| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300001203 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0085351 | Gp0056494 | Ga0012576 |
| Sample Name | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY85 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | J. Craig Venter Institute (JCVI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 984156678 |
| Sequencing Scaffolds | 7 |
| Novel Protein Genes | 7 |
| Associated Families | 6 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Nitzschia → Nitzschia ovalis | 1 |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Haslea → Haslea avium | 1 |
| Not Available | 2 |
| All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Macroalgal Surface Microbial Communities |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Surface (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Botany Bay, Sydney, NSW, Australia | |||||||
| Coordinates | Lat. (o) | -33.966629 | Long. (o) | 151.166614 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F024806 | Metagenome / Metatranscriptome | 204 | Y |
| F028441 | Metagenome / Metatranscriptome | 191 | Y |
| F038196 | Metagenome / Metatranscriptome | 166 | Y |
| F046726 | Metagenome / Metatranscriptome | 151 | Y |
| F094641 | Metagenome / Metatranscriptome | 105 | Y |
| F100465 | Metagenome / Metatranscriptome | 102 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| BBAY85_10001654 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae → Nitzschia → Nitzschia ovalis | 7878 | Open in IMG/M |
| BBAY85_10001925 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 7316 | Open in IMG/M |
| BBAY85_10014579 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Bacillariales → Bacillariaceae | 2380 | Open in IMG/M |
| BBAY85_10020217 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Haslea → Haslea avium | 2006 | Open in IMG/M |
| BBAY85_10086572 | Not Available | 914 | Open in IMG/M |
| BBAY85_10213173 | All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum | 545 | Open in IMG/M |
| BBAY85_10215279 | Not Available | 542 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| BBAY85_10001654 | BBAY85_1000165413 | F046726 | LGRITEQERIEIIQRGFQLQADSKISLKKYYESTRQYSLFQLKGYSIKYETVRRTKLYQQLAKENKN* |
| BBAY85_10001925 | BBAY85_100019255 | F028441 | MTLKQLIKLEDKAKEVWVVSPTLHYDTENKDFSEIVSVNLGEKTKYKYIVPASKTVLKNIKLYKKMYNVTEADISENFLILPESEFNPFLEETAIYDASTKCIACCAPATEDSNDVIKFNATTSANMAKAFKALWKKYKRTNP* |
| BBAY85_10014579 | BBAY85_100145794 | F100465 | LLHTFFQKNASEAWNLVSMDFIDLCPAIMSLLVGFNFSNIDVVLATVQYGNPNFYRPSMSVTSKVQSHVVRNKVLFLNVGRDFGSNFGTLTLAYKIMDKYYSIVIHFDGTSVIVLNEYNHLQAGSREIVIEKGEEEGSVNPGGGGTIMTWSREEEGDGIEFDFDSPF* |
| BBAY85_10020217 | BBAY85_100202173 | F046726 | LSNLSEEERVEIIKLGFQLQAEGKISLKKYYESTQEHSLLQLEGYSIKYETIRRTKLYQQFKR* |
| BBAY85_10086572 | BBAY85_100865721 | F024806 | MITNSNFNFTENPSIVLELPFSEHIEELRQRIFLLGWIILILTCLAFIEVKS |
| BBAY85_10213173 | BBAY85_102131731 | F094641 | QSNSERPGSDLYSVKWDGKELKQLHDRLCFTPRSVADMSPLETARAVDALMFLSEKRDGTIKGRMVYNGKPTRAWLSREESASPTAALESIFLTAIVDAKEERDVMSNDVPNAFIQTPLPPTPKDSPRVMMKITGVLVDLLVEMAPEIYGPYVVYQRGRKVLYVEVLRALYGQLFASLLW |
| BBAY85_10215279 | BBAY85_102152791 | F038196 | MENLIETLRNRKTGYGHFNISIEMDGKELSTTTTNTMAIDAAFDDCYDDEDNDGRYYESRFKAQEALVNEILRANDIEM* |
| ⦗Top⦘ |
 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |