Sample 3300000266

3300000266: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_09_P20_500

Overview

Basic Information
IMG/M Taxon OID	3300000266 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0052146 \| Ga0026001
Sample Name	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_09_P20_500
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	68022008
Sequencing Scaffolds	52
Novel Protein Genes	54
Associated Families	51

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → Predicted Viral	5
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2
Not Available	40
All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine aphotic zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Pacific Ocean
Coordinates	Lat. (^o)	49.566667	Long. (^o)	-138.666667	Alt. (m)	N/A	Depth (m)	500
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001930	Metagenome	615	Y
F002715	Metagenome / Metatranscriptome	535	Y
F003561	Metagenome	479	Y
F004102	Metagenome / Metatranscriptome	453	Y
F004642	Metagenome / Metatranscriptome	429	Y
F005336	Metagenome / Metatranscriptome	404	Y
F005516	Metagenome	398	Y
F005571	Metagenome / Metatranscriptome	396	Y
F005685	Metagenome / Metatranscriptome	393	Y
F006198	Metagenome / Metatranscriptome	379	Y
F006550	Metagenome / Metatranscriptome	370	N
F006551	Metagenome / Metatranscriptome	370	Y
F007606	Metagenome / Metatranscriptome	348	Y
F007946	Metagenome / Metatranscriptome	342	Y
F012354	Metagenome	281	Y
F017399	Metagenome / Metatranscriptome	241	N
F017906	Metagenome	238	Y
F020372	Metagenome / Metatranscriptome	224	Y
F022427	Metagenome / Metatranscriptome	214	N
F025857	Metagenome / Metatranscriptome	200	Y
F026401	Metagenome	198	N
F027203	Metagenome	195	Y
F028530	Metagenome / Metatranscriptome	191	Y
F029236	Metagenome / Metatranscriptome	189	Y
F029559	Metagenome / Metatranscriptome	188	Y
F029786	Metagenome / Metatranscriptome	187	Y
F031645	Metagenome	182	Y
F034217	Metagenome	175	N
F034336	Metagenome / Metatranscriptome	175	N
F034993	Metagenome	173	Y
F035723	Metagenome	171	Y
F035798	Metagenome / Metatranscriptome	171	Y
F042565	Metagenome / Metatranscriptome	158	Y
F042933	Metagenome / Metatranscriptome	157	Y
F048371	Metagenome	148	Y
F052659	Metagenome / Metatranscriptome	142	N
F052866	Metagenome / Metatranscriptome	142	N
F060053	Metagenome / Metatranscriptome	133	N
F060128	Metagenome / Metatranscriptome	133	Y
F062832	Metagenome / Metatranscriptome	130	N
F064789	Metagenome / Metatranscriptome	128	N
F064804	Metagenome	128	Y
F070936	Metagenome / Metatranscriptome	122	Y
F081441	Metagenome / Metatranscriptome	114	N
F082813	Metagenome	113	Y
F089159	Metagenome	109	Y
F092360	Metagenome / Metatranscriptome	107	Y
F097512	Metagenome / Metatranscriptome	104	Y
F101495	Metagenome / Metatranscriptome	102	Y
F105359	Metagenome	100	N
F105860	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
LP_J_09_P20_500DRAFT_1001639	All Organisms → cellular organisms → Bacteria	3683	Open in IMG/M
LP_J_09_P20_500DRAFT_1003585	All Organisms → Viruses → Predicted Viral	2289	Open in IMG/M
LP_J_09_P20_500DRAFT_1003606	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2279	Open in IMG/M
LP_J_09_P20_500DRAFT_1004626	Not Available	1934	Open in IMG/M
LP_J_09_P20_500DRAFT_1006210	Not Available	1557	Open in IMG/M
LP_J_09_P20_500DRAFT_1006401	Not Available	1531	Open in IMG/M
LP_J_09_P20_500DRAFT_1006423	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1525	Open in IMG/M
LP_J_09_P20_500DRAFT_1006691	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1478	Open in IMG/M
LP_J_09_P20_500DRAFT_1007010	All Organisms → Viruses → Predicted Viral	1430	Open in IMG/M
LP_J_09_P20_500DRAFT_1007439	All Organisms → Viruses → Predicted Viral	1368	Open in IMG/M
LP_J_09_P20_500DRAFT_1007778	All Organisms → Viruses → Predicted Viral	1324	Open in IMG/M
LP_J_09_P20_500DRAFT_1009034	Not Available	1183	Open in IMG/M
LP_J_09_P20_500DRAFT_1009990	Not Available	1098	Open in IMG/M
LP_J_09_P20_500DRAFT_1010225	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
LP_J_09_P20_500DRAFT_1010988	Not Available	1022	Open in IMG/M
LP_J_09_P20_500DRAFT_1011403	Not Available	995	Open in IMG/M
LP_J_09_P20_500DRAFT_1011799	Not Available	970	Open in IMG/M
LP_J_09_P20_500DRAFT_1012585	Not Available	923	Open in IMG/M
LP_J_09_P20_500DRAFT_1013489	Not Available	875	Open in IMG/M
LP_J_09_P20_500DRAFT_1016076	Not Available	771	Open in IMG/M
LP_J_09_P20_500DRAFT_1017271	Not Available	730	Open in IMG/M
LP_J_09_P20_500DRAFT_1017636	Not Available	720	Open in IMG/M
LP_J_09_P20_500DRAFT_1017861	Not Available	713	Open in IMG/M
LP_J_09_P20_500DRAFT_1017922	Not Available	711	Open in IMG/M
LP_J_09_P20_500DRAFT_1018996	Not Available	683	Open in IMG/M
LP_J_09_P20_500DRAFT_1019077	Not Available	681	Open in IMG/M
LP_J_09_P20_500DRAFT_1019809	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	663	Open in IMG/M
LP_J_09_P20_500DRAFT_1019823	Not Available	662	Open in IMG/M
LP_J_09_P20_500DRAFT_1020026	Not Available	658	Open in IMG/M
LP_J_09_P20_500DRAFT_1020073	Not Available	657	Open in IMG/M
LP_J_09_P20_500DRAFT_1020400	Not Available	649	Open in IMG/M
LP_J_09_P20_500DRAFT_1020712	Not Available	642	Open in IMG/M
LP_J_09_P20_500DRAFT_1021994	Not Available	615	Open in IMG/M
LP_J_09_P20_500DRAFT_1022209	Not Available	610	Open in IMG/M
LP_J_09_P20_500DRAFT_1023000	Not Available	597	Open in IMG/M
LP_J_09_P20_500DRAFT_1023196	Not Available	594	Open in IMG/M
LP_J_09_P20_500DRAFT_1023764	Not Available	584	Open in IMG/M
LP_J_09_P20_500DRAFT_1023770	Not Available	584	Open in IMG/M
LP_J_09_P20_500DRAFT_1024565	Not Available	570	Open in IMG/M
LP_J_09_P20_500DRAFT_1024933	Not Available	565	Open in IMG/M
LP_J_09_P20_500DRAFT_1025067	Not Available	562	Open in IMG/M
LP_J_09_P20_500DRAFT_1025469	Not Available	556	Open in IMG/M
LP_J_09_P20_500DRAFT_1026091	Not Available	547	Open in IMG/M
LP_J_09_P20_500DRAFT_1026201	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
LP_J_09_P20_500DRAFT_1026624	Not Available	540	Open in IMG/M
LP_J_09_P20_500DRAFT_1026957	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	536	Open in IMG/M
LP_J_09_P20_500DRAFT_1027156	Not Available	533	Open in IMG/M
LP_J_09_P20_500DRAFT_1027493	Not Available	529	Open in IMG/M
LP_J_09_P20_500DRAFT_1028167	Not Available	521	Open in IMG/M
LP_J_09_P20_500DRAFT_1028181	Not Available	521	Open in IMG/M
LP_J_09_P20_500DRAFT_1029400	Not Available	506	Open in IMG/M
LP_J_09_P20_500DRAFT_1029568	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
LP_J_09_P20_500DRAFT_1001639	LP_J_09_P20_500DRAFT_10016394	F029236	LNKAFLSSDHATSCIDHMEMKDNSDFMNDAKKMIEEWLASSQAWFELESARLRLEAETMVWEAENNVFSLEAGCYDWEFIDEWV*
LP_J_09_P20_500DRAFT_1003585	LP_J_09_P20_500DRAFT_10035853	F006198	MEVELDVDCNNCNAKYTMMYEADDIQSRQEEHAFHCSFCGILMEPYYDEFFEED*
LP_J_09_P20_500DRAFT_1003606	LP_J_09_P20_500DRAFT_10036067	F027203	PSQGSLLNDFVTTAPAPARYNRSKILSDIPKIPEARIVGLSRVNVPIEVERLTVTLNSLIIFSYNS*
LP_J_09_P20_500DRAFT_1004626	LP_J_09_P20_500DRAFT_10046262	F052659	MLLSGNPGTETRSAVFIDGGSSVPLELNYQXIDKLQQGGVPDKVSWMKPSLRGRLRLVKLKAQERNLTIEDLNQSIHSKWVIFWAEV*
LP_J_09_P20_500DRAFT_1006210	LP_J_09_P20_500DRAFT_10062103	F025857	MTLHRIAPGCTFESEDDVVMNPVIGRKKSVAVKSPKPYYRTSELDDIPDNFVERMKKXXRVXVRKEEREVITPDGFAVSIAYNKSGYQF*
LP_J_09_P20_500DRAFT_1006401	LP_J_09_P20_500DRAFT_10064011	F060053	ESISKGQVCELVSGYLKKSPTTATVDVNHFVALEAVDNSSGSAGDLSAPVAVSGHYVTVVADGVIRPGARLQISASTAGQVITTGGGGNKQIGWYTGKEGGIISKDASTPFQETFTDNSDFPPVACADGDIIEIYLGL*
LP_J_09_P20_500DRAFT_1006401	LP_J_09_P20_500DRAFT_10064012	F006550	MQARINKREIDYKGQQLWLNPVDKTVYATDGAPTYSFGEVNGTPIYNYDSHFDAVKTAKDKLGTSYYHDAFVDPEFKSLAEDYVSDVKSGGRQRQAALRSSVNSAVDIVNVWETVLGKRDRVYAGKNLAKEIAVPNLLISIDTVTKFTGLEKLDEGMRARVKELPYTRANFTAEKFGLKFIIHEEARLKNVHNVLQDSIQVASTKIEQRQSYDVINVVETNTAQAAIAAWDTFVSSTTQSTGDPTIDIGIASLNIEGTGVGGKLNRVGMHQLTYAKFTGNTFLRGVASIGPRDYSYEAGTSELVGIPGIGLVLDNGIKQGDVHCVDTELEPNCALFQGPQRVGSQHDEETGDDKYFIIDYHLAAKI
LP_J_09_P20_500DRAFT_1006423	LP_J_09_P20_500DRAFT_10064231	F022427	HAVFNTDGTILGQTSSGLAGAGGTYDIDQTSTGTINLDVNGASANVSIEQTSTGTVHIDAAGSAFTADIDQDNASTISLHHDGASADYVILQTGGSGDILTLTVNGASANVDIIQRD*
LP_J_09_P20_500DRAFT_1006691	LP_J_09_P20_500DRAFT_10066911	F002715	MPEEELQSVKLEVGLLKNEVEVRGKQIETLLSKLDLTADKLQELTVQIIKLNTRQEDYLRHTSNMTDEFKILHTRIGDLHDKQLASQKEIEVRLXRLDQYKSKLMGMIIVVG
LP_J_09_P20_500DRAFT_1007010	LP_J_09_P20_500DRAFT_10070101	F042933	DKIMVVERDINGVEFAYENKDVLAFEPDPNQREPNEVDEPTE*
LP_J_09_P20_500DRAFT_1007439	LP_J_09_P20_500DRAFT_10074391	F070936	MNKKPVNVTAALRDMREAQELKEKWNEKMSIKGLGEFRKAYETLKKSGVDKRFVASMEKFYDDLVIGGLYSSRSAEDAGIVRIDG
LP_J_09_P20_500DRAFT_1007778	LP_J_09_P20_500DRAFT_10077782	F004102	MGFKRTMGTVLNNFRNITKGYTETTTRPSVAQPYMSTDTGAKLPIFPFPLIMIYELADNIDALRIPIETLNREMFKNGFEVVEKFKFKCANCGKEFQYKPTKNDLKDEQPFEQNQDNETSQLPRSNAKKANTTGIATELNQEQDMECDTCGSNDLIRPVPENRKLLEDLLESPINGNNQTLEDLARQLERDLEIADNAYCLVLKNYKIDDRTGKIDRENSEIKEFLRIDPPQVALIADSDGRIGFDDKRNAIFVCPRFEHRDKRLTEPICDRCGAEALKAVLEVNSVYSIGIFHNQRELSMVKVKLFGKQVNTNHHCFMDTVLSMQYGQRLWH*
LP_J_09_P20_500DRAFT_1009034	LP_J_09_P20_500DRAFT_10090341	F005516	MKSFKGYLNEFVIQSTSDYVFDTMSNSISDIKIPISGPMFKRIWPDTIRATVFHSTDTEHLAGLKKLEGKKKSISAFFSMMSTQMEGGIATDGGVVVEMEADVLISAKDDIMSAVDKGGRRWVEMSWFENAQGRGNPVGFDKVEQGFNTLIKNLVKKHLPSPPL
LP_J_09_P20_500DRAFT_1009034	LP_J_09_P20_500DRAFT_10090342	F005336	MDAGTMEHGIQGGGGVVVELDANIIMSGKGDLMSMPDKTGRRWVELYNIDPKENMHVELEKMLIDLAIKHDPKNKEYLETVPEIGIGVWYKLQTDFKDDGKKISLIIADYIDGVNAILKKHKKDIQGVVHGYYVRRGAVAVKHPSGRMVGGDSAIKEWNVYDEQVVDKIKIIKVHTFNTKTRETDWLAKSVIPRLGKIPHRHWVGGATELSTYVSQVAEAEVRSIGRSKR*
LP_J_09_P20_500DRAFT_1009990	LP_J_09_P20_500DRAFT_10099902	F097512	RPGSAPETVDKSFTKDFSPILKDARANGFEGLSIVAQNILSGKYYKPTPEEIGGF*
LP_J_09_P20_500DRAFT_1010225	LP_J_09_P20_500DRAFT_10102252	F001930	ELMQSFQQHLKQHLKEGVAWQQSTSKMIFDFGQTGNMKIPLSSKMMTWIFNVQLPRVTVFHVTNGVGLGNLKKLQNKKKSISAFFNMNADYIDQGIKTEGGVVAELDANILMSSKNDILSMPDKAGRRWVELHNIDTDEKMHPEFEKMVIDLAIKHDPRNKEYLKTVPEIGIGVWYKLQTDLLTKFDPAKAGKKMSLVIADYIDGVAAILKKHKNDIQGKVHGYIVRRGTLAVKHPSGRMVGGDSELSEWNAWDEQVVNEIKIEKIHTFNTAKREADWVKDSVIPRLGRIPHKHWKSAEELSTYITQVADAEVRTFGGWARKQ*
LP_J_09_P20_500DRAFT_1010988	LP_J_09_P20_500DRAFT_10109881	F007946	DAQKSNNVFNSIMHDKILNALDSQKQEVASQMYGASNNDTPVAEEPAAETVAGEEATDVDV*
LP_J_09_P20_500DRAFT_1011403	LP_J_09_P20_500DRAFT_10114031	F042565	PEMDVKDFNRIELLVNKRVRWEIGSEGMAIWNACGYKDIPTLAKAYGIK*
LP_J_09_P20_500DRAFT_1011799	LP_J_09_P20_500DRAFT_10117993	F034336	MKINVKVFSAFLLIVNLYSVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKALLTIPMGVEIERILSIVHQFLKDNPENLYKPSIALIRQSLLRAFDQ
LP_J_09_P20_500DRAFT_1012585	LP_J_09_P20_500DRAFT_10125851	F007606	MGLAISLILNSCAKNTVDKNNDLGSGDKSNLPVTLESLIEHAEYCKAIYDSGGDQKDEVAFEVKQESGISIIVIRGTANDANVLSDIDVRLVSDTRTGILLHKGFRDVAV
LP_J_09_P20_500DRAFT_1013489	LP_J_09_P20_500DRAFT_10134892	F029786	MSNYDMDEIERQREREKRSRGIIPEIGKDEEPWVSVGIEVKDEDFLKIAQEAHARDITFNKMINIILKTGIKDAEYKFEHDSRPQLLNEIGEPFKS*
LP_J_09_P20_500DRAFT_1016076	LP_J_09_P20_500DRAFT_10160761	F105860	SGTPLNKTVTITNLANTVANQNKTGNTVQSNVDGVDTVFKQYDGTEVARIYDGAVVPTVSGTTYTLSAGTGFGFRRRILTLSAGGGNNLTLTAADSGSIIYVTPTEPVDLILPLVGTETGLWFDIIFAAKVNKAFEIKTSGQDGNDNITVMNQYVGPSQNFDVGGSDHDVLYIANANIGTRIEIINCAGGAAEKWHAYVRSLGSQAATIS*
LP_J_09_P20_500DRAFT_1017271	LP_J_09_P20_500DRAFT_10172711	F005571	MIKSLEERIVNLTKVTTDNVETTVEAELRQLEMKGGVPIQVSVVLAKEDDFQFTMDWNSTMSKFSTTLDGIKWYSDFDYSLYSPKLWET
LP_J_09_P20_500DRAFT_1017636	LP_J_09_P20_500DRAFT_10176362	F017906	YYPQAASLSAHINSNIMDTCGIEGGEKGQFDIFRNGELFLSKEDMGRFPTKEDVDAMIKELEPFSE*
LP_J_09_P20_500DRAFT_1017861	LP_J_09_P20_500DRAFT_10178612	F026401	MIKVESILKWKVEGSLLKKLKMVRAQILSKNSDAVAISDNDLHITLAAGAGWQKLRSRIKANDIDEPEFSIDIDPTVKVMEKGGSKSWYVKLKNQQDWKEYVMDSLQGTFDSGRVYHISIANLTGNKMDSVPMVEDRDYKNEYKKFQSSKKMKKYVQS*
LP_J_09_P20_500DRAFT_1017922	LP_J_09_P20_500DRAFT_10179221	F034993	IQSTSDIVFEVGSQGQGSSGMNIPISGPMFKRIWPDTIRAIVFHATDAEHLAGLKRLEGGKKSISAFFSMMANQMEGGIATDGGIVIEMEADILVSAKDDIMSRVDKGGRRWVEMSWFENAQGWGNPAGFDKVERGLNNLIRELVLKYLEPIMGNKARTEPEFYLWADMKRHLKDSKKLSLVIKDYFDGVEKVIKANKEVMSSIFYGYARSKRQTDNAWDEQIVNNIKIKKLHYLP
LP_J_09_P20_500DRAFT_1018996	LP_J_09_P20_500DRAFT_10189961	F101495	MGLPVSIDTMKSTINRHGGVARGNRFAVYISHPMKSMNNLLRFDPATFLNNAIDGQGHHAGDFINDPRDMFLLC
LP_J_09_P20_500DRAFT_1019077	LP_J_09_P20_500DRAFT_10190773	F035723	NHLRGKSKFYVAGWVANRESENPQVLPESCKGDAVVERWHEEYLSGYGDSLANGECLSAETEE*
LP_J_09_P20_500DRAFT_1019809	LP_J_09_P20_500DRAFT_10198092	F034217	MYTIPVITITTAVMADHTITTAVMADHAPNAAKSNSAMFYLLNGNKINTLEMAELHA*
LP_J_09_P20_500DRAFT_1019823	LP_J_09_P20_500DRAFT_10198232	F092360	MRTGKVHEIEWHHVQMSNTNDFLGFIQGVGYEGDREAATRFGAFCDAAQNAYVFEGNWAGTWVTNQALGWNDIQGNVNRINGFAMDPLGWATLRNKDATNSWIWSPSHHPDRLEDTSENKKDPYP
LP_J_09_P20_500DRAFT_1020026	LP_J_09_P20_500DRAFT_10200261	F003561	MNKTNGIDDNNVVNLDAFRKEKYTLYIRVGGYYANLEMGVYLHVVGITEPMHTKEAEQHFIVEDHFGNIVTFRIDDPPPDFVVSNMNEFA
LP_J_09_P20_500DRAFT_1020073	LP_J_09_P20_500DRAFT_10200731	F048371	MVMDFGKVIGMTFLTFILLSYVSFIAEWNYFMFVRMIRFFHYIDLSLEYWVFLDRYI
LP_J_09_P20_500DRAFT_1020400	LP_J_09_P20_500DRAFT_10204003	F017399	RTRLGAQSYIRSIKNYINTGDWSTMYYGEFEDQLMQWVTVAPVGE*
LP_J_09_P20_500DRAFT_1020712	LP_J_09_P20_500DRAFT_10207121	F028530	YLMNFNPLFKKTQAMEWTAYVLEAVGKAKKYNKRVFLDVGRESTAFMMEDALTQMAMNGEMAAWRVEVRLHTLQ*
LP_J_09_P20_500DRAFT_1021994	LP_J_09_P20_500DRAFT_10219942	F031645	IEKKVCLQKRICHKLAPSKDFTIMPPKLKHSAPSRIKTVPGILFNSVN*
LP_J_09_P20_500DRAFT_1022209	LP_J_09_P20_500DRAFT_10222091	F082813	MRLYFNANNKATLEALEQCGVKNVMLSHRYSYANINKFHDRFESIFVVAGTKGDPEKYHDFLKKKREYYEYATQFDVYFDMDATLKYWKQEQEMGIDWTVPVLQGNFG
LP_J_09_P20_500DRAFT_1023000	LP_J_09_P20_500DRAFT_10230001	F006551	TVESASGTIGTNGVLTDDTLRAFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGESLVQIDVNGIQSFKGTGVGIHVDSIYGIPFIPSKDAPSNASDTTEVGRLFAFDTSDAEGYGYPRIGIQIAIPTEYYEATRRSPGYPFVNNAFVEKGVFRTMGETVCRHFRSQGKIRDIKL*
LP_J_09_P20_500DRAFT_1023196	LP_J_09_P20_500DRAFT_10231963	F060128	MADDFDFGFSAVSTDEFKKAQPDTEPTPSTGVSSDEFNELKKKIDSVSSLIQTLGDKED
LP_J_09_P20_500DRAFT_1023764	LP_J_09_P20_500DRAFT_10237641	F062832	KEEEKTKGEDKKPAFLKDDEKEKAFQTSIKTGLDGLSEQLTKFAEHLQGIDSRIKALETPTDLPAAPAGTTGSDNDVGADITVPAQPYPQGHQAGLDDDRQNENAPAGDSAPSMQEKPLHKSGLVSKSQHTFTTETPRPGAAIEKAGESQTDFSPILKDARAGRL*
LP_J_09_P20_500DRAFT_1023770	LP_J_09_P20_500DRAFT_10237701	F005336	IDLAIKHDPRNKEYLKTAPEIGIGVWYKLQTDLLTKFDPAKAGKKMSLIIADYMDGVNTILKKHKKDIQGAIHGYIVRRGTVAVKHASGRMVGGDSEISEWNAWDEQVVDKIKIEKVHTFNTARREADWVKTSIIPILGKIPHKHWKSAAELSTYITQVADAEVRTFGGWARKK*
LP_J_09_P20_500DRAFT_1024565	LP_J_09_P20_500DRAFT_10245651	F004642	YDVPFWQFTMDGIQWMVLDERHGSASQFYSHYKLAKGHVICTGLGFGTREQWLASKPEVTKITVLEKFKEVIDYHKDIGTKWHDKIEIINCDANDYKGSCDFLSIDHYEYDDVLRILDSIKTVCNNITCESAWFWMLEPWIRLGYITDNTENPTIIPMKIRYGGKENDILENYSKIKTYFEHVNLPNLN
LP_J_09_P20_500DRAFT_1024933	LP_J_09_P20_500DRAFT_10249331	F035798	FRQANADLYESSKEEKLAHDVALISEAGDMCGIPLDSLRSKVMRDRHKKMCGIPKKGNPKSMWSKAAVKAAGGRGKLYNSLEEGPENIIILIQDITKQMIQALQKGDERKLNGLYKNLGKVIK*
LP_J_09_P20_500DRAFT_1025067	LP_J_09_P20_500DRAFT_10250672	F064804	YHNEKLAKARDLVIIFLFGSILIETITGIELLGAWWK*
LP_J_09_P20_500DRAFT_1025469	LP_J_09_P20_500DRAFT_10254691	F052866	XFIHAQENRGALVGAWEFKSMTTIHYSEPKQVEIIYSGENYNETLIFDQDSSFTYKGVSNGEQDNDTGSWSTENNQLIIDLKNMKTISKYKILDNVLTIIIHDMKTDEYHAFDTVLEYKKRI*
LP_J_09_P20_500DRAFT_1026091	LP_J_09_P20_500DRAFT_10260912	F020372	MNTEQETNKATIRIYIDGKEMLYSHQNIVAAINNFLPYLTNDDLDEMKKTCHTLKDHRKQKEYLSKLETLKHSWPYPDTIKQ*
LP_J_09_P20_500DRAFT_1026201	LP_J_09_P20_500DRAFT_10262011	F012354	IPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPIRFKIISRKNSNYADSVTVLNKV*
LP_J_09_P20_500DRAFT_1026624	LP_J_09_P20_500DRAFT_10266241	F089159	TYGQAGALNTGPKKEITAHGKDNRAEAKPQTTKDRDGFAVKEDIKENHVEDVIARRISQRLQLDSVKINFSAPGDSSREVGDLISFDFPTENSKVAASSGRGAGHKYYSGKFLITSLRHKITQDEYTMHVEAIKDGYKSAISSX*
LP_J_09_P20_500DRAFT_1026957	LP_J_09_P20_500DRAFT_10269572	F064789	KDSEITLDDGADIPIDPLTSQILVKYIEGLSSSEKNRTIQQIQRTERAFMKVLGKAHENT
LP_J_09_P20_500DRAFT_1027156	LP_J_09_P20_500DRAFT_10271561	F006551	GTNAGTTDFESLDRIVSSNAEETALGASTTGSYDPWAANATIDRDSSSTFDCTVESASGTIGTNGVLTDDTLRAFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIPNPYGESLVQVDVNGIQTFRGTGVGIHVDSIYGIPFIPSKDAPSDSGDSSEIGRLFAFDTSDAEGYG
LP_J_09_P20_500DRAFT_1027493	LP_J_09_P20_500DRAFT_10274931	F002715	MSEEELHAVKLEVGLLKNEVEVRGRQVDALLQKLEKTTDSLIELTVQIKTLNSRQQDHLTHDNAVRDELKLLHTRIGSLHDKLIDDHSEIEKRLDSLDQYKSKLMGMIIVVGSAVGMTGAWLLGFIKD*
LP_J_09_P20_500DRAFT_1028167	LP_J_09_P20_500DRAFT_10281671	F081441	MLMLNSREKFISFYSMFLTTHIGLGVNPAELDQDGMGNVFNAVLETVRKSACPDISEDETKAIAEDFNIEMFKIRT
LP_J_09_P20_500DRAFT_1028181	LP_J_09_P20_500DRAFT_10281811	F105359	MNNIDKIAKLIATLDNDGLNKIIPIFKQHRKTLAHATKMDLKVGMKVSWGAMGHGVVDKINRTKCVCTRNDGQKWTIPMTMLRI
LP_J_09_P20_500DRAFT_1029400	LP_J_09_P20_500DRAFT_10294001	F029559	AETATDVGVGKTLTGGVSGLCSSLTHASTRLAIASPKIQLRKLWWNLASGITHARIYFDGSDTEQTIAYLVAGNGYINYAGGGNHIGAIGMGAAAGNASNVLGDVNVTTVGVASADTYMIGIEIGKMEGFELPNFMKNGQLGYRFNQHGFSDAY*
LP_J_09_P20_500DRAFT_1029568	LP_J_09_P20_500DRAFT_10295683	F005685	MKKFNEYSSFEDKILGTLKRGPCDLMTLSHKLKEDIMPVSSMLEHLKVYDKVEMFKEKWQIKRTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000266: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_09_P20_500

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences