	Not Available	1123	Open in IMG/M
shallow_1069742	Not Available	1082	Open in IMG/M
shallow_1070172	Not Available	1078	Open in IMG/M
shallow_1071031	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
shallow_1077063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
shallow_1081125	Not Available	1068	Open in IMG/M
shallow_1082554	All Organisms → cellular organisms → Eukaryota	1066	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
shallow_1004411	shallow_10044111	F010693	MTGLLIFGLVVLATICLWILIEERKSWKFLVWFIPILLVVVTSTYVTYTSLLGFPKVGIPEKGMYLRHYIDEPNWIYLWVLSKKNVPMSYQLVYTKKKHD
shallow_1004411	shallow_10044116	F005400	LIDTNMCYRCSYCDQGFNQIYSLNQLAIEYFICDRCVKYYKLTIKDLIELRYVRDRQEWQDADCWPGKGFFPYPIGFDE*
shallow_1005257	shallow_10052573	F018808	MSEYTPIQTVKHSSVIREGDDSELNAIRIDEGKFKGLIYLYEDVMMGEETKEGGMNLHFTIKHAKWENTNHLDNEKEFHQVAGDILVSCLEKGLKEDNEFEIIYRDNDTRSLDDQRRVRKESLTLSED*
shallow_1006736	shallow_10067362	F038276	MNLDFLLRLTNYVNNVGTNYLAVIKQFLTVLVIINHACVLLHGNHNYKDVFYDRLSNQYIRNACDFHNLHISYNNLGLVLEKFLLYIKIINNKV*
shallow_1007070	shallow_10070706	F101330	VSLCGFIGVCIGYFTGHQEICIMIGVGIGILIRFVQSKSK*
shallow_1008716	shallow_10087162	F105349	MKTLVFQSKIGEGSLTWDRRDMSQLKIDHLIIENCLTSVQSWCKKLGYEYKFVTQDLKWNFEFLSKNDVQLNCAFQNWTHLPKEGYDQIIYLDNDVFIFKDAGSPPIVDFGLVCRFGDQIQYARHYCGNNSLWWNSGVIVMSQKRCKHLSSWMLDYIPRAREFQLFRDLPREESLITEYCAKYKPNKLDPIWNTMPPQTPVPMYSEAKFIHLLGASKLNTLLKCPKEIQKVVMKNIDISEKTTESSVGEALNWQ*
shallow_1010295	shallow_10102952	F052659	MLLSGNPGTETRSAVFIDGRLISSELNYQTIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVILWAEV*
shallow_1011270	shallow_10112704	F019664	VKDTDDDKQVDGSDEGAIPSTSTNLRGPYDGIFEFSEKQREYYYTQREWDRTIGYGKVPDEGNTEIRGVKQDRRTDETLFEESDT*
shallow_1011374	shallow_10113741	F022431	MIAKYIANKFLPVGTPVFHKLGDGELLSLIGWAEDWPLERVYDIAFEQVFPEKQLVDSKPDFDEWLTADNPKLPMIVREELIRAFRIHMATGRMDVLRLGVMLSTYAKRIM
shallow_1012844	shallow_10128441	F084712	MKTFKEYSLDRKLDKYVSDEIKKRKLAKHPVNATDDIKMRMKPNKPAFKFPSPTGSMMIH
shallow_1014049	shallow_10140493	F092223	MADTSINKGLILSLLVGFLVQAGGFVWWMSGLNSEVQRLSGIQGVSIPALKAEAKLSGITIQNNEAAIKELQEHDKAISGLDVLNFKVEQLRDEIATLREVNREIMTQHEKIFDWMSMNSGGNSGGGSNPYGSSYGN*
shallow_1015721	shallow_10157211	F085813	CNLKNNCVTKMDEFEIIWILVTVIGALNYGLNAYQKGFRRLLKWDVIYLIILNTLMFVPLSLIVVF*
shallow_1020011	shallow_10200114	F080654	VVAEVISEETAESEPVGKTDLEERQNLWNKIHKFDPEASAMDYYDNSEWDLEKMRSDLKVLLEKEKFGR*
shallow_1021495	shallow_10214952	F015945	MMPDTPTEAEIAAHFSAMDDSVTLIHATIADDTDALKMMDAAEVKLMVTRNTDHLEIQSAKDWYSESSNSKTPYTEAVTAGKAYVAE*
shallow_1024200	shallow_10242003	F062834	GDMAAAGDAFMAAADARRGDAWQQAKTDYAQRAFKEVDLGPVSAGQDTGITGDPAEVED*
shallow_1025874	shallow_10258745	F024888	MNLDKIDLKNIHKIVGKIVDGIQKEEMKGKTPDEFAQERGFDNWLEYAAWSRHTGGDYHMMEMMLKSKWKEQDPEEFARQKKIEGDQRTREHSYIGILDEEKIKKKNNGHKYYKPVHKSEFSAEELEVIYDERGVGGEPVEYRW*
shallow_1026353	shallow_10263531	F082824	MKKKISERLMTTKQQVGQMNRYWKDLDHLASDDVKKKNMDRRFGIRNIKLDRYGNIISFDKYKRG
shallow_1026353	shallow_10263532	F005610	MYKMKTFKEYLTEADSEEVRDAKKVFTALQGMYPKIPKFPLVFKNLKGRGSGYLETSKLKGGKFIFVDKMVIDDSGLGSFEPDYAVVHEFAHAILAVTKGDLGHNKKHADLTYKLAQKFGLA*
shallow_1026753	shallow_10267537	F002030	MIGLLIFGLVVLSTVFLWILIEERKSWKFLVWFIPVFLVLVTSTYVTYTSILGFPKVGIPEKGLYLRHYIDEPNWIYLWVLSKKNVPMSYQLVYSREKHNALEGVKGQAAEGAFMVLGEDESLGPGDGEGDQKGGRSGEGYTIGGDISFYKWDFTDNMPLKDTQE*
shallow_1029280	shallow_10292804	F049215	MYAAYLVSCTEPMEYVTRELTIWNKYVSNGYDNYDDEIEVNLKLGSRDWFWLYDSGDRVKIYSNSSFTWQFEFHEDFDSLYVHARFYYTKDLIIELVVADTALRMDSDKTLMFWNCGDTTVVEYPFPACFTEVDSL*
shallow_1031697	shallow_10316972	F074979	MEIKVYIHDNKNIEASSKILKLLKDCKLDFATEVFGHFKSDEEAYIANVVGEKVKKLPHVVIDGERVGGYYDLVEYLMKKNIINYAGEPTWKMNN*
shallow_1031697	shallow_10316974	F051978	MEYTIYASLILITLMCLWALISIPKNYLFKSLLIPVMILVAVSTWYTYNAILGYGTEFKPTQEVIYHSHVADKKADKIYVLLTTFGDDAPRLHIYPWSEELEKQLEGADGQKKAGILVVGVIKKNDSAQNRPMSDDEPYQFYIMPPNEFMPKDS*
shallow_1031715	shallow_10317152	F004881	MSYTFFETPGKPYQECTNPNDPEDKSLCVLVQDGSNFDGAIVRYTTFKLLEQELTGGEIACRYEYEIEVPPHAIKHKITDEEGKEFEKKLGKWVIEILQKQMDKHAAKSRSTDTEKSNT*
shallow_1031874	shallow_10318741	F062842	MMKWMLIIVLASALSLNGCADTADAEDSTAITPVDNQESTDSSTDSSGETIWIAIVMTWNPVNRTIDKEFTTEVACWNYYENGVGEGKFGTQHLDHQDNPPTKDFNFGPDH
shallow_1033178	shallow_10331781	F017150	DWLQDSIVIENVIMGQAHDQLIVELEQAVYDNTRSMYNPPSSHISIVGFSPADSDVVVKSGVNYWVDSDNIFAQ*
shallow_1033638	shallow_10336382	F071317	MLKKITAIGLITLFAGMTAAPFIPLDDCNMPCCAGIATSCCEMDREITCATMSDCGSSVFMLIVSGPFHKSELKSSDIFSQRFVTDLGIPKIETNYIACLGNFDPGPIASMNLPLLI*
shallow_1036453	shallow_10364533	F042379	MIFADGWTQSINTSDEGQERADLATYISDTFKGINGFRPRWWNLNTWALEDLRAEAKSLEDEVVVSIERERAEEARRQAEMADHHLAVAKAMKPVSPTFKPFANLKEMLV*
shallow_1038056	shallow_10380565	F005399	MKAAIELDVFQEVKLDEDTGEIVMRPMAEMMDAPLDFIDEEDEPEWTSLLQVLTETIIDPYTVPASTEVPNEKDYHMIVAASEDLFKVAGDFARKVEGLHTIDPKEYEERISRFEQGTFWPTEEQKMHMEEHGPGPNEER*
shallow_1038545	shallow_10385455	F042560	LIFAPSVKLRKKGKFPIVSMVTKNNIKEFIKVAIMLVFHISSWQ*
shallow_1040067	shallow_10400671	F095744	VGYIRIHLVSVLTYLTSSLQTSLQNQTKREGYEKDDYNN
shallow_1041021	shallow_10410212	F004642	LTIVLFLYLLIMDKPAFSETVPNELKELGYVPPIIKSYDKNGINVWLDKRRKWYDVPFWQFTMDGVQWMVLDERHGSASQFYSHYKLAKGHVICTGLGFGTREQWLASKPEVTKITVLEKFKEVIDYHKDIGTKWPDKIEIINCDANDYKGSCNFLSIYDDVLRILDSIKKVCNNITCESAWFWMLEPWIRLGYITDNTENPTIIPKKIRYGGKENDILENYSKIKTYFEHVNLPNLNKEQLIKFIEMY*
shallow_1042037	shallow_10420371	F054098	FCASSMLRHVNGIVKEVETANQSNSQGAADADVQAEESQAKERAWE*
shallow_1044403	shallow_10444032	F054945	MKWVILIYLAMWTNTPEVMKYTVLEFPAYDYYDCIDIAEEINDIETAYNSETAYVRSFYWVYNNMLDDIKAECVYADPIATPPKWFKEYTRKQWLEKFEHE*
shallow_1047411	shallow_10474111	F007241	RTGTVTIKNISRAMLISEISWSMLVSANSPTDVKTINGIVITHSKLIIAVSDIESATSPFAKEVNKLDVTPPGAAAIIITPIANSGAIGHIHIFKRIKAIIGSKIICEKVPTKKSRDCLATLKKSPPVSPNPNANIMKANAKGKNTSVTIPINIIIIRVL*
shallow_1048228	shallow_10482282	F037771	VVRTACPALVVFDGYRGLHDGDRTAAAGLKALLGCEDSTYWNNWSERGDSLKRRFDRASAWLEVRLGNITDVNVIGLSMGCQLAVRFVHHASIKAPSIEFGQLVLIAPDPKYRAVGRDAEEIKVGTSSAFEEAVALWGGRGLAGPRFVSGLADAANRMERTRIVYCRSDGVAEWSANVELMVDELPATTGIELIEAIDGEVISTADMTVDLGVANPELDVHDRLWESISFV*
shallow_1048874	shallow_10488742	F089571	MMNMVKEKERKMLQNIIVLIISVLFLITPVSSQHVKQKYAITDKDEKVFLNDNGTWEYLGEDKQNYTLKKVPPKTYNYEFKPQTWEERLEQAAHEYWRIRAYAELNQLGIPVTRYDPTTSDVPLYLKLEGGRIRTDFDPFTPLARGEVINIAGLWNPDRGDNPTLKIQGKLFLQITMKLVDQKKLFSQYNQRNYIPISEDFQRILKFRDSLDVISLGMHDYNRDNTHIWPGIPHSFLYAPPGSPYDPDNPPVIRGDGFPYIQRGHLTLARREIPMTNAE
shallow_1052807	shallow_10528071	F051978	MEYTIYASLIFITLMCLWAIISIPKNYLFKSLLVPAMIGIAISTWYTYNAILGYGTEFKPPEEVIYHSHVADKKAGKIYVLLTTFGEGEPRLHIYPWSEELEKQLRGADGQNRGGVLVVGIIKKNKVAHSKLMPG
shallow_1052982	shallow_10529822	F092699	MLKPKIPMIVIAAFLILNAVMMIAIPVAFDKDYIEADMENPTTEEGQVYEGLAAHNKAGLGAAMAALAIVLLMHINQPERAAKRVLLSVGIGMILLFIVIGLGGVRGLVDAPPLVPIIMGAIIGGVSIWVYNSPDEKELITSDEEE*
shallow_1054213	shallow_10542131	F058220	GVRHGEPWRPNQPLVDALLETEHPVFVWSGGGAWYAEIIAGKLGLDFPCLDKYETAFELIHEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPNQL*
shallow_1054936	shallow_10549362	F002715	MPEEELQSVKLEVGLLKNEVEVRGRQIDTLLTKLDHTADKLQELTVEIKTLNARQEDYLRANISMSDEFKILHTRIGDVQDKLSSNNRRIEERLDHLDQYKSKLMGMIIVVGGVVGTIVATAISIFLKE*
shallow_1055139	shallow_10551393	F001651	QRRHRVIQAKIEGRSEAEIAEQEGVAQYTIWKDIRAYLGEVRREDKEAVQAEYDLQRARYERLLLRWWDHAIGEDSDHAARATGIVLDILRRLDTIGGLIPEKPLIQLQQQNVMVGGVTFADLLREAMDGTGA*
shallow_1056568	shallow_10565682	F015945	MFDTPTEAEIAAHFSAMNDSVTLINATVADDSEALLIYGNDAEVKLMVTRNTDHLEIQAAKDWYSDSSNSKTSYTGAVTAGKAYVDE*
shallow_1060956	shallow_10609561	F002006	MPEELQSVKLQVGLLQQEVEARGRQIDALLSKLDSTADKIVELTVEIKTLNSRQERHSKVDDEIRSELKLLHSRAGSIHDEIGKSERRVSDSIHKLEERVRAVEQWKSRLMGMTSLVAG
shallow_1062564	shallow_10625643	F023622	MKTFKEFQGKTPTQKIVEQVYFKVSIPDLSPMFMKASSESAVKLDMRMKLKPDVVKEISIKRVTKAEMRKIYRAMGQGKEPESDEKEKEE*
shallow_1065675	shallow_10656752	F060977	MKKLLMALMIMLPVSAYALSVNVENDVNVSVGGATFGVDQGGNKVSVGVSGLTFSTSDTVDFGVAYSTSLLGGLEAGLSYDYTNESDHVVGVDTSFEYVGINLDADFDWNITDTDFDAKLGTGYTLLGVDGSVTSKWDVDDFSYEGMDVTAGYTWAVTDTFSVRPNLTVPFDDGFSRGDLTAGVSISLSFGGTSTE*
shallow_1069742	shallow_10697421	F068126	MVVALILNGCAKNVADKNNDLGSGDKSNLPISLNSLIEHAELCKAIYDL
shallow_1070172	shallow_10701721	F022431	YLAKKVVPAGAPNFHQLGDGELLSLIGWAEKWPLERVYDTAFEQVFPTKQLSDAKTDFGVWLMADNPKLPTIVREELIRAFRIHMATGRMDVLRLGVMAQRYAKRAMYVGLLLLFLFLVF
shallow_1070315	shallow_10703152	F035361	MNPALSSAGIVDMMVGVQNMIEASDIQKGDQILILADRRSDPVTVEALSVGLTALGAHPMELVTEPIGRYGVIPQPVINAMEASDVVIWVWPVFLTFTAAYRAMGRKREESGTQLKEARLKPYFVYFEGGPALLARDYAK
shallow_1071031	shallow_10710312	F096818	LVAYGAGRAAANRTIYPTGWPPYGGGTSKVWGPSRLVYGAKIAFEKWWLWRYF*
shallow_1077063	shallow_10770633	F096028	TISVDFRVDWASFELIDGDFHSHSFGGSVKRNDLMLDEN*
shallow_1079076	shallow_10790762	F031644	MNERIPVTWEDIAWSNMYSIEAVINILEAKGLITKKEVLKELKRIKIKQHKEIN*
shallow_1081125	shallow_10811253	F023712	MYKLTWKDEDTNRVSSKEFTGQSGVDHSAMDDALAMAQVVDGNLWPWSLERDGQEISYGWGGEQLNRGRLFPTCG*
shallow_1082554	shallow_10825542	F002753	LIXXXXFTPAAFEIESVKLTVSDRFTPAVFEIESVKLTVSDRFTPSVFDMESVNDTVSDRFTPAAFEIESVNNTVSDRFTPAALDVSSVNDTDSDRFTPADFAIESVKLTDSDRFTPATFDIESVKLTDSDRFTPADFAIESVNDTDSCP*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001840: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - gte1kb - lt4kb

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences