Sample 3300000729

3300000729: Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35

Overview

Basic Information
IMG/M Taxon OID	3300000729 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0075432 \| Gp0054556 \| Ga0001958
Sample Name	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	36195402
Sequencing Scaffolds	74
Novel Protein Genes	81
Associated Families	75

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6
All Organisms → cellular organisms → Bacteria	11
Not Available	26
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	5
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Tropical Forest Soil Microbial Communities From Luquillo Experimental Forest, Puerto Rico
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil → Tropical Forest Soil Microbial Communities From Luquillo Experimental Forest, Puerto Rico

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → tropical forest → forest soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Luquillo Experimental Forest Soil, Puerto Rico
Coordinates	Lat. (^o)	18.0	Long. (^o)	-65.0	Alt. (m)	N/A	Depth (m)	.1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000136	Metagenome / Metatranscriptome	1961	Y
F000442	Metagenome / Metatranscriptome	1132	Y
F000643	Metagenome / Metatranscriptome	965	Y
F000945	Metagenome / Metatranscriptome	825	Y
F001121	Metagenome / Metatranscriptome	771	Y
F001463	Metagenome / Metatranscriptome	690	Y
F001490	Metagenome / Metatranscriptome	685	Y
F001736	Metagenome / Metatranscriptome	644	Y
F002989	Metagenome / Metatranscriptome	515	Y
F004161	Metagenome / Metatranscriptome	450	Y
F004609	Metagenome / Metatranscriptome	431	Y
F005718	Metagenome / Metatranscriptome	392	Y
F006520	Metagenome / Metatranscriptome	371	Y
F008634	Metagenome / Metatranscriptome	330	Y
F012135	Metagenome	283	Y
F012638	Metagenome	279	Y
F012657	Metagenome	278	Y
F013118	Metagenome / Metatranscriptome	274	Y
F013709	Metagenome / Metatranscriptome	269	Y
F013922	Metagenome / Metatranscriptome	267	Y
F014533	Metagenome / Metatranscriptome	262	Y
F014766	Metagenome / Metatranscriptome	260	Y
F014866	Metagenome / Metatranscriptome	259	Y
F015758	Metagenome / Metatranscriptome	252	Y
F016419	Metagenome / Metatranscriptome	247	Y
F018757	Metagenome / Metatranscriptome	233	Y
F019874	Metagenome / Metatranscriptome	227	Y
F021652	Metagenome / Metatranscriptome	218	Y
F022968	Metagenome / Metatranscriptome	212	Y
F028026	Metagenome / Metatranscriptome	193	Y
F033561	Metagenome / Metatranscriptome	177	Y
F034030	Metagenome / Metatranscriptome	175	Y
F035091	Metagenome / Metatranscriptome	173	Y
F036023	Metagenome / Metatranscriptome	171	Y
F039255	Metagenome / Metatranscriptome	164	Y
F039846	Metagenome	163	Y
F043066	Metagenome / Metatranscriptome	157	Y
F044217	Metagenome	155	Y
F044218	Metagenome	155	Y
F045257	Metagenome / Metatranscriptome	153	Y
F045732	Metagenome / Metatranscriptome	152	N
F048473	Metagenome	148	N
F053447	Metagenome / Metatranscriptome	141	Y
F053923	Metagenome / Metatranscriptome	140	Y
F057631	Metagenome / Metatranscriptome	136	Y
F057789	Metagenome	135	N
F058548	Metagenome / Metatranscriptome	135	Y
F058767	Metagenome	134	Y
F063348	Metagenome	129	N
F064047	Metagenome / Metatranscriptome	129	Y
F065038	Metagenome	128	Y
F065335	Metagenome / Metatranscriptome	127	Y
F066972	Metagenome / Metatranscriptome	126	Y
F068021	Metagenome / Metatranscriptome	125	Y
F068169	Metagenome / Metatranscriptome	125	Y
F069634	Metagenome	123	Y
F072153	Metagenome / Metatranscriptome	121	N
F074315	Metagenome	119	N
F075781	Metagenome / Metatranscriptome	118	Y
F076808	Metagenome / Metatranscriptome	117	Y
F078037	Metagenome	116	N
F079007	Metagenome / Metatranscriptome	116	Y
F081851	Metagenome	114	Y
F083188	Metagenome / Metatranscriptome	113	Y
F083197	Metagenome / Metatranscriptome	113	Y
F083637	Metagenome / Metatranscriptome	112	N
F086229	Metagenome / Metatranscriptome	111	Y
F087577	Metagenome	110	Y
F091102	Metagenome	107	N
F094701	Metagenome	105	N
F096474	Metagenome / Metatranscriptome	104	Y
F098285	Metagenome	104	Y
F103827	Metagenome / Metatranscriptome	101	Y
F104209	Metagenome	100	N
F104533	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI12371J11900_1000162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3722	Open in IMG/M
JGI12371J11900_1000164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3719	Open in IMG/M
JGI12371J11900_1000286	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
JGI12371J11900_1000351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2888	Open in IMG/M
JGI12371J11900_1000442	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
JGI12371J11900_1000487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2577	Open in IMG/M
JGI12371J11900_1001192	Not Available	1873	Open in IMG/M
JGI12371J11900_1001197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1869	Open in IMG/M
JGI12371J11900_1001279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1812	Open in IMG/M
JGI12371J11900_1001298	Not Available	1802	Open in IMG/M
JGI12371J11900_1001499	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
JGI12371J11900_1001580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1639	Open in IMG/M
JGI12371J11900_1001807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1544	Open in IMG/M
JGI12371J11900_1002172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1430	Open in IMG/M
JGI12371J11900_1002488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
JGI12371J11900_1002623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1301	Open in IMG/M
JGI12371J11900_1002724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1276	Open in IMG/M
JGI12371J11900_1002782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1263	Open in IMG/M
JGI12371J11900_1002809	Not Available	1258	Open in IMG/M
JGI12371J11900_1002926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	1232	Open in IMG/M
JGI12371J11900_1003241	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
JGI12371J11900_1003513	All Organisms → cellular organisms → Bacteria → PVC group	1124	Open in IMG/M
JGI12371J11900_1003660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
JGI12371J11900_1004557	Not Available	974	Open in IMG/M
JGI12371J11900_1004564	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
JGI12371J11900_1004707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
JGI12371J11900_1004741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	953	Open in IMG/M
JGI12371J11900_1005927	Not Available	847	Open in IMG/M
JGI12371J11900_1006058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
JGI12371J11900_1006322	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
JGI12371J11900_1006615	Not Available	796	Open in IMG/M
JGI12371J11900_1006825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus hopiensis	783	Open in IMG/M
JGI12371J11900_1006860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
JGI12371J11900_1007057	Not Available	768	Open in IMG/M
JGI12371J11900_1007638	Not Available	736	Open in IMG/M
JGI12371J11900_1007718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
JGI12371J11900_1007776	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
JGI12371J11900_1008026	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
JGI12371J11900_1008129	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
JGI12371J11900_1008404	Not Available	699	Open in IMG/M
JGI12371J11900_1008779	Not Available	682	Open in IMG/M
JGI12371J11900_1008792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
JGI12371J11900_1008938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
JGI12371J11900_1008978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
JGI12371J11900_1009000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	673	Open in IMG/M
JGI12371J11900_1009179	Not Available	665	Open in IMG/M
JGI12371J11900_1009360	Not Available	659	Open in IMG/M
JGI12371J11900_1009654	Not Available	648	Open in IMG/M
JGI12371J11900_1009673	Not Available	647	Open in IMG/M
JGI12371J11900_1009877	Not Available	640	Open in IMG/M
JGI12371J11900_1009880	Not Available	640	Open in IMG/M
JGI12371J11900_1010555	Not Available	618	Open in IMG/M
JGI12371J11900_1010662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
JGI12371J11900_1010841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
JGI12371J11900_1011653	Not Available	588	Open in IMG/M
JGI12371J11900_1011923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
JGI12371J11900_1012417	Not Available	569	Open in IMG/M
JGI12371J11900_1012650	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
JGI12371J11900_1012811	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
JGI12371J11900_1012960	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
JGI12371J11900_1012970	Not Available	557	Open in IMG/M
JGI12371J11900_1013115	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
JGI12371J11900_1013198	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
JGI12371J11900_1013419	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
JGI12371J11900_1013605	Not Available	543	Open in IMG/M
JGI12371J11900_1013890	Not Available	538	Open in IMG/M
JGI12371J11900_1014541	Not Available	525	Open in IMG/M
JGI12371J11900_1014632	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
JGI12371J11900_1014660	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
JGI12371J11900_1014844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	519	Open in IMG/M
JGI12371J11900_1015475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
JGI12371J11900_1015502	Not Available	508	Open in IMG/M
JGI12371J11900_1015644	Not Available	506	Open in IMG/M
JGI12371J11900_1015950	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI12371J11900_1000162	JGI12371J11900_10001622	F057789	MSETALQFTGTDLRGLLDVLLEALKVIRRTGRRPTITVNGKLYASHDLRKVAALLPDEXLQXHHQALVNVMFAKKXRGYRKTAYNLADRVNSWRTEEQKLAXRQAAKXSALAVAEPAPFRNRGFSERTIRALMDCSIDEPERLLFMQPANLKKIPGVGKASVDEIMRYRAKFIRSSVMKKNP*
JGI12371J11900_1000164	JGI12371J11900_10001642	F005718	MAKRKKRVATVNRKLGISINCRVQKPFLKDLDAYRKPLKLSRPAALVKLATEHLAGLKEPAEKLWEGAVERMFPAASGVKGDDPR*
JGI12371J11900_1000286	JGI12371J11900_10002861	F036023	MKRLFPQCSVLALMLTLALSAVAKPKTENITLYHDARVNGTSLPAGDYVVKYDVEGTNVQLKFMQGNKEVASTTGQVKTLDKMVGSNQVVLNNQDRSIAEIDFRGNGSAITFGSP
JGI12371J11900_1000351	JGI12371J11900_10003513	F034030	MPFDQKGRRMRRREFILLGAYVIAGCVAAVTSADLALAQAKNSTSMEDRLSAKIRCQDFQKNSDGKWTSSSKAKIGKIDFSNHTFGVDEVDIGGXDLATFLNRKCAAH*
JGI12371J11900_1000442	JGI12371J11900_10004421	F104209	HADEGTHAHSTLSAETTHVQVFYRFHPLYSSTLQILRRPKRGDGAVCVSDPMGRRLKIPMWMLLPNSAEMKIAEQAYLSKEALLSLVLLVSTPREIENRVHANLLQAVVDTCKGGQRATTTTPGAGDRKSGGHGADRRRDTNRTDRSHGPHSGGGLSNGRRKSR*
JGI12371J11900_1000487	JGI12371J11900_10004872	F083637	MKKVLVILCSVIVSASLAGCVAGKAPWIGKGKAPAPVVTKG*
JGI12371J11900_1001192	JGI12371J11900_10011921	F075781	RPTEERFLLRVDGQTKRSFSSKEAAATAGAAVKKAYPIVMVTIVDTEDGTSEIIKP*
JGI12371J11900_1001197	JGI12371J11900_10011971	F058548	LCQIAPKYDPLFAAKNDPFDGAETGGAEAHIAEQSRSWRAASGERAVMRGS*
JGI12371J11900_1001279	JGI12371J11900_10012791	F012657	MAERDDPQVAPETFRLPEAFHDRFREKILLYREANILLVLMDRVNPSRDGRDPLFEPVFWEYERIVFWELPRIFGESFNPDRAARRQSVAVALRDLNVRMHPPIGNRYDFALSWSRNWFAGIGHNEINPATLARFSSFWSSEYTAVQKVLDAAVKTSRRLIDFTFIKRRILNLWSGG*
JGI12371J11900_1001298	JGI12371J11900_10012981	F081851	LRRNAYHTTAWIDTDATKLGLLVAIPELGGLWEIVEIYSYRLTRKQLKTRKTLTVIF*
JGI12371J11900_1001499	JGI12371J11900_10014993	F065335	MASILTVRIIDPTLVATVSTPHECAYCRSLIVSGERWVREKIYAPYTENGPHYRRYHADLFHDEGLSCWEKHEMELEIARTARTADRIM*
JGI12371J11900_1001580	JGI12371J11900_10015803	F048473	TVSHQVPDVAIWIIRAVKYSLQMFIFGALLPVIVWSIAASEINRSSFRVRLVEDWARYFLLFASGALFFIAASRLPNSIISSSEHESELTTRHEGGFWICPFLGRCGPPGTPGLGTWEK*
JGI12371J11900_1001807	JGI12371J11900_10018071	F013118	LVKLSDQLNEALAQFRANPKGSASAEDTDHRLAPVGALR*
JGI12371J11900_1002172	JGI12371J11900_10021722	F091102	MKQWKLLPLICGAWVVTWYPSWAIEKRFLEIPGPHDSIVTFDLDTVQIIQPGRFTVVSTEIDNPEVMQFRLNVLEHLRTHCAHAEGKYPAPPELFTLGRPDIAVGDIEVAHVSGSKFVRWFYPYRLLSPTLENYEILFCDGESNYFEMRTLIANGSRHKDVYDCRRGLYGMMHDENDPTSALLIVVPEGSYLFDYYVAVCRALTHEEPYLPQKH*
JGI12371J11900_1002488	JGI12371J11900_10024882	F083188	MAFCEGVPKRLFATSIAIAIAVCMMGALAAAQTTLQPRAEXXGGYSWLNPDGYVDWGKVNSIAHGWNASSTFYLPQARNLGIVVDGSGHYNGQQSNVGL
JGI12371J11900_1002623	JGI12371J11900_10026232	F036023	MKRLFAQCSVLALMLTLALSAVAKPKSGNITLYHDASVNGTSLPAGDYVVKYDVEGTTVQLTFMQGNKEVASTTGQVKTLPKKVSSNQVVLNNENRSIAEIDFGGKDSAITFDSPNPVSVE*
JGI12371J11900_1002724	JGI12371J11900_10027242	F078037	MDAKVSAVILVTAFTASAALAQGPSTEKLKADAQEVVKIISSDSAKAQAYCETIKLGDQMDQAEQNNDSDKAEGLSKKMDELNQKLGPEYLKLGQDLQDIDPNSPDGLELGRTLAALDKLCK*
JGI12371J11900_1002782	JGI12371J11900_10027822	F001736	MPEGYRWPHHHERVQTVERMKRARAAERDALATVRRFNAKLTTKRAVWFWPKISAAITARHPWVVIACDSCDSLTDIDLRVKPRDPESSIRVVLRDVRCPRCNGHGRPRIVGLARQPSI*
JGI12371J11900_1002809	JGI12371J11900_10028092	F012657	MASGNARTTAVRAFSDRGVRMIATAWLKNIEKKRLLSASPDMIAASLHQMAEKYDPQVAPTTLRLPEAVHGCFREKLFLYREANVLLALVDRVNPSSDGRDPLFEPVFWEYERIIFRESSEHFGGLSDHPILRAARRQSVTAALRDLNFRMHPPRFNKRGFTVDWSRNWFAGIGHNEINPATLAWFSEFWSHEYTAVQQALDATVTTGRSVA*
JGI12371J11900_1002926	JGI12371J11900_10029263	F098285	ILVITAVPVCAQAQKPDAAKVTNADAQKVLKIISGDKAKTQTYCDILNLGVQIEEADQSKDAKKADELIQKIDELTKKLGPEYLALVDGLQDVDMESEDGQQIGLVLEALDRLCAK*
JGI12371J11900_1003241	JGI12371J11900_10032412	F004161	VTDLLTGVPTCIEHERLAFALLEVRMRGQYLTRLRSLSREERAEWDRRERAALASLVDHDLEHGCSR*
JGI12371J11900_1003513	JGI12371J11900_10035132	F043066	MTISEQPKYEPGRPIARFCCGEPMRLIKVVPRIGSYPELQTYRCNRCHNVETIEMKWEGSQPRRLS*
JGI12371J11900_1003660	JGI12371J11900_10036603	F008634	MYGKGPELEIGNATSAILISLLRKLADKDILSNTEIRSLLTEAASDLGPHEYTAPVKGAIGIILDDILPQ
JGI12371J11900_1004011	JGI12371J11900_10040111	F014866	FASSSSGAAAATAPALKPIETPAPAPVATQPEVVVSGLTSEQVAEIKSSIQATQKFIGELLEHASRWELEGAELRIYFPPEKSTFAGLIEGRDTTEKIRTSSNKVLGRAVRVCAKLDSGAVNDANASSRAATTQEMRAQFENDPVVKSMLQRFGGRISEVRRRTGD*
JGI12371J11900_1004557	JGI12371J11900_10045572	F098285	MIAAILVIAAVPVCAQAQKPSAAKVTNADAQKVLKIISGDKAKTQTYCDILNLGVQIEEADQSKDAKKADELIQKIDDLTKKLGPEYVALVGGLQDVDMESEDGQQIGSVLEALDRLCAK
JGI12371J11900_1004564	JGI12371J11900_10045642	F066972	VRSAILIFLAILVSATTPARAQGTWLETRMTRAICSSEATPVANTDRLARRLNLTEPQKAALKDLTDASASAHASAKKSLCEAKALLETDEVA*
JGI12371J11900_1004707	JGI12371J11900_10047072	F000442	MLFAIVSRGKKVGTRLLPHRFKDNRYHVQLGKGGPYIPVSDYREIPSYLANGYSLQMSSKAENRAPSLICPQSIHGWSAEARDLFFPAKLD*
JGI12371J11900_1004741	JGI12371J11900_10047411	F044218	VKTSVVIAVLFAACAAQSQNLKLVTVRFGANGPSPNSIQFLCSEKYDKAECVKEATAVRQVLATYPTELLGAWSFVLVPADDWKALVRGQGGDPVSPAFSMLDQRVTLLDGSLFVASANRNKELLQHFAKLGPALVDLAIAHEMGHAICQETNERRADDYGKELREGKIPDCSKTPGHQAVAVAQNPE*
JGI12371J11900_1005927	JGI12371J11900_10059273	F069634	VKVGIHSPNKPRVVVSLLLAILALIGYYVDSSFAFVIAMFAYIVGALGVLVEI*
JGI12371J11900_1006058	JGI12371J11900_10060581	F104533	RSNPLIPIRPRSRVARYIRTQVLVYESDVVRGNIIYGAFDLFRMGIHSLRHRHDPNGGEYDDGLPLSPVSPETLFPQNQPGEIPLTR*
JGI12371J11900_1006322	JGI12371J11900_10063222	F001121	LTAISSNTCSLAGNPISLTRPVSGTLVADICLFSQAGFDTSMSYTISGPGDVNVISKQPAGLGIIHLTLQIPATAAPGERTLFIQNVNLDRTAASGVLRIE*
JGI12371J11900_1006615	JGI12371J11900_10066152	F057631	MSQSDTKGDSLMRMADNHSASGPTDTRYRALLDVSRTMVEQPTVKAVLHSFRAVLSSGCRLHGAHLYVLGSDGESLHLIEFDRDADSPEIKIG
JGI12371J11900_1006825	JGI12371J11900_10068251	F057789	MAVPRPPIRGGLMSATSAYAGTTIAIPTAVREEMSETALQFTGTDLRGLLDVLLEALKVIRRTGRRPTITINGKLYANHDLRKVAALLPDEDLQPHHQAAADVMFAKKQFGYRRTAYNIAERINSWRTEEQKQVALKAGRTSALPVLEPFPFRHRGFSERTIRALMDCSIDAPERLLFMKPADLKKIPGLGKASVDEIMRYRAKFI
JGI12371J11900_1006860	JGI12371J11900_10068602	F045257	MKRYPCFIAALSMCFFASMGAACAEVKADTGGIAIGGSVTGSTLNIGIPQQKVDELVRDAKRPLEELTAQQRDNILLLKEKLDI
JGI12371J11900_1007057	JGI12371J11900_10070573	F058767	MSNRDRAAALREAPELPEKIEDWQRQIKVERTLNDLVEDIHRILVNESKEYRAYLRAVYDQHAIEGSLAADNVFACMLIRKKAKEIGSTEVGDEKVGIINLALGVVLRRYHASRKQRRNMLGGEVVPSDNDE*
JGI12371J11900_1007638	JGI12371J11900_10076381	F063348	MTLSSVRQAEIEDLALRFRDEVKAEILKHRGSNAVGVVGSFVVNIEAHRARYAKKLDAIRAGADAATVFLADEVGREIDALATKEIKRVRDAGRVEFEPGAADHQIPLEIHKIGLSDNQLEVIMRTAEPLAEEKCQEFLQRVAAILPMRGQISDDDVSVAVHRALSDIIRNSAVWKEWNQNSPPTLQDGQVSDAA*
JGI12371J11900_1007718	JGI12371J11900_10077182	F014766	MYAYRGASMRKQFVLDKRTNQLLEELASYRGGNRSQVIREAIQVFADMEERLDRMEAGADFQGMMARSEADIRAGRVIAHEEVVQRSRAKVRKDRKR*
JGI12371J11900_1007776	JGI12371J11900_10077762	F087577	MDQDTFAPRHIEDVEIQEWLESLDSVLLSSGPDVAREILERL
JGI12371J11900_1008026	JGI12371J11900_10080261	F079007	EFLDCSPSYVVMEALKLVYHKDREFQSWLSDQHTKTXEXITXGXSFXLELK*
JGI12371J11900_1008129	JGI12371J11900_10081292	F013922	MADANEPWMREWMKSVADDMMREYSYMEVNLRGTELVSVSLTEVGASCASLLDENI*
JGI12371J11900_1008404	JGI12371J11900_10084041	F083197	MNKYAFLTEPVRHGTEITESYGRFAAANAKHCEPRTPQVVNRYRSPLQDKSFSLTVRADDGSTLLEVHVESMHQAFQTLIDWSIDETGQDACAVITGSNGFYTNHRIKASRDFDWIEN
JGI12371J11900_1008475	JGI12371J11900_10084752	F021652	LAAGNNRKRFAVFYRQIGNTALRLIGRDPHRLQITRVGNRDKPHAMKKYAAPLTLALACIAYGLAVVCVFYFVAQAQGATDVCNTDCFMQKMDALNQKTQALAHTVGELEIQINKSIKTGQTVTLHTQAGHAGGCLTYIGPSGDQGGFVAWSVNCSRGTLWTIN*
JGI12371J11900_1008779	JGI12371J11900_10087792	F074315	MSTDFTEQWKKMQEMFLASSEMSASFRESARRFWENQGKLLDNMQALANGW
JGI12371J11900_1008792	JGI12371J11900_10087921	F006520	VSIVTISETAVALLGLILDRIYPALSLPISLSLFFVVLWLAWIVAVRLTEPKHAKAHKA*
JGI12371J11900_1008938	JGI12371J11900_10089381	F002989	MARFQAEEPNGVAVQQLEVLVRTAVFKSANLLVGWLLQKAADQIDGAYQPQPGQHYKGRIGSQIEGMFGSFPLERDYYYHEGKRQGHYPADAALGLE
JGI12371J11900_1008938	JGI12371J11900_10089382	F001490	MKQSDPSQLLQQIAQIQRMEPGKLCVLRQGPNGPYYNLQCRENGKTLSRYVPGDQVQMVAEHTANYQKFQLLVGQYAQLIIEQTRAERNEGLKKKTSPPRSSWPKSRKSGS*
JGI12371J11900_1008978	JGI12371J11900_10089782	F075781	TDERYLLRVDGQTKRSFSSKEPAITAGAAIKKAFPLVMVTVLDSKDGSIEIINA*
JGI12371J11900_1009000	JGI12371J11900_10090001	F012135	MLNEVIARFRKFLGKAREGHGLHAPFRVTTRRGHTMQTFQSLELAIEAAESLGPDHYVIDRHGLQIWNPQRKLLRNEE*
JGI12371J11900_1009179	JGI12371J11900_10091791	F022968	ATLAYVVSEGRLFALTPSEWSILLVGGALCRFVEQLF*
JGI12371J11900_1009360	JGI12371J11900_10093601	F016419	MAVTGLANLAVKVADLEAACAWYGAAGATVSEPVEWENGRRADVQLGALSLPLFT
JGI12371J11900_1009654	JGI12371J11900_10096542	F015758	MNEARSATKTMMAQSAKSELKGRIRKIRLEESLVDMACDLCMEQVPIELAFQQIQDRAMEKMVPLLDTKILDQADIVQSCLEMVAEESERVAWSALRKGTELLEEGLAILEEGKIELPRDGYVN*
JGI12371J11900_1009673	JGI12371J11900_10096731	F096474	MKVIRVFVAILVVCVLSGPLLLAQDKPKASNNSPAASLKLQVTIVEREGDKKVANLPYTFFLRAGDGGGNSPWTKLRSGSRVPVYVGKEHGMQYIDVGTNIDARGVIAEDGRFDITLNLERSWVSGEVEVPIDKSDGAVADSGSTHFKEPIIRQFKTELTIPMRDGQTSEITQAADPGSGRILTITV
JGI12371J11900_1009877	JGI12371J11900_10098771	F103827	ISCLTVAGTATHQQTGIEPGNGLGISIAPDEAASGPDKAMHVKVTFSNLRSEDLTFIPGTLIACGMTPSKTSAVKLNLTGPQGKQHRHLPYLGDGPPYQGWCAGQIDFYVVILHGGESVSLPLEIGKYVDLSDSKQYVGARFPAGKYSLQAELTTEPSEIPKSMLKTKNVWAGRATSNTVQVQFASEFFAPMDDYSK*
JGI12371J11900_1009880	JGI12371J11900_10098802	F094701	LLLVVLSAASPLAFAQRPAGIHIDWTIVLSGPAYDGMAPIGNSDYEVLNTYRRFEADCDQVNVPDGTLLDVHVNGKHVGSFHSLDQGGALVLTGKRAPNVTKGTKVSISIHNGPTIVSGHY*
JGI12371J11900_1010555	JGI12371J11900_10105551	F028026	MKSKSLLANLVLCGALAAAVPLFAKPMSTNVPIGHSVKVGQTDLKAGDYRFLIDGNHLTVFIGRKNVAEADGKWEERDTKAPYTEVVSNSDGKLLELRFEGKKSVFVLNQ*
JGI12371J11900_1010662	JGI12371J11900_10106621	F039846	YSKEQAGKRGASSRPTRLAGSATYDKMSADERQQLVEELAGLAGLQEGPKDALPDGTRYEYDSRFKTTFEIPPSGKRFPVALVAGRFQRDLATATARKAAR*
JGI12371J11900_1010841	JGI12371J11900_10108412	F004609	MKRPTLFHVLLATTLSVMLISSALARQGTKMDPNAKTMTIEGAVRDLACPVQNPDGTATNFDLKCTLDCVKHGSPIIILTKDGLIYFPISADMPDSDQREKMMPFVGKYVQVTGAVFERKGTRAIAITQIKEIKNVHPDTGG
JGI12371J11900_1011653	JGI12371J11900_10116531	F053923	QESSVVNVLAEAGQATHPGRSMKRTLQPRYATHLVRSCGICGRRAGANSAKTEPAVKASLNATAGTTGVRVTAWSEWIGGINWGPSAVGGSDPQPGGIIHKPLGGRQRRRCGHSKRRTFRKIQPEGEPRATGPAVVVRSPRCRLVARPTTDKTPGAETPTVTAYKQAPTRPRRWPWHQVGLKPYWGKPAVRNFRG
JGI12371J11900_1011760	JGI12371J11900_10117601	F000136	MAKSKLRILYGEGDSDVLSSQAAAMEKAGHIVQQAEGRKAVDEALKKTSFDLVVLGATLTRNDRHHLPYMVKKANSETSVLVMHADGSRHPYVDACTDTGASLENVLNRIEAMNIA
JGI12371J11900_1011923	JGI12371J11900_10119231	F068021	MQCPSCGIRINIDTDRLANAADEIRKAIGKVPPEVTIKFFR*
JGI12371J11900_1012235	JGI12371J11900_10122352	F044217	RGDRPAEETAANPPQGLSEKEQELQTALDEILRKNKPALGPVLEKFYGLAGPFPSPFAVALVSRLGLTEACPLLMRTYLTVHENVKASPEYKNVADAVEKLGCRGRPIPSQP*
JGI12371J11900_1012417	JGI12371J11900_10124171	F076808	PNNSAG*PRPEPQRLARMLLGSPENFSENGARPVQILGPQGRLIGWARSFSDFMTVTDNTIVGARPQGRLTRIAGRDVSKSDGHTVGKTFSRKELLGCPRQPSPARSAPSASIHFLASPPDRHQSVDPRSPLMHKSSYPENGARETGLGQVLPGFLRSNQSNRPSPQSILMPQENTKSKKPVDASHS
JGI12371J11900_1012650	JGI12371J11900_10126501	F039255	TCMVADPSIYKTQGDKITVTPTPGTAEAFQKAIDLDPNGPIGAQAKQGLEQLNQLTGGIETKIGSSKKKKP*
JGI12371J11900_1012811	JGI12371J11900_10128111	F012638	EGREQTESEPGVYRWREISQGGLSQIELDALSPKVMTLHRLTLRRTS*
JGI12371J11900_1012960	JGI12371J11900_10129601	F000643	MSLGIPMAAMYTFYRVRKLRTEERIAALARGVNVPMEPELSQVARSRRYGILFTAGAIGY
JGI12371J11900_1012970	JGI12371J11900_10129701	F078037	TATMASAALAQGPSTEKLKAEVQKVLKIISSDSANVQAYCETIRLSYQVDQALQKNDADKAVGLSKKIDELNEKIGPEYLKLGQDLQNIDPNSPDGQEIGRTLDALDKVCN*
JGI12371J11900_1013115	JGI12371J11900_10131151	F001463	MSAVAEGELLMYAVEKMPPMIEDLRNHTPEQLSELRILLNSGFLGRPDLRRPGFYEIDGAFNVYYVFRYPSGHKILLVAAWQKELDPVAEMVACGRTAA*
JGI12371J11900_1013198	JGI12371J11900_10131981	F068169	LGPAKDSWRQEHGYEGRRPGDPAWNASRYAVFRYFAAQVDAGAAQELEKQMQAVSTEMSKLNPDRVVAANVALAAEATAQKLAQRLATMTYDRGIALKTMQAFSENAETIALGDERAAEQATMGMDSLYIAYSKDAKPANDVEIRGAINALFQQLENPSAYNADQFAAALRRIGALLH*
JGI12371J11900_1013419	JGI12371J11900_10134192	F018757	MAVTIEIPTAFRRFTDGEQHVSSGAATVSEALNDLTARFP
JGI12371J11900_1013605	JGI12371J11900_10136052	F053447	MAKRSSFVEMKAEQDRLTQSWRAEGRLSEAWVVADPEIVEIFSAGVSFGQETARRGDGSFSQDEWRKAL
JGI12371J11900_1013890	JGI12371J11900_10138901	F064047	MTLMKSPRAGLLALAFGVVLSLFLSVAAFDASYAQAP
JGI12371J11900_1014541	JGI12371J11900_10145412	F045732	MHRRRRVCIEAPKGPISAGFTVPETADAADVAMKLRKGGWEPYRIRLEREQNVWIAIVIYWKRAA*
JGI12371J11900_1014632	JGI12371J11900_10146322	F019874	GAVSLARKIFAPTESGDSFQKKYFDAIQNDPAVVMEHAELVRLFNNEPGDREAE*
JGI12371J11900_1014660	JGI12371J11900_10146602	F065038	EPPEELLPSARAHARLRYAKILRLAGQEVATRNKATLEEVLNGGKES*
JGI12371J11900_1014844	JGI12371J11900_10148442	F072153	EEVEIRTGRERIAMHCKAQRKHSVLTFPLHHQGIPLGARRAESKILIHLRQSAPEVEKRSLAAYERVANGGGR*
JGI12371J11900_1015255	JGI12371J11900_10152551	F000945	SKTVTGTIGSSWGKSRIQIRELSLGGGMGTKEDNLRIGSEADLEISLGMRAKIRAHVLLRRARVNEVGFEIVNTDLESRYRLRRLLVDALNNVPQGKGQEWGGERKV*
JGI12371J11900_1015475	JGI12371J11900_10154751	F013709	VKDLLGNAVVLKQTSIDGKFDLVILQKGKHSFLSFVKHSRWEFVHDRPAKGKLMNLRAKFENGEEKHIEWDELGFATADLYSVLWSYPAKTDALIGPAVEGDHGDSVGGDELFVQDMMKHTAMLLEVEPGVTTQFNVTGLAREIDKARTPKPRAVLEAQQTPE*
JGI12371J11900_1015502	JGI12371J11900_10155021	F014533	MSKKDTRRKWMWLFLAVIASLQIYAVRELLAAFALFVLGFGSIAVCVAALYLAQKTWEAGVARAVVSQNPLILAARRSVAALEDWSRR
JGI12371J11900_1015644	JGI12371J11900_10156441	F035091	MTDAKSYWHVVVFRCVHCGKNEAFAEESSAVEPREEQVRRKTYQAICRHCGWQGEARGISAIEM
JGI12371J11900_1015880	JGI12371J11900_10158802	F033561	MSGQVVLYFEDQADALRFALAAGSVMAGEGAKFTEELVAETT
JGI12371J11900_1015950	JGI12371J11900_10159501	F086229	MESRPNRSSPKPTNLHPWRTAILVCFVAILSYSAARVGTMLAMGPQADWPLWLGNVLLASILLLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000729: Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences