NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300000494

3300000494: Anaerobic digester microbial communities from Northern Denmark, sample from West Aalborg sludge



Overview

Basic Information
IMG/M Taxon OID3300000494 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0074283 | Gp0054628 | Ga0011571
Sample NameAnaerobic digester microbial communities from Northern Denmark, sample from West Aalborg sludge
Sequencing StatusPermanent Draft
Sequencing CenterAalborg University
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size39999792
Sequencing Scaffolds14
Novel Protein Genes14
Associated Families13

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia2
Not Available5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re11

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameAnaerobic Digester Microbial Communities From Soeholt, Denmark
TypeEngineered
TaxonomyEngineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Anaerobic Digester → Anaerobic Digester Microbial Communities From Soeholt, Denmark

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSoeholt, Denmark
CoordinatesLat. (o)57.045078Long. (o)10.047414Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F010244Metagenome / Metatranscriptome306Y
F016798Metagenome / Metatranscriptome244Y
F033394Metagenome / Metatranscriptome177N
F047640Metagenome / Metatranscriptome149N
F054825Metagenome139Y
F067650Metagenome / Metatranscriptome125N
F075994Metagenome / Metatranscriptome118N
F077200Metagenome / Metatranscriptome117N
F087073Metagenome / Metatranscriptome110Y
F093744Metagenome / Metatranscriptome106Y
F098441Metagenome / Metatranscriptome103N
F101009Metagenome / Metatranscriptome102Y
F101010Metagenome / Metatranscriptome102N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
AAW_1000969All Organisms → cellular organisms → Bacteria3618Open in IMG/M
AAW_1001977All Organisms → cellular organisms → Bacteria4698Open in IMG/M
AAW_1002002All Organisms → cellular organisms → Bacteria1561Open in IMG/M
AAW_1002191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia2895Open in IMG/M
AAW_1002532Not Available1416Open in IMG/M
AAW_1003003Not Available1316Open in IMG/M
AAW_1003136Not Available1056Open in IMG/M
AAW_1003161Not Available1441Open in IMG/M
AAW_1006697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia2665Open in IMG/M
AAW_1007479All Organisms → cellular organisms → Bacteria1019Open in IMG/M
AAW_1008079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1482Open in IMG/M
AAW_1008425Not Available1966Open in IMG/M
AAW_1008820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae1951Open in IMG/M
AAW_1010414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermosediminibacterales → Tepidanaerobacteraceae → Tepidanaerobacter → Tepidanaerobacter acetatoxydans → Tepidanaerobacter acetatoxydans Re11134Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
AAW_1000969AAW_10009696F047640SLWYNNFMLNLEIDFESNLKEKQEKTLKQELSAYLQALKNVHNNKPAETPKIGSFPLILDKYAIERVILLYRLLQHGVLPAYQLILDILRVYTLDATTISDDTKREILAMIHNY
AAW_1001977AAW_10019776F087073MKKIVMIPETLDGRKKTWRKHLGSVDKTKANGYAFVGNWLQAGERAELEVGSFILCYDELGFYWKGGYGERSWALAVRDEIAAILDVQGQESSEEESPLANIPDEELIAELERRGYAVTKIEREE*
AAW_1002002AAW_10020023F016798MKKVIYMLLLLFLVSCEKEFKQLQRSDVIYNFIALNDDLDYKLVYFCDKYDAFEHFYDIKGTILNEIGEHNYYKSAETRMAIVSHTKDTGTCQFQHRTFYYLAEKYDIKGANILSESQQIAIMVQAFRDGKQNLKVINKSKK*
AAW_1002191AAW_10021913F010244MTYKVKFTHSDKSRAHINCAELREGEVIYKHPRGRFVVLEFQGESGKFREAFWPEEIVKAI*
AAW_1002532AAW_10025324F101009MMELLKCAQCGDRPGLLVTVADRAAGTNINLCYECYKKYARHVKNGNAREPVTLVYEEGVSRR*
AAW_1003003AAW_10030031F098441MNFKDFLTTFDTYLEYENLFSSHYYGYVNNVFVEKKLLYPILIYHKDAMNHSILDNSITVLKFNFFVFDKLKTDNSNIIDVQDDLLKKLVKIQSYLKRNFFATNFNITAISDEAYSEKITGWVMDCLIKLDTSEATCIDMRERYLIDGISKYDRQTYTIIECLLPSGSEAVFPNYTYFLDDYRNPVDKITLNIFQNIKFTGDFIMNNLKKINDYEFENSVFQGF
AAW_1003136AAW_10031362F067650MNIKIRFIFRTNIGKKVRLVDETFECLDDNFSINIDNENINDFSKAIDSKFTKTLKLAGTERAVAFFKEYYEIRYEGENDFSFIFNSRTGEHCIIYVDDVEVMSGVALLTGITRNKNLTIFEIQVINDVKYILNEFKNLYIDELDYYGYEWTFANVKNLLNTTVNETFIGIAMADGECVSQKNIGGSYTTAIDISKIPIAANLKKLIDKGFEKIGVQYQSNFLNSDRLKALWLC
AAW_1003161AAW_10031612F033394MKSIYIYFVDEKADIYYKDNSKNLHCTINLYTTNKEIREQFRKNLLKRYWDRLEINDIDDLKMIVKDSFVQIFTLQREKIDKND*
AAW_1006697AAW_10066974F093744MIEKAEGQGWERKEVLRMGFSVGDRVEVNYSVDDFPGHVGIVRDIKESTLLPGKTIVICYWPFLDKEIAFFEESLDLV*
AAW_1007479AAW_10074792F075994MKLPKARITLDLDHDLLEWVMRKVQETKNSRNEVIGQIIRLAKESEENEASMDER*
AAW_1008079AAW_10080792F054825MSTHPTDRNLDLWLIDKDAEGVLKPGPGVVYDRAGLGIVFMDDRGRDFTFIDTGVALEVFAGQGARLTPALARDLAAALERFADYADGLTAYVPTSAAAT*
AAW_1008425AAW_10084254F077200MNKFTVIAVETQPNLKRIEEYANRYGMTLEEALQRKRIGEDYFPIRDQQVVSAGVLNFINKEDKISIIAAVFVGEETRRSSDLAERLEKIIKATGKPFFVTGDGRKYALEILAGRAMYYMIEAKKEDQEITPELQNMIKIITSPKNGYLKPFDTRDSIDIQAAFGLGHDIIPLPEKLQYTNKDLPKLAEDTKRLLLDMTKNYACYIEAQGEKIKP
AAW_1008820AAW_10088202F101010MFIIRDGYATVWSVEDKGNFVRGRISTSEKDKDGKYINSNWFAIFVGKAKEPALALSTKDRIKIISGKISNTTTGEGEDRKSFVNVVIFDFENLSNSQNESNDNFDDLPF*
AAW_1010414AAW_10104144F093744MGFKIGDRVEVNYPIDDFQGHIGIVKKITIDTELIPGKTVVICYWAFLDKEIAFYESSLSVGMI*
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