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Sample 3300000591
3300000591: Groundwater microbial communities from well in New Jersey, USA, that are chlorine contaminated, sample 1
Overview
| Basic Information |
| IMG/M Taxon OID | 3300000591 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0083744 | Gp0055153 | Ga0011516 |
| Sample Name | Groundwater microbial communities from well in New Jersey, USA, that are chlorine contaminated, sample 1 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | University of California, Berkeley |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 41408347 |
| Sequencing Scaffolds | 1 |
| Novel Protein Genes | 2 |
| Associated Families | 2 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| All Organisms → cellular organisms → Bacteria | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Groundwater Microbial Communities From Well In New Jersey, Usa |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater → Groundwater Microbial Communities From Well In New Jersey, Usa |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | freshwater biome → well → groundwater |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Subsurface (non-saline) |
| Location Information |
| Location | New Jersey, USA |
| Coordinates | Lat. (o) | 39.86 | Long. (o) | -74.34 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F030981 | Metagenome | 183 | Y |
| F096529 | Metagenome | 104 | Y |
Sequences
| Scaffold ID | Protein ID | Family | Sequence |
|---|
| TCEJC06_1000388 | TCEJC06_10003882 | F096529 | VKRKDFIEGFEPQIVRISGKPKVIGYIKGNTFRSVVKYSKHVLYKREGRPPAIAKEAWVYRNLIRPRCRLWEVFDEERNLLLRTTIAKFDAHCEEWHHNDLVQLLLEEPYWQIERLGPPKLTQGKLF* |
| TCEJC06_1000388 | TCEJC06_10003883 | F030981 | MGKVRRCDKRCHTAKGIRCKCWCGGFFHGSAGASNRAALAQGATELLEEHGFKKDATAYVGQEELPMKDLPGAEAR* |
