Sample 3300000195

3300000195: Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 150m

Overview

Basic Information
IMG/M Taxon OID	3300000195 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0054199 \| Ga0026194
Sample Name	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 150m
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	70968149
Sequencing Scaffolds	43
Novel Protein Genes	45
Associated Families	41

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2
All Organisms → Viruses → Predicted Viral	5
Not Available	20
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED277	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1
All Organisms → Viruses → environmental samples → uncultured marine virus	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → coastal inlet → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Saanich Inlet 39, Vancouver Island, BC, Canada
Coordinates	Lat. (^o)	48.35	Long. (^o)	-123.29	Alt. (m)	N/A	Depth (m)	150
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001066	Metagenome / Metatranscriptome	788	Y
F004439	Metagenome	438	Y
F007697	Metagenome	346	N
F011190	Metagenome / Metatranscriptome	294	Y
F013943	Metagenome	267	Y
F015265	Metagenome / Metatranscriptome	256	Y
F017326	Metagenome / Metatranscriptome	241	N
F019751	Metagenome / Metatranscriptome	228	N
F022202	Metagenome / Metatranscriptome	215	N
F022750	Metagenome / Metatranscriptome	213	Y
F023708	Metagenome	209	Y
F029271	Metagenome / Metatranscriptome	189	N
F033048	Metagenome / Metatranscriptome	178	Y
F034394	Metagenome	175	Y
F034764	Metagenome / Metatranscriptome	174	Y
F035724	Metagenome	171	Y
F036272	Metagenome	170	Y
F043978	Metagenome	155	Y
F044162	Metagenome / Metatranscriptome	155	N
F050004	Metagenome / Metatranscriptome	146	Y
F051972	Metagenome	143	N
F055778	Metagenome / Metatranscriptome	138	Y
F058066	Metagenome	135	Y
F058432	Metagenome	135	N
F058538	Metagenome / Metatranscriptome	135	N
F060433	Metagenome	133	Y
F061863	Metagenome / Metatranscriptome	131	Y
F062183	Metagenome / Metatranscriptome	131	Y
F063080	Metagenome / Metatranscriptome	130	N
F066454	Metagenome / Metatranscriptome	126	N
F067831	Metagenome	125	N
F068917	Metagenome	124	N
F072433	Metagenome / Metatranscriptome	121	Y
F072857	Metagenome	121	N
F076178	Metagenome / Metatranscriptome	118	Y
F080898	Metagenome / Metatranscriptome	114	N
F093699	Metagenome / Metatranscriptome	106	N
F093903	Metagenome / Metatranscriptome	106	N
F100885	Metagenome / Metatranscriptome	102	N
F102126	Metagenome / Metatranscriptome	102	N
F105334	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
SI39nov08_150mDRAFT_c1000558	All Organisms → cellular organisms → Archaea	6732	Open in IMG/M
SI39nov08_150mDRAFT_c1001846	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3430	Open in IMG/M
SI39nov08_150mDRAFT_c1004547	All Organisms → Viruses → Predicted Viral	1986	Open in IMG/M
SI39nov08_150mDRAFT_c1004841	All Organisms → Viruses → Predicted Viral	1903	Open in IMG/M
SI39nov08_150mDRAFT_c1005029	All Organisms → Viruses → Predicted Viral	1862	Open in IMG/M
SI39nov08_150mDRAFT_c1005221	Not Available	1818	Open in IMG/M
SI39nov08_150mDRAFT_c1006126	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED277	1620	Open in IMG/M
SI39nov08_150mDRAFT_c1006281	All Organisms → Viruses → Predicted Viral	1592	Open in IMG/M
SI39nov08_150mDRAFT_c1006651	Not Available	1528	Open in IMG/M
SI39nov08_150mDRAFT_c1006702	All Organisms → Viruses → Predicted Viral	1520	Open in IMG/M
SI39nov08_150mDRAFT_c1006833	Not Available	1502	Open in IMG/M
SI39nov08_150mDRAFT_c1007111	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1467	Open in IMG/M
SI39nov08_150mDRAFT_c1007447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1425	Open in IMG/M
SI39nov08_150mDRAFT_c1007558	All Organisms → cellular organisms → Archaea	1413	Open in IMG/M
SI39nov08_150mDRAFT_c1007807	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1385	Open in IMG/M
SI39nov08_150mDRAFT_c1007973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1367	Open in IMG/M
SI39nov08_150mDRAFT_c1008793	All Organisms → Viruses → environmental samples → uncultured marine virus	1278	Open in IMG/M
SI39nov08_150mDRAFT_c1008985	Not Available	1260	Open in IMG/M
SI39nov08_150mDRAFT_c1008990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1259	Open in IMG/M
SI39nov08_150mDRAFT_c1009904	Not Available	1180	Open in IMG/M
SI39nov08_150mDRAFT_c1013114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	964	Open in IMG/M
SI39nov08_150mDRAFT_c1013749	Not Available	935	Open in IMG/M
SI39nov08_150mDRAFT_c1014580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	899	Open in IMG/M
SI39nov08_150mDRAFT_c1014699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	894	Open in IMG/M
SI39nov08_150mDRAFT_c1017818	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
SI39nov08_150mDRAFT_c1018101	Not Available	776	Open in IMG/M
SI39nov08_150mDRAFT_c1018701	Not Available	759	Open in IMG/M
SI39nov08_150mDRAFT_c1021403	Not Available	693	Open in IMG/M
SI39nov08_150mDRAFT_c1021703	Not Available	687	Open in IMG/M
SI39nov08_150mDRAFT_c1022820	All Organisms → Viruses → environmental samples → uncultured marine virus	664	Open in IMG/M
SI39nov08_150mDRAFT_c1024918	Not Available	627	Open in IMG/M
SI39nov08_150mDRAFT_c1025491	Not Available	617	Open in IMG/M
SI39nov08_150mDRAFT_c1025677	Not Available	615	Open in IMG/M
SI39nov08_150mDRAFT_c1025995	Not Available	610	Open in IMG/M
SI39nov08_150mDRAFT_c1026605	Not Available	600	Open in IMG/M
SI39nov08_150mDRAFT_c1027901	Not Available	581	Open in IMG/M
SI39nov08_150mDRAFT_c1030536	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	548	Open in IMG/M
SI39nov08_150mDRAFT_c1031658	Not Available	535	Open in IMG/M
SI39nov08_150mDRAFT_c1031790	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	533	Open in IMG/M
SI39nov08_150mDRAFT_c1032243	All Organisms → Viruses → environmental samples → uncultured marine virus	528	Open in IMG/M
SI39nov08_150mDRAFT_c1032716	Not Available	523	Open in IMG/M
SI39nov08_150mDRAFT_c1034568	Not Available	505	Open in IMG/M
SI39nov08_150mDRAFT_c1034955	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
SI39nov08_150mDRAFT_c1000558	SI39nov08_150mDRAFT_10005581	F068917	IDKHGTMESVNEKISKEEWAQYPAYARKLKPYMQKLLKVPLKVRVIKQANHNPWIEVRVAKFGKDIIPNDFRVKVAKSIGASAVRDWDDVTYGTIRSNSIDLRYEQWVKIIGDLK*
SI39nov08_150mDRAFT_c1001846	SI39nov08_150mDRAFT_10018461	F055778	NNVDFPEPELPTIKTTSPCSIEKDTSSRAFTLLSPSP*
SI39nov08_150mDRAFT_c1004547	SI39nov08_150mDRAFT_10045475	F058066	TDEASRLATQRWDNVLNEILYGLKCAKKIQNSDFDYNDKKLTKKLNNSSTRSFELIGKHLFNLWD*
SI39nov08_150mDRAFT_c1004841	SI39nov08_150mDRAFT_10048413	F007697	GILTAAGISSPQSCITSAVAKYFGLKCLVTVPHYPDHIKDSYRVNVSLAQKFGAKVYGVGNQNISGPELDAKKLVGETGYFQIKFGMNGRQVMKTIAQQVKNVPDHVETVVGIAGSGLSMLGVAMGCKLYNKNIKTIYPVALSGYVYKNKKMWYDRLNDRHKFDGDFKVVQSDYPYQHKLKLDESLPLDQTYEAKAWDWMVKNIEPSENVLFWDVGIKEYDLSYIEPIKWHKSEYEMIIDRELRRKHEQVKHNFF*
SI39nov08_150mDRAFT_c1005029	SI39nov08_150mDRAFT_10050293	F019751	VNSTLTRTRGPELSKDFKNYIFNQWMFFGKNAYQITEGINKDTKLMSQFGKTTPAGVHYHIKNIEKDLEDTISEDAMDTYIGEFIRARTGFENDVADVEDLMVHEKDKGLDDMDKELYLKLSRFRHEIKLDSFKMLQDSALPLQVKKLKMERNKL
SI39nov08_150mDRAFT_c1005221	SI39nov08_150mDRAFT_10052213	F029271	MSKLSDLQEIKKLLDVDFRKDKFLYNQYNNSPCFNYDAAESYVANIHQFLSEKYGEAVIYNFIQEVESLRITTLKMYIESNIAAYRRFTIKTIDDSNKSYYSXLTVKNM*
SI39nov08_150mDRAFT_c1006126	SI39nov08_150mDRAFT_10061264	F067831	MKLNYFSFNNYSSSIVTQSLQAAAPFLTGSNPEYWSGKGDNYGVIAGYDWVPSSGSLKLLELNTNIQTPPETNFLDSAVTWWKANNYDTIVLVTRNEEGTVMPPLGLVGDITASLDIDGFTSSIYVQPSYPTPVPDFDVPNTTFVLRFGFDSASPIDYLASDKREFRNFASSSGIESLMPRKMADLPDGFSNGVGVPDVLIKDPTVDYQTLLMNSFQFYDITDDNKNYLLSQXYCEEFIXPDLNYNGAYYSEVRGIVMLTPQENIFLQPRGSIT
SI39nov08_150mDRAFT_c1006281	SI39nov08_150mDRAFT_10062811	F102126	KWMGKKGKDIQLGKDAERFVNDPLYKTAFAETKEELIKMLLQTKISEETERDRIYITIKALGLIDEHIQSVINTGKLAEGQQEFYSEHY*
SI39nov08_150mDRAFT_c1006651	SI39nov08_150mDRAFT_10066511	F063080	ALIISPKKIVAPIVIKIGFEKLIAVAWASGIRVKQVKPASIPIAPKKPLIKNNFVLFIFIAARPVECNIGSITIKAKRFLKKTTSRMCKFSDAFLIKITIIEKQTIDKIFKMIALVCEFCNLKNRIILTIMVSFPLCIHS*
SI39nov08_150mDRAFT_c1006702	SI39nov08_150mDRAFT_10067021	F058432	MNDIKFGWDYWDYSRQPDIRKIIKKDFNGFSPDGVYPNDSDTLPLFDSNYQPTNAWHNIYNILQHHYDGYTELENKDTTEYIKNNETFIYVIATNGGPVTWCGGDTERNTLFHNIKEHTKEYIRKGKVLVTIDLSFEGFPINGEDKLSILDMGKHPNLAEVVHRRAKEEKFPIENIVFLSANYKDVEYYKNWCKRNKIETPMNWVLLDWCQRAISSDYKHLTDRFEDHFNYKKDNLDKMKHYLCLCRRLKTPRVFHHMALNYFNLLDKGSVSCILPRREISHLFPELNIDKSKMEMDHAGTKTFSDCANLEDYEFNKTLKDNEIL
SI39nov08_150mDRAFT_c1006833	SI39nov08_150mDRAFT_10068333	F076178	EVASSTTFHATGSNSGAGFIVENATNVVIHCASGGTLDTDQITTKTLYPIGVRKVVIGSTGVVHVLHR*
SI39nov08_150mDRAFT_c1007111	SI39nov08_150mDRAFT_10071115	F015265	DHMTKNPKLIETNAIVNLNNVGLPVFLNPIYAIIPMASPTKNPTRFSIFSNKNSNGV*
SI39nov08_150mDRAFT_c1007447	SI39nov08_150mDRAFT_10074474	F044162	MLKKLILLIIIGAIGWYAYNHYMKSEIDNAKDTTEEVAEE
SI39nov08_150mDRAFT_c1007558	SI39nov08_150mDRAFT_10075582	F013943	GHGTGLGEIGDGWPDGLYTKRGERRVVGPASLTRGMTQIDFPASDNIYGGNGSLNNLKRAERDKAMVYRYLSGPEEYASIMANELRDDTPPLAPKQRMYGIHGFHRKQEYTIPPETSNFHSTSETLIKPTTPPEGTKSGGIDPTPEPGSKEMGSASGYRQVQKGGQSIFAKNEKLWGKWVDHRIGGRVDSREWKGNKLVDLLPKGKK*
SI39nov08_150mDRAFT_c1007807	SI39nov08_150mDRAFT_10078072	F066454	MSIRLDVLILINSGVTDRSEIMERLGINIMSVSNCFRFLIKEGWVEYSREPVSAVGSVGYRITQVGIDKIKASTVDEYRQSPKRKIPDYEVMRSHLGVGDDVTRSELINLWNELTDYYLPYEGDKEFTGSNDFFSL*
SI39nov08_150mDRAFT_c1007973	SI39nov08_150mDRAFT_10079731	F093903	MRLIPLGIITFLLGGCFFQPVEDFVDQMDDQYFADEFNYIPTEIKPYDKKASMELIWENKVGDNEVNNFNLVFSEEFVIAATSDGSV
SI39nov08_150mDRAFT_c1008793	SI39nov08_150mDRAFT_10087933	F050004	MVLYLKMDQKTWATGDFTNSATYDLSGTVYDENTLTTARNISSFTGTLRLINQDGDSVFSTTENLTLGTDGTILIKFAXGKTPVLQGIFKVRLRLEVSGTRLTCVGVNGSDEVYFEYD*
SI39nov08_150mDRAFT_c1008985	SI39nov08_150mDRAFT_10089851	F036272	GKEAGKETYEGELIDYLNKPYYIGVGDPNINVWRNFLKGNVSEVGLWNDTIKDYEMELIFNKGIVNNRGEYTTSTLPVGVWDFKGGYDNITFDITGNGNHARFYNVGFENKTLKNKTERYLPYRRNGYYGYISPKEDFSNLENMMRSEHPEIMTNRNLFNKKIRNNMDDMDKDGLSSTRFRIVNRQSYQEKHEVIEVVI*
SI39nov08_150mDRAFT_c1008990	SI39nov08_150mDRAFT_10089901	F093699	MGIRDSLSGLRKALTPVNKGYTDATTRPSIAQPYMSTDTGAKLPIFPFPLIMIYELADNIDAIRIPIETLNREMFKNGFEIVERFKYKCENCAKTFQYAPNIHDESEDKIDMKKVQCDSCGSYDMRRPVPEHRKILEDIMSKPVNGNMQNMEDLSRQLERDLEIADNAYMLLLKNYFIDDISGEIDPHK
SI39nov08_150mDRAFT_c1009904	SI39nov08_150mDRAFT_10099041	F068917	QFKSEKDAKNQLNGLDWQFRGNYKIVKLKESVNEKISKDEWSEYPKYARKLKPYMKRLLKVPVKVRVIKQANHNPWIEVRVARFGKDVIPNDFRLKAAKVIGATSIKDKSNVNYGNIRSNSVSMKHDQWVKLLGRKV*
SI39nov08_150mDRAFT_c1011223	SI39nov08_150mDRAFT_10112233	F034394	MVTTTTYCSVNDIIDFLRVPITSTTTPNKEMVRKIIARKEEELDRRIGHTWKTKKITREIHDLPLLYTFGWGTPLFLQHRNILELDVDEGDKIEIWKGESNEWENIINSPQWYHAEYEYGRIYVRGFLFTILRKNRVRVTYRYGGENYAGDTVIPPDITDAVIKMAAIDIMNTSFRMDEIPSGGSV
SI39nov08_150mDRAFT_c1013114	SI39nov08_150mDRAFT_10131142	F034764	MIMIQNTSNKPPYVFVPVEYPELAEGEEIQPYQPGFICVEWLELEIIEPSEYN*
SI39nov08_150mDRAFT_c1013749	SI39nov08_150mDRAFT_10137492	F035724	MGEWGNAMRFDYPTVVSATTSLVFNNNPESPYEREVIKHNSSVQMEDGSMYVYSRSVTNYRYSISVVLTSESERDALESFYDSTVNGAEKTFEYTDPYGDVYTVRFDESMRISEIFKDRLYRATFTLLQTA*
SI39nov08_150mDRAFT_c1014580	SI39nov08_150mDRAFT_10145801	F022202	MNNKEQKILQDWIDTLQGIATKGMDAKTRIEARLLRGAWITENKRIENEIPEHDESFYQNVKEAIAKKKVKGSPKNIWTSFFENKFKAFVIVLLGTGFVYASKKTYEGVVSVADELNHIVLAKE
SI39nov08_150mDRAFT_c1014699	SI39nov08_150mDRAFT_10146991	F060433	SSILEPLLLAALIGMGSGLFAFFRKMSNTQSDLCETVQRLQKTLIILAKTVDRQSNRLHPKEADSELDDLVKELLDK*
SI39nov08_150mDRAFT_c1017818	SI39nov08_150mDRAFT_10178181	F058538	RGRNMYSQYETTVINRRRLHDILNWVNQKYHLEYEVVQKNRDVFYVIFHDLNIKQTVAIQKQIKGIAQPEHFDMH*
SI39nov08_150mDRAFT_c1018101	SI39nov08_150mDRAFT_10181011	F035724	TSLAFTNDPESPYERAVIKHNSSVQMEDGSMYVYSRSVTNYRYSISVVLTAESERDALESFYDSTVNGAEKTFEYTDPYGDVYTVRFDENMRISEIYKDRLYRATFTLLQTA*
SI39nov08_150mDRAFT_c1018701	SI39nov08_150mDRAFT_10187012	F001066	MDKNDKIFKIKPIGNKNIVVEDKRKTISPFNSAKHFKDANIPALCDQCAYRSIDGGGNGKCPKYEEGAVCGIRKDFISFINELDTRNPEDLKGMIDMVAKLTFENVLMTLTQAKFDGNVPDRNSKSEINTLLNIVKSMNDLNSKITITEKKEFTKEGDISNIFRQIKAQKSG
SI39nov08_150mDRAFT_c1021403	SI39nov08_150mDRAFT_10214031	F004439	PRIGYYDQLMIPISSSMFKRIWPDTLRATVFHTTDGDGVRNIAKLQGKKKQISAFFSMFSRYMEVGVATQGGVHSVLEMDADVLLSAKGDVMSHLDQNGRRWTSISDLKETSRWTKFTAVEKDLEKMFDALVKKYLKRGEFQENATVWELWRMAXRKVDGKTMSLIIKDYMDGMEKVIKKNIDTFENAMLSYAKKRSTDLSWDEQIVNNFKVKTAHFFKLKLKIAQTEKE
SI39nov08_150mDRAFT_c1021703	SI39nov08_150mDRAFT_10217031	F105334	MTKVAFHRAGIPFFDRDTFLTPFDKIFDQMIGSQFPDITKSVGVNPY
SI39nov08_150mDRAFT_c1022820	SI39nov08_150mDRAFT_10228201	F100885	MAERIAGIALMPRQSRNGVYYDTEELKKFDGKTVPLRVEHNKETHIGQVTFSFDEEKSQVKYEATVFDSEWQKTLENEQYQVSIGASVLEQRTLCDEMKAKCLNAPVLDEILELSVVRTPGIPESTLHVVESHNAQYIKILNEQEV
SI39nov08_150mDRAFT_c1024918	SI39nov08_150mDRAFT_10249181	F051972	MASPIYYFTRSGCAWCTRMQPSIEHINKTLNDEQKIQILNVDDKKSRVIYDTILTSNKLRAITPMLYNSNIGTFLLGYQDKRNVEQFLKANPLKERKPLKPIPTFDIQNSSKKDFDNWKKSVILWYGENQKDLPXNVISQERMIDMVYTQFMAYRTKPLTIEDRLSKLEEQSHEPQNYREECKMMNKELKILKLQIKKLKR
SI39nov08_150mDRAFT_c1025491	SI39nov08_150mDRAFT_10254912	F017326	MIMNDYEKVQIEINESITSDNFKEHLRKNYHNSYDEYESDTRHIDLDVYYEKNSIPLSELIPFGMTIKKYFSKEERLNRGENISYVKFD*
SI39nov08_150mDRAFT_c1025677	SI39nov08_150mDRAFT_10256772	F062183	MRWSYDEEFEYIVPSGKPLTVAWNMDEDDVEISAIYWEDKKEQSHYTGDELWEMDSNLAEDIMSYIEDIFLHSEDFWLTKLGYD
SI39nov08_150mDRAFT_c1025995	SI39nov08_150mDRAFT_10259951	F029271	MSKLSDLQDIKELLDVDFRKDKFLDNQYNNSPCFNYDAAESYVANIHQFLSEKYGEAVIYNFMQEVESLRITTLKMYIESNIASY
SI39nov08_150mDRAFT_c1026605	SI39nov08_150mDRAFT_10266051	F072857	GNYYGINSCKDLLNIEVTDTVDDELLNRFGAVANQHIDNILKQHDERIPLKVPSILADVKMSANYYVCSLFRGKRGDNDTAKFWKDMFIDTINGIIEERSIEGLSYDVQRFNDRYRQEDVYRLW*
SI39nov08_150mDRAFT_c1027901	SI39nov08_150mDRAFT_10279011	F061863	FKFIIIIYIYIIIMKIDTNLLIQTSIASCLVIFGVVTKNSSEQLGFPNHPIGKPLGMGMFIMGWIYTAYIFSINKPNKLAFILPSIGIVIAVMMMKQYMVKKQTPPMVFPVIFALSWIILGLNAGNHLSGNQKYLGLFASFLVLLSMMQILPYQRTHNIVDGPGQPLFVIAWGILIMLNSNR*
SI39nov08_150mDRAFT_c1030536	SI39nov08_150mDRAFT_10305361	F072433	IHLEPISDIHIGHAGFDEEHYKKRIKAICRDKNRYTFFGGDALDAITTYDKRFNPDMSLEHDIDNQRMRWQNLTQKLLDIHATQKNEKVWGFFHGNHD
SI39nov08_150mDRAFT_c1031658	SI39nov08_150mDRAFT_10316581	F022750	MWVSMAFHLGTQEADGEYVVLQHNDTFYHQDCIDEMIQQMEEEELEYISVDNKKIWISTYLLNKDFLDKYIKEYSQQPVIIRPENGGYIKTKKIGFADAYFFLSKRKFFDIYDIDWRYGDTNHGATIYCLENDLKYLHLGPYYDNPNWETEDTLHTYFYKDKPFLTHLKGGFSENKMS
SI39nov08_150mDRAFT_c1031790	SI39nov08_150mDRAFT_10317901	F043978	MISFIIPFSTIEKDKFLNLNEKEDLWEENNTANIVYSTIKTIKNINSLKCEKEILLVDNSHTWPEIKLPNVRVIKGWQALPLKELEKIPEYMNHRDIQLSLDNLGCLTMWVSMAFHLGTQEADGEYVVLQ
SI39nov08_150mDRAFT_c1032243	SI39nov08_150mDRAFT_10322431	F011190	LQYYSNISMGIVSNFIKGLKKSFNGKDYLRDINKCDKCGKPSFFSSCLKCETDEAYRGWNKKQLRD*
SI39nov08_150mDRAFT_c1032716	SI39nov08_150mDRAFT_10327161	F058066	WDNVLNEILYGLKCAKKLQDMDYDYKDKEEVKKLTQSSRRSFELIGKHLFNLWD*
SI39nov08_150mDRAFT_c1032716	SI39nov08_150mDRAFT_10327162	F033048	MIDKTIKLAGEYPSDFKPTPTVLEIHQYFNAHSFHNGRMIGGSKSVYRNMHPDDLIIFNANVLMPGYGKVWYGDLNLTEDYLVLREIAQNLNTDLYVLWESDGRFGDEN
SI39nov08_150mDRAFT_c1034568	SI39nov08_150mDRAFT_10345681	F023708	VISLKSLLKNLKEAQLTMPTKGRETPLDAKVQIPGYGVMTRRQLQKSIQRFVKEVSKYVRNGDVERAHSALYTRNA
SI39nov08_150mDRAFT_c1034955	SI39nov08_150mDRAFT_10349551	F080898	ISSLLPTILSRCVMFKAPTPSADDAKSFLKSEGYENLSSQLPLFSNLPLDVIAHQSDSDLFTKMINEFNKGGDFELMAIEPKWLNGDFKETISLFQKWLYDIFLFKMTRKYHFFESKKENIKKLSDAADITKLINLLKSVNNIKYISNKPINKDISFDNLMVEYRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000195: Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 150m

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences