NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001265

3300001265: Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY84



Overview

Basic Information
IMG/M Taxon OID3300001265 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0085351 | Gp0053823 | Ga0012459
Sample NameMacroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY84
Sequencing StatusPermanent Draft
Sequencing CenterJ. Craig Venter Institute (JCVI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size1227405394
Sequencing Scaffolds7
Novel Protein Genes7
Associated Families7

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Eukaryota1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae1
Not Available3
All Organisms → Viruses1
All Organisms → cellular organisms → Bacteria1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMacroalgal Surface Microbial Communities
TypeHost-Associated
TaxonomyHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Surface (saline)

Location Information
LocationAustralia: Botany Bay, Sydney, NSW
CoordinatesLat. (o)-33.966629Long. (o)151.166614Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F009787Metagenome313Y
F012678Metagenome / Metatranscriptome278Y
F018540Metagenome234Y
F082762Metagenome / Metatranscriptome113Y
F088352Metagenome109Y
F091615Metagenome / Metatranscriptome107N
F093339Metagenome / Metatranscriptome106Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
BBAY84_10005214All Organisms → cellular organisms → Eukaryota3692Open in IMG/M
BBAY84_10034417All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae1407Open in IMG/M
BBAY84_10070247Not Available949Open in IMG/M
BBAY84_10096872All Organisms → Viruses792Open in IMG/M
BBAY84_10132892All Organisms → cellular organisms → Bacteria661Open in IMG/M
BBAY84_10210428Not Available509Open in IMG/M
BBAY84_15154824Not Available501Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
BBAY84_10005214BBAY84_100052143F093339MVLSNDLFNAIANKLKLKTSLLNEERLYVENLLNKIDHLKKLREDNYKTLSVKKTTYQKNIENDTNLIVMYIISISFLKANTTIHVSDVKGNIKLFYSAGSVGLGGKQKKKRLIAVSKLISLMLKKAIFLGKKPVALHLNNVNFYNSLIVNKLKKSLYIKVIKSFNQTPYNRLFWEQEVMCSNHIISNLYPFF*
BBAY84_10034417BBAY84_100344172F082762MLDLILRSSPYLFPGGRALKLVKNGVNTINSTNPLILTKNITLTVLDCCAPPPLRLAAHCVGVGALITASVVSPNPVTVGSAIHLVTEIYEQC*
BBAY84_10070247BBAY84_100702471F018540MDRNRLAWWDNFNEELYCNYLTQKDEKMNTYRILYKTYKGNNTDAPVVQAVKYVQAYDKAEARKLFDLWKGLIISIDKV*
BBAY84_10096872BBAY84_100968722F009787MKAIYLICVLTLFSCSAKYHYNKALKRGLEVIKTSDTIRITTIDSVPVIKHDTIVYEHFYTQKDTIVFYKNIEIPKTRLETRIEYKLKRDTIKMITRVEVQKAKADGKKNKKPNYWLMLIFVCVFGGVVFIASKLVNKYL*
BBAY84_10132892BBAY84_101328922F012678MLNQHSLEEIADIHNLLEDIKKEYNYGIKPILINHSPSRFKNPHTVPKLKKIQINRGLGLAAQSTNILKKNIP*
BBAY84_10210428BBAY84_102104281F091615MSKDYFNTLPSGYIEYVDKIMGNLVVGAHKGPEFSDDWDIRLDDLNGNPIFSINGENSYPIYRVNYNPSAFLFNMVPMGGEGEQLEFLTQVYEKYNLERLIYDFFEKKNM
BBAY84_15154824BBAY84_151548241F088352TSLETGNTVFRTIETQDQLEKFRELEGYDITVMPVVHSSEEVCVACEG*
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